Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22525 Sequoiadendron giganteum HOM05D000400 ORTHO05D001199 5.6e-33 143.7 71 100.0
SEGI_20687 Sequoiadendron giganteum HOM05D000400 ORTHO05D001199 6.8e-31 136.7 69 97.1
SEGI_39533 Sequoiadendron giganteum HOM05D000400 ORTHO05D001199 1.4e-23 112.5 71 83.1
SEGI_18513 Sequoiadendron giganteum HOM05D000400 ORTHO05D001199 2.3e-18 95.1 70 67.1
SEGI_35490 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 8.6e-18 93.2 66 66.7
ATR0681G263 Amborella trichopoda HOM05D000400 ORTHO05D001199 9.2e-12 73.2 65 49.2
SEGI_04362 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 3.5e-11 71.2 65 46.2
SEGI_05888 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 6.0e-11 70.5 64 48.4
SEGI_29092 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 6.0e-11 70.5 64 48.4
Aqoxy7G02358 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 1.0e-10 69.7 67 47.8
SEGI_28964 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 1.0e-10 69.7 64 46.9
Aqoxy5G01287 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 3.0e-10 68.2 65 46.2
Aqoxy7G02478 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 6.6e-10 67.0 67 44.8
Nn5g30200 Nelumbo nucifera HOM05D000400 ORTHO05D001199 6.6e-10 67.0 69 40.6
Ciclev10015143m.g Citrus clementina HOM05D000400 ORTHO05D001199 2.5e-09 65.1 69 40.6
QL10p003952 Quercus lobata HOM05D000400 ORTHO05D001199 2.5e-09 65.1 68 38.2
RcHm_v2.0_Chr1g0350141 Rosa chinensis HOM05D000400 ORTHO05D001199 2.5e-09 65.1 68 42.6
CsaV3_7G005900 Cucumis sativus L. HOM05D000400 ORTHO05D001199 3.3e-09 64.7 66 42.4
MELO3C018703.2 Cucumis melo HOM05D000400 ORTHO05D001199 5.6e-09 63.9 66 42.4
PSO541G4080 Papaver somniferum HOM05D000400 ORTHO05D001199 5.6e-09 63.9 67 46.3
PSO675G6786 Papaver somniferum HOM05D000400 ORTHO05D001199 5.6e-09 63.9 67 46.3
PSO541G4669 Papaver somniferum HOM05D000400 ORTHO05D001199 7.3e-09 63.5 64 46.9
PSO675G5540 Papaver somniferum HOM05D000400 ORTHO05D001199 7.3e-09 63.5 64 46.9
Aqoxy5G01285 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 9.5e-09 63.2 68 42.6
AUR62013430 Chenopodium quinoa HOM05D000400 ORTHO05D001199 9.5e-09 63.2 67 43.3
Ciclev10015126m.g Citrus clementina HOM05D000400 ORTHO05D001199 9.5e-09 63.2 61 45.9
MBI02_g23558_MAGBIO Magnolia biondii HOM05D000400 ORTHO05D001199 9.5e-09 63.2 63 42.9
Nn1g06505 Nelumbo nucifera HOM05D000400 ORTHO05D001199 9.5e-09 63.2 66 40.9
PSO210G2585 Papaver somniferum HOM05D000400 ORTHO05D001199 9.5e-09 63.2 67 41.8
AUR62007713 Chenopodium quinoa HOM05D000400 ORTHO05D001199 1.6e-08 62.4 67 43.3
CsaV3_7G005930 Cucumis sativus L. HOM05D000400 ORTHO05D001199 1.6e-08 62.4 63 41.3
Sed0002925 Sechium edule HOM05D000400 ORTHO05D001199 1.6e-08 62.4 62 41.9
MSTRG.15774 Avicennia marina HOM05D000400 ORTHO05D001199 2.1e-08 62.0 67 46.3
MD10G1159200 Malus domestica HOM05D000400 ORTHO05D001199 2.1e-08 62.0 70 38.6
SalBow7G0582 Salvia bowleyana HOM05D000400 ORTHO05D001199 2.1e-08 62.0 67 40.3
SalBow7G2509 Salvia bowleyana HOM05D000400 ORTHO05D001199 2.1e-08 62.0 67 40.3
MD10G1159400 Malus domestica HOM05D000400 ORTHO05D001199 2.8e-08 61.6 62 43.5
PSO447G0337 Papaver somniferum HOM05D000400 ORTHO05D001199 2.8e-08 61.6 67 40.3
SEGI_13754 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 2.8e-08 61.6 65 41.5
MBI02_g23559_MAGBIO Magnolia biondii HOM05D000400 ORTHO05D001199 3.6e-08 61.2 63 42.9
RcHm_v2.0_Chr5g0050931 Rosa chinensis HOM05D000400 ORTHO05D001199 3.6e-08 61.2 68 36.8
Aqoxy5G01286 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 4.7e-08 60.8 64 40.6
Aqoxy5G01291 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 4.7e-08 60.8 66 45.5
MELO3C018692.2 Cucumis melo HOM05D000400 ORTHO05D001199 4.7e-08 60.8 64 40.6
MD10G1158900 Malus domestica HOM05D000400 ORTHO05D001199 8.1e-08 60.1 69 37.7
Oeu035625.1 Olea europaea HOM05D000400 ORTHO05D001199 8.1e-08 60.1 67 38.8
Aqoxy5G01283 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 1.4e-07 59.3 66 42.4
DCAR_016940 Daucus carota HOM05D000400 ORTHO05D001199 1.4e-07 59.3 63 42.9
Potri.013G085101 Populus trichocarpa HOM05D000400 ORTHO05D001199 1.4e-07 59.3 67 40.3
Potri.017G010500 Populus trichocarpa HOM05D000400 ORTHO05D001199 1.4e-07 59.3 63 41.3
QL08p039383 Quercus lobata HOM05D000400 ORTHO05D001199 1.4e-07 59.3 70 32.9
QL08p039471 Quercus lobata HOM05D000400 ORTHO05D001199 1.4e-07 59.3 70 32.9
Aqoxy5G01289 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 1.8e-07 58.9 66 42.4
CsaV3_7G005920 Cucumis sativus L. HOM05D000400 ORTHO05D001199 1.8e-07 58.9 67 38.8
Nn1g06506 Nelumbo nucifera HOM05D000400 ORTHO05D001199 1.8e-07 58.9 58 46.6
Oeu023569.2 Olea europaea HOM05D000400 ORTHO05D001199 1.8e-07 58.9 67 37.3
Oeu044721.1 Olea europaea HOM05D000400 ORTHO05D001199 1.8e-07 58.9 67 40.3
SalBow7G2836 Salvia bowleyana HOM05D000400 ORTHO05D001199 1.8e-07 58.9 67 37.3
Sed0016643 Sechium edule HOM05D000400 ORTHO05D001199 1.8e-07 58.9 60 43.3
AUR62042883 Chenopodium quinoa HOM05D000400 ORTHO05D001199 2.4e-07 58.5 67 43.3
FAN02G3548 Fragaria x ananassa HOM05D000400 ORTHO05D001199 2.4e-07 58.5 66 39.4
Gohir.D04G142500 Gossypium hirsutum HOM05D000400 ORTHO05D001199 2.4e-07 58.5 68 39.7
Gorai.012G127800 Gossypium raimondii HOM05D000400 ORTHO05D001199 2.4e-07 58.5 68 39.7
Sabra16G0112800 Salix brachista HOM05D000400 ORTHO05D001199 2.4e-07 58.5 63 39.7
unitig_62.g23324 Utricularia gibba HOM05D000400 ORTHO05D001199 2.4e-07 58.5 70 40.0
Atru.chr6.2903 Acer truncatum HOM05D000400 ORTHO05D001199 3.1e-07 58.2 70 35.7
arahy.Tifrunner.gnm1.ann1.7FM3IX Arachis hypogaea HOM05D000400 ORTHO05D001199 3.1e-07 58.2 69 40.6
arahy.Tifrunner.gnm1.ann1.FEHL2J Arachis hypogaea HOM05D000400 ORTHO05D001199 3.1e-07 58.2 69 40.6
FvH4_3g28230 Fragaria vesca HOM05D000400 ORTHO05D001199 3.1e-07 58.2 66 39.4
Lj1A714T23 Lonicera japonica HOM05D000400 ORTHO05D001199 3.1e-07 58.2 66 31.8
Prupe.3G141300 Prunus persica HOM05D000400 ORTHO05D001199 4.0e-07 57.8 67 40.3
Aqoxy3G03305 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 5.2e-07 57.4 66 40.9
arahy.Tifrunner.gnm1.ann1.93IDVA Arachis hypogaea HOM05D000400 ORTHO05D001199 5.2e-07 57.4 69 40.6
Cpa.g.sc83.49 Carica papaya HOM05D000400 ORTHO05D001199 5.2e-07 57.4 66 39.4
AUR62007709 Chenopodium quinoa HOM05D000400 ORTHO05D001199 5.2e-07 57.4 68 38.2
ClCG09G011450 Citrullus lanatus HOM05D000400 ORTHO05D001199 5.2e-07 57.4 70 31.4
Aqoxy1G02494_Aqoxy1G02495 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 6.8e-07 57.0 66 40.9
MELO3C018693.2 Cucumis melo HOM05D000400 ORTHO05D001199 6.8e-07 57.0 68 35.3
Glyma.18G257900 Glycine max HOM05D000400 ORTHO05D001199 6.8e-07 57.0 67 34.3
Hund07923 Selenicereus undatus HOM05D000400 ORTHO05D001199 6.8e-07 57.0 68 38.2
unitig_747.g21630 Utricularia gibba HOM05D000400 ORTHO05D001199 6.8e-07 57.0 67 37.3
CsaV3_7G005960 Cucumis sativus L. HOM05D000400 ORTHO05D001199 8.9e-07 56.6 68 33.8
DCAR_014803 Daucus carota HOM05D000400 ORTHO05D001199 8.9e-07 56.6 67 38.8
Prupe.4G257800 Prunus persica HOM05D000400 ORTHO05D001199 8.9e-07 56.6 70 41.4
RcHm_v2.0_Chr5g0051001 Rosa chinensis HOM05D000400 ORTHO05D001199 8.9e-07 56.6 68 36.8
Sabra17G0010000 Salix brachista HOM05D000400 ORTHO05D001199 8.9e-07 56.6 67 40.3
arahy.Tifrunner.gnm1.ann1.8ZX8LU Arachis hypogaea HOM05D000400 ORTHO05D001199 1.2e-06 56.2 68 38.2
arahy.Tifrunner.gnm1.ann1.I2W0TQ Arachis hypogaea HOM05D000400 ORTHO05D001199 1.2e-06 56.2 68 38.2
arahy.Tifrunner.gnm1.ann1.J3RNWS Arachis hypogaea HOM05D000400 ORTHO05D001199 1.2e-06 56.2 71 38.0
AUR62013432 Chenopodium quinoa HOM05D000400 ORTHO05D001199 1.2e-06 56.2 68 38.2
AUR62036967 Chenopodium quinoa HOM05D000400 ORTHO05D001199 1.2e-06 56.2 67 40.3
AUR62043823 Chenopodium quinoa HOM05D000400 ORTHO05D001199 1.2e-06 56.2 67 41.8
Nn1g04125 Nelumbo nucifera HOM05D000400 ORTHO05D001199 1.2e-06 56.2 66 42.4
Ah.05g169100 Amaranthus hybridus HOM05D000400 ORTHO05D001199 1.5e-06 55.8 67 40.3
Aqoxy1G02385 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 1.5e-06 55.8 66 37.9
MBI07_g30193_MAGBIO Magnolia biondii HOM05D000400 ORTHO05D001199 1.5e-06 55.8 67 37.3
Potri.017G010700 Populus trichocarpa HOM05D000400 ORTHO05D001199 1.5e-06 55.8 67 38.8
SEGI_08125 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 1.5e-06 55.8 67 40.3
CSS0011552 Camellia sinensis var. sinensis HOM05D000400 ORTHO05D001199 2.0e-06 55.5 67 38.8
CSS0020603 Camellia sinensis var. sinensis HOM05D000400 ORTHO05D001199 2.0e-06 55.5 67 38.8
CSS0049543 Camellia sinensis var. sinensis HOM05D000400 ORTHO05D001199 2.0e-06 55.5 67 38.8
Cpa.g.sc83.51 Carica papaya HOM05D000400 ORTHO05D001199 2.0e-06 55.5 67 38.8
Migut.M00281 Erythranthe guttata HOM05D000400 ORTHO05D001199 2.0e-06 55.5 67 37.3
Glyma.18G258100 Glycine max HOM05D000400 ORTHO05D001199 2.0e-06 55.5 69 33.3
Sc21g0002990 Simmondsia chinensis HOM05D000400 ORTHO05D001199 2.0e-06 55.5 67 38.8
Aqoxy5G01288 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 2.6e-06 55.1 66 40.9
Aqoxy5G01292 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 2.6e-06 55.1 68 38.2
arahy.Tifrunner.gnm1.ann1.3TU0XK Arachis hypogaea HOM05D000400 ORTHO05D001199 2.6e-06 55.1 71 40.8
arahy.Tifrunner.gnm1.ann1.EG0P80 Arachis hypogaea HOM05D000400 ORTHO05D001199 2.6e-06 55.1 67 34.3
arahy.Tifrunner.gnm1.ann1.NGIU7P Arachis hypogaea HOM05D000400 ORTHO05D001199 2.6e-06 55.1 71 40.8
COL.COLO4_36346 Corchorus olitorius HOM05D000400 ORTHO05D001199 2.6e-06 55.1 70 32.9
Migut.M00289 Erythranthe guttata HOM05D000400 ORTHO05D001199 2.6e-06 55.1 67 37.3
FAN11G3313 Fragaria x ananassa HOM05D000400 ORTHO05D001199 2.6e-06 55.1 61 37.7
Oeu017959.1 Olea europaea HOM05D000400 ORTHO05D001199 2.6e-06 55.1 67 38.8
PSO675G2447 Papaver somniferum HOM05D000400 ORTHO05D001199 2.6e-06 55.1 67 38.8
QL08p039535 Quercus lobata HOM05D000400 ORTHO05D001199 2.6e-06 55.1 70 37.1
vmacro12323 Vaccinium macrocarpon HOM05D000400 ORTHO05D001199 2.6e-06 55.1 61 39.3
arahy.Tifrunner.gnm1.ann1.4R2B5R Arachis hypogaea HOM05D000400 ORTHO05D001199 3.4e-06 54.7 70 31.4
arahy.Tifrunner.gnm1.ann1.DCBE83 Arachis hypogaea HOM05D000400 ORTHO05D001199 3.4e-06 54.7 70 31.4
DCAR_009751 Daucus carota HOM05D000400 ORTHO05D001199 3.4e-06 54.7 67 34.3
Glyma.13G295900 Glycine max HOM05D000400 ORTHO05D001199 3.4e-06 54.7 67 38.8
Nitab4.5_0002929g0030 Nicotiana tabacum HOM05D000400 ORTHO05D001199 3.4e-06 54.7 67 35.8
SEGI_37239 Sequoiadendron giganteum HOM05D000400 ORTHO05D001199 3.4e-06 54.7 66 40.9
Atru.chr6.2970 Acer truncatum HOM05D000400 ORTHO05D001199 4.4e-06 54.3 69 34.8
arahy.Tifrunner.gnm1.ann1.V12FMJ Arachis hypogaea HOM05D000400 ORTHO05D001199 4.4e-06 54.3 71 36.6
Haze_13189 Corylus avellana HOM05D000400 ORTHO05D001199 4.4e-06 54.3 70 37.1
Migut.M00282 Erythranthe guttata HOM05D000400 ORTHO05D001199 4.4e-06 54.3 67 37.3
Eucgr.H00010 Eucalyptus grandis HOM05D000400 ORTHO05D001199 4.4e-06 54.3 63 34.9
Glyma.19G046000 Glycine max HOM05D000400 ORTHO05D001199 4.4e-06 54.3 70 32.9
Medtr7g009960 Medicago truncatula HOM05D000400 ORTHO05D001199 4.4e-06 54.3 67 32.8
PSO423G0010 Papaver somniferum HOM05D000400 ORTHO05D001199 4.4e-06 54.3 66 39.4
Rhsim06G0154600 Rhododendron simsii HOM05D000400 ORTHO05D001199 4.4e-06 54.3 67 35.8
Aqoxy3G03304 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 5.8e-06 53.9 66 40.9
CSS0030585 Camellia sinensis var. sinensis HOM05D000400 ORTHO05D001199 5.8e-06 53.9 67 37.3
Glyma.13G046600 Glycine max HOM05D000400 ORTHO05D001199 5.8e-06 53.9 70 32.9
Lalb_Chr02g0158291 Lupinus albus HOM05D000400 ORTHO05D001199 5.8e-06 53.9 63 38.1
Psat3g195560 Pisum sativum HOM05D000400 ORTHO05D001199 5.8e-06 53.9 67 32.8
SalBow7G1412 Salvia bowleyana HOM05D000400 ORTHO05D001199 5.8e-06 53.9 67 35.8
TPR.G37763 Trifolium pratense HOM05D000400 ORTHO05D001199 5.8e-06 53.9 69 36.2
Aqoxy1G01879 Aquilegia oxysepala HOM05D000400 ORTHO05D001199 7.6e-06 53.5 69 36.2
arahy.Tifrunner.gnm1.ann1.9WJW1L Arachis hypogaea HOM05D000400 ORTHO05D001199 7.6e-06 53.5 71 38.0
arahy.Tifrunner.gnm1.ann1.PV9TPZ Arachis hypogaea HOM05D000400 ORTHO05D001199 7.6e-06 53.5 67 32.8
DCAR_013325 Daucus carota HOM05D000400 ORTHO05D001199 7.6e-06 53.5 60 38.3
Nn5g27422 Nelumbo nucifera HOM05D000400 ORTHO05D001199 7.6e-06 53.5 65 36.9
SEGI_30598 Sequoiadendron giganteum HOM05D000400 ORTHO05D000575 7.6e-06 53.5 66 40.9
Solyc07g053890.3 Solanum lycopersicum HOM05D000400 ORTHO05D001199 7.6e-06 53.5 67 34.3
Sopen07g027870 Solanum pennellii HOM05D000400 ORTHO05D001199 7.6e-06 53.5 67 34.3
PGSC0003DMG400032821 Solanum tuberosum HOM05D000400 ORTHO05D001199 7.6e-06 53.5 67 34.3
CAN.G578.17 Capsicum annuum HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 34.3
AUR62007712 Chenopodium quinoa HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 34.3
AUR62013431 Chenopodium quinoa HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 34.3
Ca_11110_v3 Cicer arietinum L. HOM05D000400 ORTHO05D001199 9.9e-06 53.1 70 34.3
Haze_13188 Corylus avellana HOM05D000400 ORTHO05D001199 9.9e-06 53.1 70 35.7
Gorai.012G127500 Gossypium raimondii HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 37.3
Lalb_Chr22g0356601 Lupinus albus HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 37.3
Peaxi162Scf00008g00817 Petunia axillaris HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 37.3
Peaxi162Scf00040g03012 Petunia axillaris HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 34.3
Phvul.005G102500 Phaseolus vulgaris HOM05D000400 ORTHO05D001199 9.9e-06 53.1 66 36.4
Phvul.005G102600 Phaseolus vulgaris HOM05D000400 ORTHO05D001199 9.9e-06 53.1 65 36.9
Psat0s1104g0040 Pisum sativum HOM05D000400 ORTHO05D001199 9.9e-06 53.1 67 35.8
Psat3g107680 Pisum sativum HOM05D000400 ORTHO05D001199 9.9e-06 53.1 69 31.9
Prupe.3G140400 Prunus persica HOM05D000400 ORTHO05D001199 9.9e-06 53.1 70 34.3
Prupe.3G140700 Prunus persica HOM05D000400 ORTHO05D001199 9.9e-06 53.1 68 36.8
Prupe.3G141100 Prunus persica HOM05D000400 ORTHO05D001199 9.9e-06 53.1 68 36.8


User provided reference genes

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