Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22492 Sequoiadendron giganteum HOM05D001079 ORTHO05D386179 6.2e-112 407.5 214 100.0
SEGI_33152 Sequoiadendron giganteum HOM05D001079 ORTHO05D000945 1.2e-33 147.5 127 65.4
SEGI_01421 Sequoiadendron giganteum HOM05D001079 ORTHO05D000945 6.2e-19 98.6 87 56.3
SEGI_11823 Sequoiadendron giganteum HOM05D001079 ORTHO05D387095 2.6e-17 93.2 89 60.7
ATR0767G128 Amborella trichopoda HOM05D001079 ORTHO05D000945 2.8e-11 73.2 126 36.5
TAR628G0382 Trochodendron aralioides HOM05D001079 ORTHO05D000945 1.2e-09 67.8 124 37.9
CAN.G416.49 Capsicum annuum HOM05D001079 ORTHO05D000945 2.6e-09 66.6 80 45.0
SEGI_36203 Sequoiadendron giganteum HOM05D000082 ORTHO05D000038 2.6e-09 66.6 126 39.7
PSO541G2999 Papaver somniferum HOM05D001079 ORTHO05D000945 3.4e-09 66.2 126 36.5
PSO675G4704 Papaver somniferum HOM05D001079 ORTHO05D000945 4.4e-09 65.9 126 35.7
Migut.N02814 Erythranthe guttata HOM05D001079 ORTHO05D000945 5.8e-09 65.5 83 42.2
Lj1g0017519 Lotus japonicus HOM05D001079 ORTHO05D000945 5.8e-09 65.5 122 35.2
PGSC0003DMG400004957 Solanum tuberosum HOM05D001079 ORTHO05D000945 5.8e-09 65.5 82 43.9
Atru.chr13.909 Acer truncatum HOM05D001079 ORTHO05D000945 7.6e-09 65.1 86 45.3
Glyma.06G089600 Glycine max HOM05D001079 ORTHO05D000945 7.6e-09 65.1 128 35.2
Solyc04g077140.3 Solanum lycopersicum HOM05D001079 ORTHO05D000945 7.6e-09 65.1 82 43.9
Sed0022698 Sechium edule HOM05D001079 ORTHO05D000945 9.9e-09 64.7 82 43.9
ClCG11G014960 Citrullus lanatus HOM05D001079 ORTHO05D000945 1.7e-08 63.9 124 35.5
CsaV3_3G048370 Cucumis sativus L. HOM05D001079 ORTHO05D000945 1.7e-08 63.9 128 35.2
Lalb_Chr08g0242831 Lupinus albus HOM05D001079 ORTHO05D000945 1.7e-08 63.9 86 39.5
TAR261G0001 Trochodendron aralioides HOM05D001079 ORTHO05D000945 1.7e-08 63.9 128 35.9
TAR285G0002 Trochodendron aralioides HOM05D001079 ORTHO05D000945 1.7e-08 63.9 128 35.9
MBI16_g24168_MAGBIO Magnolia biondii HOM05D001079 ORTHO05D000945 2.2e-08 63.5 124 36.3
Nitab4.5_0001614g0060 Nicotiana tabacum HOM05D001079 ORTHO05D000945 2.2e-08 63.5 82 43.9
Phvul.009G113400 Phaseolus vulgaris HOM05D001079 ORTHO05D000945 2.2e-08 63.5 128 35.2
Sopen00g009400 Solanum pennellii HOM05D001079 ORTHO05D000945 2.9e-08 63.2 82 43.9
Aqoxy6G01529 Aquilegia oxysepala HOM05D001079 ORTHO05D000945 3.8e-08 62.8 131 32.8
Nitab4.5_0002415g0020 Nicotiana tabacum HOM05D001079 ORTHO05D000945 3.8e-08 62.8 82 42.7
Actinidia19276 Actinidia chinensis HOM05D001079 ORTHO05D000945 4.9e-08 62.4 81 44.4
Glyma.04G087800 Glycine max HOM05D001079 ORTHO05D000945 4.9e-08 62.4 86 39.5
TWI12G0511 Tripterygium wilfordii HOM05D001079 ORTHO05D000945 4.9e-08 62.4 86 39.5
TWI36G0501 Tripterygium wilfordii HOM05D001079 ORTHO05D000945 4.9e-08 62.4 130 31.5
VMungo1309G2056 Vigna mungo HOM05D001079 ORTHO05D000945 6.4e-08 62.0 128 32.8
MELO3C003482.2 Cucumis melo HOM05D001079 ORTHO05D000945 8.4e-08 61.6 128 35.2
Cfa020716 Carpinus fangiana HOM05D001079 ORTHO05D000945 1.1e-07 61.2 128 32.8
TWI56G0479 Tripterygium wilfordii HOM05D001079 ORTHO05D000945 1.1e-07 61.2 128 33.6
COL.COLO4_35365 Corchorus olitorius HOM05D001079 ORTHO05D000945 1.4e-07 60.8 124 34.7
Haze_19025 Corylus avellana HOM05D001079 ORTHO05D000945 1.4e-07 60.8 128 31.2
Gohir.A05G213800 Gossypium hirsutum HOM05D001079 ORTHO05D000945 1.4e-07 60.8 128 34.4
SMO200G0274 Selaginella moellendorffii HOM05D001079 ORTHO05D000945 1.4e-07 60.8 80 38.8
GSVIVG01009267001 Vitis vinifera HOM05D001079 ORTHO05D000945 1.4e-07 60.8 124 33.9
CiPaw.15G153900 Carya illinoinensis HOM05D001079 ORTHO05D000945 2.4e-07 60.1 124 34.7
CDE07G1522 Ceratophyllum demersum HOM05D001079 ORTHO05D000945 2.4e-07 60.1 130 33.1
Manes.18G052400 Manihot esculenta HOM05D001079 ORTHO05D000945 2.4e-07 60.1 125 33.6
Medtr3g110630 Medicago truncatula HOM05D001079 ORTHO05D000945 2.4e-07 60.1 128 33.6
Oeu059132.1 Olea europaea HOM05D001079 ORTHO05D000945 2.4e-07 60.1 121 34.7
Gorai.009G224000 Gossypium raimondii HOM05D001079 ORTHO05D000945 3.2e-07 59.7 128 35.2
Actinidia10246 Actinidia chinensis HOM05D001079 ORTHO05D000945 4.2e-07 59.3 81 43.2
Duzib093G1413 Durio zibethinus HOM05D001079 ORTHO05D000945 4.2e-07 59.3 124 33.9
Dinv44913 Davidia involucrata HOM05D001079 ORTHO05D000945 5.4e-07 58.9 124 33.9
PGR031G2138 Punica granatum HOM05D001079 ORTHO05D000945 5.4e-07 58.9 130 33.8
Thecc.08G081000 Theobroma cacao HOM05D001079 ORTHO05D000945 7.1e-07 58.5 124 33.9
Ah.11g039250 Amaranthus hybridus HOM05D001079 ORTHO05D000945 9.3e-07 58.2 124 33.1
AagrBONN_evm.TU.Sc2ySwM_228.4597 Anthoceros agrestis HOM05D001079 ORTHO05D000945 9.3e-07 58.2 116 33.6
Gohir.D05G217200 Gossypium hirsutum HOM05D001079 ORTHO05D000945 9.3e-07 58.2 128 35.2
Hma1.2p1_1068F.1_g254000 Hydrangea macrophylla HOM05D001079 ORTHO05D000945 9.3e-07 58.2 124 33.1
Psat5g019960 Pisum sativum HOM05D001079 ORTHO05D000945 9.3e-07 58.2 86 39.5
MSTRG.24400 Avicennia marina HOM05D001079 ORTHO05D000945 1.2e-06 57.8 75 38.7
Lj4C748T4 Lonicera japonica HOM05D001079 ORTHO05D000945 1.2e-06 57.8 124 34.7
QL12p040666 Quercus lobata HOM05D001079 ORTHO05D000945 1.2e-06 57.8 123 34.1
arahy.Tifrunner.gnm1.ann1.Z5N3XR Arachis hypogaea HOM05D001079 ORTHO05D000945 1.6e-06 57.4 129 34.9
CSS0045305 Camellia sinensis var. sinensis HOM05D001079 ORTHO05D000945 1.6e-06 57.4 82 40.2
vmacro21389 Vaccinium macrocarpon HOM05D001079 ORTHO05D000945 1.6e-06 57.4 84 39.3
vmacro21394 Vaccinium macrocarpon HOM05D001079 ORTHO05D000945 1.6e-06 57.4 84 39.3
Cpa.g.sc160.13 Carica papaya HOM05D001079 ORTHO05D000945 2.7e-06 56.6 121 33.9
Ca_15561_v3 Cicer arietinum L. HOM05D001079 ORTHO05D000945 2.7e-06 56.6 128 32.0
Duzib116G0742 Durio zibethinus HOM05D001079 ORTHO05D000945 2.7e-06 56.6 124 32.3
FAN08G2785 Fragaria x ananassa HOM05D001079 ORTHO05D000945 2.7e-06 56.6 130 33.1
FAN18G0419 Fragaria x ananassa HOM05D001079 ORTHO05D000945 2.7e-06 56.6 130 33.1
AL1G20720 Arabidopsis lyrata HOM05D001079 ORTHO05D000945 3.5e-06 56.2 84 35.7
Oeu007811.1 Olea europaea HOM05D001079 ORTHO05D000945 3.5e-06 56.2 83 41.0
RcHm_v2.0_Chr7g0232151 Rosa chinensis HOM05D001079 ORTHO05D000945 4.6e-06 55.8 129 34.1
SMO364G0118 Selaginella moellendorffii HOM05D001079 ORTHO05D000945 4.6e-06 55.8 75 41.3
CDE06G1530 Ceratophyllum demersum HOM05D001079 ORTHO05D000945 6.0e-06 55.5 128 31.2
Peaxi162Scf00628g00514 Petunia axillaris HOM05D001079 ORTHO05D000945 6.0e-06 55.5 81 43.2
CDE04G2024 Ceratophyllum demersum HOM05D001079 ORTHO05D000945 7.8e-06 55.1 124 30.6
FvH4_5g33420 Fragaria vesca HOM05D001079 ORTHO05D000945 7.8e-06 55.1 130 33.1
Gohir.A06G027701 Gossypium hirsutum HOM05D001079 ORTHO05D000945 7.8e-06 55.1 124 31.5


User provided reference genes

Program Settings