Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22474 Sequoiadendron giganteum HOM05D003273 ORTHO05D048589 6.3e-48 193.7 95 100.0
ECA233G4911 Erigeron canadensis HOM05D003273 ORTHO05D004023 1.8e-26 122.5 73 76.7
Mapoly0001s0278 Marchantia polymorpha HOM05D003273 ORTHO05D004023 2.3e-26 122.1 73 74.0
FAN08G0255 Fragaria x ananassa HOM05D003273 ORTHO05D004023 3.0e-26 121.7 77 72.7
FAN13G0487 Fragaria x ananassa HOM05D003273 ORTHO05D004023 4.0e-26 121.3 77 72.7
FvH4_5g11020 Fragaria vesca HOM05D003273 ORTHO05D004023 5.2e-26 120.9 89 65.2
FAN18G0547 Fragaria x ananassa HOM05D003273 ORTHO05D004023 5.2e-26 120.9 89 65.2
Cfa011934 Carpinus fangiana HOM05D003273 ORTHO05D004023 8.8e-26 120.2 75 70.7
Os02g0686600 Oryza sativa ssp. japonica HOM05D003273 ORTHO05D004023 1.2e-25 119.8 86 66.3
RcHm_v2.0_Chr7g0186791 Rosa chinensis HOM05D003273 ORTHO05D004023 1.2e-25 119.8 77 71.4
Sabra15G0006000 Salix brachista HOM05D003273 ORTHO05D004023 1.2e-25 119.8 74 71.6
Zm00001eb187580 Zea mays HOM05D003273 ORTHO05D004023 1.2e-25 119.8 86 66.3
CBR_g22390 Chara braunii HOM05D003273 ORTHO05D004023 2.0e-25 119.0 77 68.8
Haze_09156 Corylus avellana HOM05D003273 ORTHO05D004023 2.0e-25 119.0 74 71.6
MELO3C005779.2 Cucumis melo HOM05D003273 ORTHO05D004023 2.0e-25 119.0 87 62.1
Manes.02G003700 Manihot esculenta HOM05D003273 ORTHO05D004023 2.0e-25 119.0 87 63.2
unitig_27.g25045 Utricularia gibba HOM05D003273 ORTHO05D004023 2.0e-25 119.0 75 70.7
MBI12_g30968_MAGBIO Magnolia biondii HOM05D003273 ORTHO05D004023 2.6e-25 118.6 75 72.0
GSVIVG01019639001 Vitis vinifera HOM05D003273 ORTHO05D004023 2.6e-25 118.6 75 70.7
CANSAT21G0905 Cannabis sativa HOM05D003273 ORTHO05D004023 3.3e-25 118.2 75 70.7
Duzib205G2016 Durio zibethinus HOM05D003273 ORTHO05D004023 3.3e-25 118.2 75 69.3
Hma1.2p1_0440F.1_g153770 Hydrangea macrophylla HOM05D003273 ORTHO05D004023 3.3e-25 118.2 75 68.0
Sed0005002 Sechium edule HOM05D003273 ORTHO05D004023 3.3e-25 118.2 87 62.1
Thecc.03G222300 Theobroma cacao HOM05D003273 ORTHO05D004023 3.3e-25 118.2 75 69.3
arahy.Tifrunner.gnm1.ann1.4I2CMT Arachis hypogaea HOM05D003273 ORTHO05D004023 4.4e-25 117.9 75 68.0
arahy.Tifrunner.gnm1.ann1.XN2XCV Arachis hypogaea HOM05D003273 ORTHO05D004023 4.4e-25 117.9 75 68.0
Haze_09162 Corylus avellana HOM05D003273 ORTHO05D004023 4.4e-25 117.9 75 68.0
Haze_16435 Corylus avellana HOM05D003273 ORTHO05D004023 4.4e-25 117.9 74 70.3
CsaV3_5G001740 Cucumis sativus L. HOM05D003273 ORTHO05D004023 4.4e-25 117.9 87 60.9
Manes.01G038033 Manihot esculenta HOM05D003273 ORTHO05D004023 4.4e-25 117.9 87 62.1
CiPaw.12G078300 Carya illinoinensis HOM05D003273 ORTHO05D004023 5.7e-25 117.5 87 60.9
Eucgr.D01687 Eucalyptus grandis HOM05D003273 ORTHO05D004023 5.7e-25 117.5 75 70.7
HanXRQChr06g0175641 Helianthus annuus HOM05D003273 ORTHO05D004023 5.7e-25 117.5 73 71.2
Hma1.2p1_0212F.1_g090240 Hydrangea macrophylla HOM05D003273 ORTHO05D004023 5.7e-25 117.5 75 68.0
Lj8A201T85 Lonicera japonica HOM05D003273 ORTHO05D004023 5.7e-25 117.5 75 70.7
Potri.015G007900 Populus trichocarpa HOM05D003273 ORTHO05D004023 5.7e-25 117.5 74 70.3
Prupe.5G128600 Prunus persica HOM05D003273 ORTHO05D004023 5.7e-25 117.5 75 70.7
QL02p029218 Quercus lobata HOM05D003273 ORTHO05D004023 5.7e-25 117.5 75 69.3
CSS0027977 Camellia sinensis var. sinensis HOM05D003273 ORTHO05D004023 7.5e-25 117.1 75 69.3
Atru.chr9.1901 Acer truncatum HOM05D003273 ORTHO05D004023 9.7e-25 116.7 75 69.3
Cc08_g16670 Coffea canephora HOM05D003273 ORTHO05D004023 9.7e-25 116.7 75 68.0
Nn3g18892 Nelumbo nucifera HOM05D003273 ORTHO05D004023 9.7e-25 116.7 74 68.9
SalBow4G0738 Salvia bowleyana HOM05D003273 ORTHO05D004023 9.7e-25 116.7 74 70.3
EL10Ac3g05238 Beta vulgaris HOM05D003273 ORTHO05D004023 1.3e-24 116.3 74 70.3
Ciclev10020636m.g Citrus clementina HOM05D003273 ORTHO05D004023 1.3e-24 116.3 75 68.0
Duzib084G1122 Durio zibethinus HOM05D003273 ORTHO05D004023 1.3e-24 116.3 74 70.3
Thecc.03G204800 Theobroma cacao HOM05D003273 ORTHO05D004023 1.3e-24 116.3 87 62.1
AUR62006057 Chenopodium quinoa HOM05D003273 ORTHO05D004023 1.7e-24 115.9 74 68.9
ClCG01G001580 Citrullus lanatus HOM05D003273 ORTHO05D004023 1.7e-24 115.9 87 59.8
MBI02_g35793_MAGBIO Magnolia biondii HOM05D003273 ORTHO05D048589 1.7e-24 115.9 74 70.3
Solyc11g020870.3 Solanum lycopersicum HOM05D003273 ORTHO05D004023 1.7e-24 115.9 75 68.0
Duzib084G1283 Durio zibethinus HOM05D003273 ORTHO05D004023 2.2e-24 115.5 75 68.0
Migut.A01094 Erythranthe guttata HOM05D003273 ORTHO05D004023 2.2e-24 115.5 75 69.3
PSO135G0859 Papaver somniferum HOM05D003273 ORTHO05D004023 2.2e-24 115.5 87 60.9
PSO384G4673 Papaver somniferum HOM05D003273 ORTHO05D004023 2.2e-24 115.5 87 60.9
Sopen11g011040 Solanum pennellii HOM05D003273 ORTHO05D004023 2.2e-24 115.5 75 68.0
PGSC0003DMG400009282 Solanum tuberosum HOM05D003273 ORTHO05D004023 2.2e-24 115.5 75 68.0
TWI60G0246 Tripterygium wilfordii HOM05D003273 ORTHO05D004023 2.2e-24 115.5 75 68.0
MSTRG.12197 Avicennia marina HOM05D003273 ORTHO05D004023 2.8e-24 115.2 75 66.7
CAN.G544.1 Capsicum annuum HOM05D003273 ORTHO05D004023 2.8e-24 115.2 75 69.3
Ca_20068_v3 Cicer arietinum L. HOM05D003273 ORTHO05D004023 2.8e-24 115.2 75 68.0
Nitab4.5_0007932g0010 Nicotiana tabacum HOM05D003273 ORTHO05D004023 2.8e-24 115.2 75 66.7
TWI39G0427 Tripterygium wilfordii HOM05D003273 ORTHO05D004023 2.8e-24 115.2 74 70.3
Lsat_1_v5_gn_8_5581 Lactuca sativa HOM05D003273 ORTHO05D004023 3.7e-24 114.8 73 71.2
Nitab4.5_0000167g0260 Nicotiana tabacum HOM05D003273 ORTHO05D004023 3.7e-24 114.8 75 66.7
QL09p007601 Quercus lobata HOM05D003273 ORTHO05D004023 3.7e-24 114.8 86 61.6
Sed0020813 Sechium edule HOM05D003273 ORTHO05D004023 3.7e-24 114.8 87 60.9
VMungo0331G1540 Vigna mungo HOM05D003273 ORTHO05D004023 3.7e-24 114.8 75 68.0
Actinidia27289 Actinidia chinensis HOM05D003273 ORTHO05D004023 4.8e-24 114.4 75 65.3
arahy.Tifrunner.gnm1.ann1.9WJ8JE Arachis hypogaea HOM05D003273 ORTHO05D004023 4.8e-24 114.4 73 68.5
Peaxi162Scf00391g00526 Petunia axillaris HOM05D003273 ORTHO05D004023 4.8e-24 114.4 87 60.9
Phvul.010G015700 Phaseolus vulgaris HOM05D003273 ORTHO05D004023 4.8e-24 114.4 77 67.5
Rhsim07G0078300 Rhododendron simsii HOM05D003273 ORTHO05D004023 4.8e-24 114.4 75 65.3
SMO348G0098 Selaginella moellendorffii HOM05D003273 ORTHO05D004023 4.8e-24 114.4 75 68.0
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 6.3e-24 114.0 93 59.1
COL.COLO4_10786 Corchorus olitorius HOM05D003273 ORTHO05D004023 6.3e-24 114.0 75 66.7
COL.COLO4_16825 Corchorus olitorius HOM05D003273 ORTHO05D004023 6.3e-24 114.0 86 62.8
Gohir.D09G183600 Gossypium hirsutum HOM05D003273 ORTHO05D004023 6.3e-24 114.0 75 65.3
Gorai.006G206000 Gossypium raimondii HOM05D003273 ORTHO05D004023 6.3e-24 114.0 75 65.3
Glyma.03G068700 Glycine max HOM05D003273 ORTHO05D004023 8.2e-24 113.6 85 62.4
Lalb_Chr12g0209471 Lupinus albus HOM05D003273 ORTHO05D004023 8.2e-24 113.6 75 66.7
ATR0620G033 Amborella trichopoda HOM05D003273 ORTHO05D004023 1.1e-23 113.2 75 65.3
Aqoxy1G01329 Aquilegia oxysepala HOM05D003273 ORTHO05D004023 1.1e-23 113.2 87 58.6
Glyma.01G100900 Glycine max HOM05D003273 ORTHO05D004023 1.1e-23 113.2 87 60.9
Actinidia22200 Actinidia chinensis HOM05D003273 ORTHO05D004023 1.4e-23 112.8 75 62.7
arahy.Tifrunner.gnm1.ann1.W6K2BP Arachis hypogaea HOM05D003273 ORTHO05D004023 1.4e-23 112.8 73 68.5
CDE12G0336 Ceratophyllum demersum HOM05D003273 ORTHO05D004023 1.4e-23 112.8 74 68.9
Dinv12010 Davidia involucrata HOM05D003273 ORTHO05D004023 1.4e-23 112.8 75 66.7
MD06G1117500 Malus domestica HOM05D003273 ORTHO05D004023 1.4e-23 112.8 77 68.8
Psat7g239560 Pisum sativum HOM05D003273 ORTHO05D004023 1.4e-23 112.8 75 65.3
PGR031G1116 Punica granatum HOM05D003273 ORTHO05D004023 1.4e-23 112.8 75 65.3
THA.LOC104809309 Tarenaya hassleriana HOM05D003273 ORTHO05D004023 1.4e-23 112.8 75 68.0
CSS0038608 Camellia sinensis var. sinensis HOM05D003273 ORTHO05D004023 1.8e-23 112.5 73 68.5
Pp3c17_23840 Physcomitrium patens HOM05D003273 ORTHO05D004023 1.8e-23 112.5 76 64.5
PGR142G1037 Punica granatum HOM05D003273 ORTHO05D004023 1.8e-23 112.5 85 63.5
Sp7g00160 Schrenkiella parvula HOM05D003273 ORTHO05D004023 1.8e-23 112.5 75 66.7
Hund21023 Selenicereus undatus HOM05D003273 ORTHO05D004023 1.8e-23 112.5 74 67.6
Phvul.009G048500 Phaseolus vulgaris HOM05D003273 ORTHO05D004023 2.4e-23 112.1 73 67.1
Pp3c14_23100 Physcomitrium patens HOM05D003273 ORTHO05D004023 2.4e-23 112.1 76 67.1
TWI32G0870 Tripterygium wilfordii HOM05D003273 ORTHO05D004023 2.4e-23 112.1 75 66.7
Ah.07g205170 Amaranthus hybridus HOM05D003273 ORTHO05D004023 3.1e-23 111.7 74 68.9
AT5G41970 Arabidopsis thaliana HOM05D003273 ORTHO05D004023 3.1e-23 111.7 75 65.3
Lj3g0027552 Lotus japonicus HOM05D003273 ORTHO05D004023 3.1e-23 111.7 75 64.0
Peaxi162Scf00075g00020 Petunia axillaris HOM05D003273 ORTHO05D004023 3.1e-23 111.7 73 68.5
Hund15921 Selenicereus undatus HOM05D003273 ORTHO05D004023 3.1e-23 111.7 74 66.2
Sc01g0010600 Simmondsia chinensis HOM05D003273 ORTHO05D004023 3.1e-23 111.7 86 62.8
vmacro10143 Vaccinium macrocarpon HOM05D003273 ORTHO05D004023 3.1e-23 111.7 73 68.5
AL7G47250 Arabidopsis lyrata HOM05D003273 ORTHO05D004023 4.1e-23 111.3 75 66.7
Cpa.g.sc175.16 Carica papaya HOM05D003273 ORTHO05D004023 4.1e-23 111.3 75 62.7
Cpa.g.sc3.124 Carica papaya HOM05D003273 ORTHO05D004023 4.1e-23 111.3 86 60.5
Gohir.A12G239400 Gossypium hirsutum HOM05D003273 ORTHO05D004023 4.1e-23 111.3 75 65.3
Carub.0007s3341 Capsella rubella HOM05D003273 ORTHO05D004023 5.3e-23 110.9 75 65.3
Lsat_1_v5_gn_3_13701 Lactuca sativa HOM05D003273 ORTHO05D004023 5.3e-23 110.9 85 61.2
SGA_v2.0_scaffold104G30267 Striga asiatica HOM05D003273 ORTHO05D004023 5.3e-23 110.9 75 66.7
vmacro13853 Vaccinium macrocarpon HOM05D003273 ORTHO05D004023 5.3e-23 110.9 74 66.2
Ca_16738_v3 Cicer arietinum L. HOM05D003273 ORTHO05D004023 7.0e-23 110.5 79 62.0
DCAR_006537 Daucus carota HOM05D003273 ORTHO05D004023 7.0e-23 110.5 87 57.5
HanXRQChr06g0166851 Helianthus annuus HOM05D003273 ORTHO05D004023 7.0e-23 110.5 87 60.9
Lj1g0003180 Lotus japonicus HOM05D003273 ORTHO05D004023 7.0e-23 110.5 73 65.8
Aa31LG9G220 Aethionema arabicum HOM05D003273 ORTHO05D004023 9.1e-23 110.2 75 65.3
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 9.1e-23 110.2 75 65.3
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 9.1e-23 110.2 93 57.0
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 9.1e-23 110.2 75 65.3
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 9.1e-23 110.2 93 57.0
Gohir.D12G240600 Gossypium hirsutum HOM05D003273 ORTHO05D004023 9.1e-23 110.2 74 64.9
Gorai.008G257700 Gossypium raimondii HOM05D003273 ORTHO05D004023 9.1e-23 110.2 74 64.9
Ah.10g036600 Amaranthus hybridus HOM05D003273 ORTHO05D004023 1.2e-22 109.8 74 67.6
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 1.2e-22 109.8 93 57.0
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.2e-22 109.8 93 57.0
CARHR212590 Cardamine hirsuta HOM05D003273 ORTHO05D004023 1.2e-22 109.8 75 65.3
Haze_14078 Corylus avellana HOM05D003273 ORTHO05D004023 1.2e-22 109.8 66 74.2
VMungo1309G0452 Vigna mungo HOM05D003273 ORTHO05D004023 1.2e-22 109.8 73 64.4
Actinidia18673 Actinidia chinensis HOM05D003194 ORTHO05D003790 1.6e-22 109.4 73 67.1
HanXRQChr17g0534771 Helianthus annuus HOM05D003273 ORTHO05D004023 1.6e-22 109.4 75 65.3
TAR629G1687 Trochodendron aralioides HOM05D003273 ORTHO05D004023 1.6e-22 109.4 75 65.3
MSTRG.13718 Avicennia marina HOM05D003273 ORTHO05D004023 2.0e-22 109.0 75 62.7
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.0e-22 109.0 93 57.0
Medtr3g092050 Medicago truncatula HOM05D003273 ORTHO05D004023 2.0e-22 109.0 74 63.5
Medtr4g021175 Medicago truncatula HOM05D003273 ORTHO05D004023 2.0e-22 109.0 75 62.7
BolC6t37217H Brassica oleracea HOM05D003273 ORTHO05D004023 2.7e-22 108.6 75 64.0
Cre02.g118900 Chlamydomonas reinhardtii HOM05D003273 ORTHO05D004023 2.7e-22 108.6 77 62.3
MD14G1124700 Malus domestica HOM05D003273 ORTHO05D004023 2.7e-22 108.6 74 66.2
Oeu022038.1 Olea europaea HOM05D003273 ORTHO05D004023 2.7e-22 108.6 75 61.3
EL10Ac2g04846 Beta vulgaris HOM05D003273 ORTHO05D004023 3.5e-22 108.2 74 66.2
Thhalv10027801m.g Eutrema salsugineum HOM05D003273 ORTHO05D004023 3.5e-22 108.2 75 64.0
Rhsim09G0207800 Rhododendron simsii HOM05D003273 ORTHO05D004023 3.5e-22 108.2 73 65.8
SalBow7G1537 Salvia bowleyana HOM05D003273 ORTHO05D004023 3.5e-22 108.2 75 64.0
TPR.G33629 Trifolium pratense HOM05D003273 ORTHO05D004023 3.5e-22 108.2 74 63.5
CANSAT21G0938 Cannabis sativa HOM05D003273 ORTHO05D004023 4.5e-22 107.8 73 65.8
Sabra03G0106000 Salix brachista HOM05D003273 ORTHO05D004023 4.5e-22 107.8 75 64.0
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 5.9e-22 107.5 75 64.0
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.9e-22 107.5 75 64.0
DCAR_010582 Daucus carota HOM05D003273 ORTHO05D004023 5.9e-22 107.5 87 58.6
Carub.0005s1556 Capsella rubella HOM05D003273 ORTHO05D004023 7.7e-22 107.1 73 65.8
AUR62022899 Chenopodium quinoa HOM05D003273 ORTHO05D004023 1.7e-21 105.9 75 64.0
TPR.G5574 Trifolium pratense HOM05D003273 ORTHO05D004023 2.2e-21 105.5 75 62.7
AL5G29070 Arabidopsis lyrata HOM05D003273 ORTHO05D004023 2.9e-21 105.1 73 64.4
AUR62012264 Chenopodium quinoa HOM05D003273 ORTHO05D004023 5.0e-21 104.4 75 62.7
Thhalv10010489m.g Eutrema salsugineum HOM05D003273 ORTHO05D004023 5.0e-21 104.4 73 63.0
MCO15G708 Micromonas commoda HOM05D003273 ORTHO05D004023 8.5e-21 103.6 79 54.4
SEGI_15163 Sequoiadendron giganteum HOM05D003273 ORTHO05D004023 8.5e-21 103.6 75 60.0
C03p65670 Brassica napus HOM05D003273 ORTHO05D004023 1.1e-20 103.2 73 60.3
CARHR158260 Cardamine hirsuta HOM05D003273 ORTHO05D004023 1.1e-20 103.2 73 61.6
BcaC01g02402 Brassica carinata HOM05D003273 ORTHO05D004023 1.5e-20 102.8 73 60.3
A06p28150 Brassica napus HOM05D003273 ORTHO05D004023 1.5e-20 102.8 73 60.3
BolC3t18820H Brassica oleracea HOM05D003273 ORTHO05D004023 1.5e-20 102.8 73 60.3
THA.LOC104814942 Tarenaya hassleriana HOM05D003273 ORTHO05D004023 1.5e-20 102.8 73 63.0
AT3G49320 Arabidopsis thaliana HOM05D003273 ORTHO05D004023 2.5e-20 102.1 73 63.0
Sp5g12750 Schrenkiella parvula HOM05D003273 ORTHO05D004023 2.5e-20 102.1 73 61.6
Aa31LG4G17880 Aethionema arabicum HOM05D003273 ORTHO05D004023 3.2e-20 101.7 73 58.9
BraA06t25759Z Brassica rapa HOM05D003273 ORTHO05D004023 3.2e-20 101.7 73 58.9
Potri.003G145900 Populus trichocarpa HOM05D003273 ORTHO05D004023 3.2e-20 101.7 75 61.3
MD07G1061300 Malus domestica HOM05D003273 ORTHO05D004023 7.2e-20 100.5 77 58.4
Cfa022393 Carpinus fangiana HOM05D003273 ORTHO05D004023 2.7e-19 98.6 68 60.3
Lalb_Chr23g0271731 Lupinus albus HOM05D003273 ORTHO05D004023 2.7e-19 98.6 67 64.2
CiPaw.11G113500 Carya illinoinensis HOM05D003273 ORTHO05D004023 4.7e-19 97.8 65 64.6
Psat0s2659g0080 Pisum sativum HOM05D003273 ORTHO05D037364 4.7e-19 97.8 105 47.6
Eucgr.D01691 Eucalyptus grandis HOM05D003273 ORTHO05D004023 8.0e-19 97.1 87 51.7
SGA_v2.0_scaffold36G14277 Striga asiatica HOM05D003273 ORTHO05D004023 1.2e-17 93.2 64 64.1
Peaxi162Scf00074g00351 Petunia axillaris HOM05D003273 ORTHO05D004023 2.0e-17 92.4 79 58.2
PRCOL_00000558 Prasinoderma coloniale HOM05D003273 ORTHO05D004023 5.7e-17 90.9 74 54.1
BcaB02g09584 Brassica carinata HOM05D003273 ORTHO05D004023 1.7e-16 89.4 63 58.7
Haze_27261 Corylus avellana HOM05D003273 ORTHO05D004023 1.4e-15 86.3 68 52.9
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 6.8e-10 67.4 51 60.8
TAR374G0902 Trochodendron aralioides HOM05D003273 ORTHO05D004023 6.3e-08 60.8 35 74.3
Psat3g075760 Pisum sativum HOM05D003273 ORTHO05D037364 5.4e-07 57.8 36 63.9


User provided reference genes

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