Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.4e-229 798.9 537 100.0
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 7.6e-50 202.6 193 52.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.1e-48 196.1 207 54.1
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.3e-48 195.7 198 54.0
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.5e-47 193.7 198 53.5
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.5e-47 193.7 199 52.8
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 6.0e-47 193.0 203 53.2
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 7.9e-47 192.6 208 51.4
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.0e-46 192.2 208 50.5
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.8e-46 191.4 215 50.7
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.3e-46 191.0 200 52.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 2.3e-46 191.0 199 52.3
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 3.0e-46 190.7 201 52.7
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 5.1e-46 189.9 215 49.8
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 8.7e-46 189.1 197 51.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 8.7e-46 189.1 199 48.2
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.1e-45 188.7 205 51.7
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.5e-45 188.3 206 51.0
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.9e-45 188.0 205 49.8
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 2.5e-45 187.6 203 48.3
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 3.3e-45 187.2 200 51.0
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 3.3e-45 187.2 198 52.0
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 4.3e-45 186.8 195 52.8
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 5.7e-45 186.4 199 47.2
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 7.4e-45 186.0 198 50.0
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 9.6e-45 185.7 205 49.8
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.1e-44 184.5 195 47.7
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.8e-44 184.1 198 51.0
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 3.7e-44 183.7 203 49.8
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 4.8e-44 183.3 198 49.0
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 4.8e-44 183.3 195 50.3
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.8e-44 183.3 195 50.3
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 6.3e-44 183.0 198 51.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 8.2e-44 182.6 205 48.8
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.1e-43 182.2 206 49.5
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.1e-43 182.2 224 45.5
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.4e-43 181.8 199 46.7
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.4e-43 181.8 199 46.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.4e-43 181.8 200 49.5
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 1.8e-43 181.4 213 48.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.8e-43 181.4 196 49.5
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 2.4e-43 181.0 201 50.2
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 4.1e-43 180.3 202 51.5
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.0e-43 179.1 195 52.3
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 9.0e-43 179.1 195 48.2
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.2e-42 178.7 211 49.8
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.2e-42 178.7 201 49.8
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.2e-42 178.7 203 47.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.2e-42 178.7 205 47.3
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.0e-42 177.9 206 49.5
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 2.0e-42 177.9 192 51.0
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 3.4e-42 177.2 217 48.4
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 3.4e-42 177.2 207 48.3
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 4.5e-42 176.8 198 48.5
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 5.9e-42 176.4 201 48.8
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.0e-41 175.6 233 46.4
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.3e-41 175.3 195 48.7
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.7e-41 174.9 194 49.0
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 1.7e-41 174.9 195 48.7
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 1.7e-41 174.9 206 47.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 2.2e-41 174.5 193 49.2
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.2e-41 174.5 204 47.5
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.2e-41 174.5 198 48.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.9e-41 174.1 199 50.8
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 3.8e-41 173.7 207 46.9
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 3.8e-41 173.7 201 48.3
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 5.0e-41 173.3 207 47.3
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 8.5e-41 172.6 206 44.7
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 8.5e-41 172.6 200 48.5
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.1e-40 172.2 206 46.6
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.9e-40 171.4 195 49.2
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 1.9e-40 171.4 208 47.6
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 3.2e-40 170.6 199 48.7
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 4.2e-40 170.2 183 51.4
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 4.2e-40 170.2 199 48.2
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 4.2e-40 170.2 202 48.0
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 7.2e-40 169.5 182 52.7
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 9.3e-40 169.1 201 48.8
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 9.3e-40 169.1 203 46.8
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 2.1e-39 167.9 205 46.3
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.1e-39 167.9 196 46.9
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.1e-39 167.9 201 45.8
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.1e-39 167.9 208 45.2
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 4.6e-39 166.8 211 47.9
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.0e-38 165.6 200 48.5
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.0e-38 165.6 228 42.5
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-38 165.2 197 46.2
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.5e-37 161.0 199 45.2
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 3.3e-37 160.6 190 45.8
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 4.3e-37 160.2 180 50.0
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 1.3e-36 158.7 201 44.8
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 2.2e-36 157.9 192 45.8
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.7e-36 157.1 198 45.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.1e-35 155.6 202 43.1
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.8e-35 154.8 195 43.1
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.8e-35 154.8 178 47.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.3e-35 153.3 194 49.0
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 5.9e-34 149.8 221 42.1
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.7e-34 149.4 195 42.6
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 7.7e-34 149.4 178 48.3
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.9e-33 147.5 188 48.9
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.4e-32 145.2 211 37.9
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.9e-32 144.8 183 45.4
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 1.2e-31 142.1 190 43.2
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.6e-31 141.7 230 41.3
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 4.6e-31 140.2 200 43.0
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.8e-30 138.3 205 40.5
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 6.7e-30 136.3 159 49.7
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.1e-29 135.6 167 46.7
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.5e-26 125.2 194 40.2
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.3e-17 95.5 93 55.9
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 6.1e-15 86.7 126 46.0
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 5.3e-11 73.6 49 71.4
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 5.5e-08 63.5 56 57.1
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 4.0e-06 57.4 150 30.7
SEGI_23578 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 4.0e-06 57.4 97 38.1


User provided reference genes

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