Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 6.5e-55 217.2 116 100.0
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.0e-12 77.0 93 46.2
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 4.0e-12 75.1 98 42.9
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.2e-11 73.6 87 47.1
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 1.2e-11 73.6 87 47.1
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 1.2e-11 73.6 89 44.9
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 1.5e-11 73.2 53 60.4
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 4.4e-11 71.6 52 57.7
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 5.7e-11 71.2 53 58.5
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 5.7e-11 71.2 90 41.1
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 5.7e-11 71.2 52 57.7
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 5.7e-11 71.2 53 54.7
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 5.7e-11 71.2 53 58.5
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 7.5e-11 70.9 52 59.6
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 9.8e-11 70.5 53 58.5
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 9.8e-11 70.5 53 60.4
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 2.2e-10 69.3 53 56.6
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 2.2e-10 69.3 53 54.7
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 2.8e-10 68.9 98 39.8
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.7e-10 68.6 53 52.8
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.7e-10 68.6 54 53.7
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 3.7e-10 68.6 54 51.9
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 4.8e-10 68.2 53 58.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 4.8e-10 68.2 54 55.6
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 6.3e-10 67.8 53 52.8
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 6.3e-10 67.8 89 39.3
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 6.3e-10 67.8 53 56.6
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 8.3e-10 67.4 53 54.7
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 8.3e-10 67.4 52 51.9
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 8.3e-10 67.4 53 50.9
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 8.3e-10 67.4 52 53.8
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 8.3e-10 67.4 54 55.6
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 8.3e-10 67.4 53 50.9
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.1e-09 67.0 53 52.8
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.1e-09 67.0 89 39.3
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.1e-09 67.0 89 39.3
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.4e-09 66.6 53 54.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 1.4e-09 66.6 54 53.7
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.4e-09 66.6 87 40.2
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.4e-09 66.6 54 50.0
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.8e-09 66.2 53 54.7
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 1.8e-09 66.2 53 52.8
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.8e-09 66.2 53 52.8
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 2.4e-09 65.9 53 50.9
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 2.4e-09 65.9 53 52.8
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.4e-09 65.9 53 50.9
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 3.1e-09 65.5 53 54.7
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 4.1e-09 65.1 52 51.9
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 5.4e-09 64.7 95 40.0
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 5.4e-09 64.7 54 50.0
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 5.4e-09 64.7 52 51.9
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 7.0e-09 64.3 104 36.5
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 7.0e-09 64.3 53 52.8
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 7.0e-09 64.3 53 52.8
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 7.0e-09 64.3 53 50.9
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 7.0e-09 64.3 74 43.2
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 9.1e-09 63.9 54 50.0
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 9.1e-09 63.9 91 39.6
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 9.1e-09 63.9 53 50.9
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 9.1e-09 63.9 53 49.1
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 9.1e-09 63.9 53 52.8
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 50.9
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.2e-08 63.5 91 38.5
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 50.9
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 50.9
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 50.9
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 50.9
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 50.9
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.2e-08 63.5 52 51.9
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.2e-08 63.5 53 49.1
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.2e-08 63.5 54 50.0
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.6e-08 63.2 53 50.9
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.0e-08 62.8 49 53.1
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.0e-08 62.8 49 53.1
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 2.7e-08 62.4 53 49.1
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 4.5e-08 61.6 53 49.1
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.5e-08 61.6 53 49.1
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 7.7e-08 60.8 90 37.8
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.0e-07 60.5 89 37.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.0e-07 60.5 53 50.9
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.3e-07 60.1 54 46.3
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.7e-07 59.7 52 50.0
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 2.3e-07 59.3 53 47.2
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.3e-07 59.3 53 47.2
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.3e-07 59.3 53 47.2
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.3e-07 59.3 53 47.2
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 2.9e-07 58.9 51 51.0
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 5.0e-07 58.2 48 52.1
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 8.6e-07 57.4 54 44.4
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 3.3e-06 55.5 48 50.0
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 9.5e-06 53.9 42 59.5
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 9.5e-06 53.9 47 44.7


User provided reference genes

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