Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 6.6e-69 263.8 128 100.0
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 7.9e-62 240.4 122 95.1
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 5.9e-25 117.9 107 51.4
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 7.4e-20 100.9 121 43.8
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 4.8e-19 98.2 114 45.6
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 4.8e-19 98.2 116 41.4
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 4.8e-19 98.2 117 43.6
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 4.8e-19 98.2 117 43.6
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 4.8e-19 98.2 121 43.0
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 4.8e-19 98.2 138 38.4
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 6.3e-19 97.8 114 44.7
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 6.3e-19 97.8 116 44.0
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 8.2e-19 97.4 122 40.2
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 8.2e-19 97.4 116 43.1
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 8.2e-19 97.4 118 42.4
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.1e-18 97.1 114 43.9
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 4.1e-18 95.1 117 42.7
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 5.3e-18 94.7 121 40.5
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 9.1e-18 94.0 113 40.7
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.2e-17 93.6 115 41.7
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 1.6e-17 93.2 122 38.5
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 2.0e-17 92.8 115 40.9
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 2.6e-17 92.4 112 45.5
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 3.5e-17 92.0 117 41.9
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 3.5e-17 92.0 117 41.0
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 4.5e-17 91.7 119 39.5
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 4.5e-17 91.7 106 45.3
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 4.5e-17 91.7 119 38.7
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 5.9e-17 91.3 116 39.7
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 7.7e-17 90.9 106 44.3
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 7.7e-17 90.9 106 44.3
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 7.7e-17 90.9 118 40.7
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 7.7e-17 90.9 120 42.5
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.0e-16 90.5 119 39.5
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 1.0e-16 90.5 118 39.0
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 1.0e-16 90.5 117 41.0
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 1.3e-16 90.1 136 39.0
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 1.3e-16 90.1 122 37.7
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 1.7e-16 89.7 137 37.2
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 1.7e-16 89.7 106 45.3
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.7e-16 89.7 120 39.2
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 2.2e-16 89.4 117 37.6
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 2.2e-16 89.4 117 37.6
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 2.9e-16 89.0 106 43.4
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 2.9e-16 89.0 106 43.4
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 2.9e-16 89.0 106 43.4
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 2.9e-16 89.0 106 43.4
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 2.9e-16 89.0 117 37.6
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 2.9e-16 89.0 120 36.7
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 2.9e-16 89.0 119 42.0
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 3.8e-16 88.6 116 39.7
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.5e-16 87.8 114 38.6
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 8.5e-16 87.4 126 36.5
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 8.5e-16 87.4 118 36.4
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 8.5e-16 87.4 118 36.4
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.1e-15 87.0 119 38.7
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 1.1e-15 87.0 119 39.5
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 1.1e-15 87.0 113 38.9
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.1e-15 87.0 123 39.0
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.9e-15 86.3 107 41.1
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.9e-15 86.3 108 42.6
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.9e-15 86.3 116 37.9
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.5e-15 85.9 126 35.7
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 2.5e-15 85.9 112 39.3
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 3.2e-15 85.5 110 40.9
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 3.2e-15 85.5 116 37.1
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 4.2e-15 85.1 119 38.7
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 4.2e-15 85.1 119 38.7
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 4.2e-15 85.1 121 36.4
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 4.2e-15 85.1 112 39.3
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 4.2e-15 85.1 119 38.7
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 4.2e-15 85.1 114 37.7
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 9.4e-15 84.0 106 42.5
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 9.4e-15 84.0 117 40.2
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 9.4e-15 84.0 119 36.1
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 9.4e-15 84.0 123 38.2
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.2e-14 83.6 116 36.2
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 1.6e-14 83.2 111 37.8
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 2.7e-14 82.4 113 37.2
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 2.7e-14 82.4 117 35.9
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 2.7e-14 82.4 119 35.3
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 4.7e-14 81.6 106 42.5
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 6.1e-14 81.3 106 41.5
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 8.0e-14 80.9 117 35.9
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 8.0e-14 80.9 120 36.7
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 1.0e-13 80.5 117 38.5
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 1.0e-13 80.5 124 34.7
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 1.4e-13 80.1 106 40.6
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.4e-13 80.1 117 35.9
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 1.8e-13 79.7 116 37.9
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 3.4e-12 75.5 106 37.7
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 2.2e-11 72.8 76 46.1
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 3.6e-06 55.5 52 50.0
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 3.6e-06 55.5 118 26.3


User provided reference genes

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