Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 0.0e+00 1103.2 568 100.0
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.7e-153 547.0 568 53.0
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.1e-151 540.0 572 52.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.0e-141 506.9 549 52.1
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 1.7e-124 450.7 558 46.6
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.9e-123 447.2 561 46.0
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 2.5e-112 410.2 492 48.0
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 4.3e-112 409.5 552 42.9
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 7.4e-112 408.7 554 44.0
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 7.7e-109 398.7 545 42.6
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 2.9e-108 396.7 518 44.8
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 8.5e-108 395.2 551 41.9
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 1.1e-107 394.8 568 41.4
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 5.5e-107 392.5 557 41.3
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 2.1e-106 390.6 536 43.5
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 2.7e-106 390.2 555 40.0
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.7e-103 379.8 497 43.5
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 6.3e-103 379.0 584 38.5
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.1e-102 378.3 564 40.8
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 1.8e-102 377.5 513 43.3
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 1.2e-101 374.8 572 39.7
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 2.0e-101 374.0 561 39.0
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 3.5e-101 373.2 560 39.5
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 4.5e-101 372.9 551 39.7
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 5.9e-101 372.5 583 39.8
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 7.7e-101 372.1 568 39.8
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 1.3e-100 371.3 473 43.8
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 2.2e-100 370.5 560 40.4
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.2e-100 370.5 579 39.6
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 2.9e-100 370.2 570 39.8
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 2.9e-100 370.2 551 39.9
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 2.9e-100 370.2 627 38.8
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 5.0e-100 369.4 511 40.9
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 5.0e-100 369.4 511 41.1
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 6.5e-100 369.0 555 39.5
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 1.1e-99 368.2 549 39.2
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 4.2e-99 366.3 517 42.4
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 4.2e-99 366.3 511 40.5
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 5.5e-99 365.9 550 39.5
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 2.7e-98 363.6 552 39.3
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 4.7e-98 362.8 515 41.6
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 6.1e-98 362.5 488 45.3
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.0e-97 361.7 567 40.2
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.8e-97 360.9 569 38.8
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 1.8e-97 360.9 558 40.1
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.7e-97 359.0 559 39.9
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 6.7e-97 359.0 554 37.4
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 8.8e-97 358.6 561 39.9
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 2.6e-96 357.1 545 40.4
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 2.6e-96 357.1 560 40.0
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 3.3e-96 356.7 545 39.4
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 7.4e-96 355.5 551 39.2
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 7.4e-96 355.5 595 38.0
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 1.3e-95 354.8 550 37.8
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 1.3e-95 354.8 562 39.7
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 1.7e-95 354.4 551 39.2
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 3.7e-95 353.2 558 38.7
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 4.8e-95 352.8 551 39.0
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 1.1e-94 351.7 562 39.3
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.4e-94 351.3 523 40.2
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 3.5e-93 346.7 596 37.4
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 4.5e-93 346.3 558 39.1
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.0e-92 345.1 504 41.5
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 2.2e-92 344.0 544 38.4
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 5.0e-92 342.8 604 38.9
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 2.5e-91 340.5 491 40.9
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 6.8e-89 332.4 562 36.8
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 2.8e-87 327.0 553 37.1
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 2.8e-87 327.0 553 37.1
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.8e-87 327.0 508 40.6
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.8e-86 324.3 503 38.6
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 7.7e-85 318.9 554 36.5
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.8e-84 316.6 366 47.5
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 3.2e-83 313.5 457 40.9
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 6.3e-79 299.3 460 40.0
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 1.6e-77 294.7 552 35.9
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 5.9e-77 292.7 385 42.6
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 6.1e-74 282.7 384 45.1
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 2.7e-61 240.7 374 41.2
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 1.4e-57 228.4 393 35.9
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 3.4e-56 223.8 302 42.1
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 1.6e-50 204.9 503 31.2
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.8e-49 201.4 335 40.0
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.1e-38 165.6 356 34.6
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 2.4e-30 137.9 195 40.5
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.6e-26 124.0 164 42.1
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 2.0e-24 118.2 160 42.5
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.2e-21 109.0 193 31.6
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.9e-14 85.1 125 41.6
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 2.1e-13 81.6 73 49.3
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 1.4e-09 68.9 165 30.3
Cre07.g345200 Chlamydomonas reinhardtii HOM05D036030 ORTHO05D141829 1.1e-06 59.3 298 24.8


User provided reference genes

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