Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 0.0e+00 1088.9 546 100.0
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 6.6e-142 508.4 365 69.6
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.6e-142 508.1 328 75.9
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.5e-141 507.3 345 73.0
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.9e-141 506.9 328 75.6
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.9e-141 506.9 328 75.6
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.9e-141 506.9 328 75.6
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 1.8e-139 500.4 361 68.4
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 6.8e-139 498.4 361 68.1
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 8.9e-139 498.0 361 69.3
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.5e-138 497.3 298 79.2
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.0e-138 496.9 360 67.5
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 2.6e-138 496.5 360 68.9
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 3.4e-138 496.1 276 83.3
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 5.8e-138 495.4 344 70.6
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 5.8e-138 495.4 272 83.8
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 5.8e-138 495.4 343 70.6
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 7.6e-138 495.0 273 84.2
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 1.3e-137 494.2 306 77.5
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.3e-137 494.2 319 74.6
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 1.3e-137 494.2 351 70.4
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.3e-137 494.2 292 79.5
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.7e-137 493.8 363 67.8
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.7e-137 493.8 301 78.1
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.7e-137 493.8 361 67.6
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 2.2e-137 493.4 297 78.5
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.8e-137 492.7 273 83.2
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.8e-137 492.7 276 83.0
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.8e-137 492.7 276 83.0
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 3.8e-137 492.7 301 77.7
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 3.8e-137 492.7 372 65.6
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.8e-137 492.7 362 66.9
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.9e-137 492.3 276 82.6
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 4.9e-137 492.3 273 83.5
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.9e-137 492.3 289 79.9
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 4.9e-137 492.3 271 84.9
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 6.4e-137 491.9 271 84.1
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 8.4e-137 491.5 363 66.7
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-136 491.1 289 79.9
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 1.9e-136 490.3 362 68.0
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.9e-136 490.3 345 71.3
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 2.4e-136 490.0 268 84.7
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.4e-136 490.0 363 67.2
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 2.4e-136 490.0 293 78.2
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.2e-136 489.6 273 83.2
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 3.2e-136 489.6 340 70.6
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 3.2e-136 489.6 340 70.6
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 3.2e-136 489.6 281 78.6
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 4.1e-136 489.2 362 66.9
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 4.1e-136 489.2 273 83.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 5.4e-136 488.8 268 84.0
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 5.4e-136 488.8 358 68.2
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 5.4e-136 488.8 298 76.8
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 5.4e-136 488.8 267 84.3
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 5.4e-136 488.8 266 84.6
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 7.1e-136 488.4 308 77.9
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 7.1e-136 488.4 266 85.0
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 7.1e-136 488.4 266 85.0
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 7.1e-136 488.4 302 76.5
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.2e-135 487.6 294 77.2
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.6e-135 487.3 289 79.2
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.6e-135 487.3 266 84.6
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.6e-135 487.3 364 66.5
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.6e-135 487.3 275 81.5
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 2.1e-135 486.9 324 73.8
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 2.1e-135 486.9 276 81.2
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 2.1e-135 486.9 358 67.6
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 2.1e-135 486.9 362 67.1
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 2.7e-135 486.5 275 81.8
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 2.7e-135 486.5 285 79.6
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 2.7e-135 486.5 363 66.1
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 2.7e-135 486.5 301 76.7
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 3.5e-135 486.1 363 67.8
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 3.5e-135 486.1 313 74.1
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 4.6e-135 485.7 364 67.3
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 7.8e-135 485.0 266 84.2
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 7.8e-135 485.0 365 67.7
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.3e-134 484.2 285 80.4
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.7e-134 483.8 292 78.1
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 2.3e-134 483.4 303 75.9
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.3e-134 483.4 365 67.4
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 3.0e-134 483.0 365 66.0
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 3.0e-134 483.0 301 75.4
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 3.0e-134 483.0 363 65.6
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 3.9e-134 482.6 263 84.4
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 5.1e-134 482.3 295 76.9
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 5.1e-134 482.3 363 66.9
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 5.1e-134 482.3 348 67.5
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 5.1e-134 482.3 325 72.0
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 6.6e-134 481.9 267 83.1
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 6.6e-134 481.9 280 79.6
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 8.6e-134 481.5 291 78.0
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.1e-133 481.1 293 77.8
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.1e-133 481.1 363 66.1
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 1.9e-133 480.3 363 67.8
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.5e-133 479.9 367 65.7
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.5e-133 479.9 363 65.8
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 2.5e-133 479.9 295 77.6
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 9.6e-133 478.0 294 77.9
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 2.8e-132 476.5 361 66.5
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 3.6e-132 476.1 295 76.9
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 3.6e-132 476.1 265 83.0
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 8.1e-132 474.9 362 65.2
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-131 474.6 285 78.9
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.5e-130 470.7 277 78.7
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 3.4e-130 469.5 290 75.2
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 2.9e-129 466.5 262 81.7
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.7e-126 454.9 259 80.7
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 5.8e-122 442.2 265 75.1
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 2.5e-117 426.8 261 72.0
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 4.3e-117 426.0 268 75.7
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 9.0e-115 418.3 276 67.0
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 7.1e-112 408.7 366 57.4
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.9e-96 357.5 237 72.2
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 9.7e-93 345.1 264 64.0
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 7.7e-90 335.5 276 63.4
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 1.4e-83 314.7 159 91.8
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.2e-82 311.6 159 89.9
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.7e-57 228.0 195 59.0
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 5.2e-54 216.5 130 77.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 3.0e-25 120.9 170 42.4
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.2e-15 89.0 44 86.4
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 4.4e-13 80.5 59 64.4
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 2.5e-08 64.7 128 34.4
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.6e-07 62.0 153 29.4
Sabra03G0087300 Salix brachista HOM05D000776 ORTHO05D001624 1.6e-07 62.0 172 26.7
arahy.Tifrunner.gnm1.ann1.756MKY Arachis hypogaea HOM05D000776 ORTHO05D001624 4.8e-07 60.5 156 27.6
Potri.003G123700 Populus trichocarpa HOM05D000776 ORTHO05D001624 4.8e-07 60.5 172 26.2
arahy.Tifrunner.gnm1.ann1.1LQ7DN Arachis hypogaea HOM05D000776 ORTHO05D001624 6.2e-07 60.1 156 27.6
CSS0022914 Camellia sinensis var. sinensis HOM05D000776 ORTHO05D001624 6.2e-07 60.1 174 28.2
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 6.2e-07 60.1 178 28.7
SalBow1G1568 Salvia bowleyana HOM05D000776 ORTHO05D001624 6.2e-07 60.1 159 25.2
Cc08_g14210 Coffea canephora HOM05D000776 ORTHO05D001624 8.1e-07 59.7 160 26.9
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 8.1e-07 59.7 127 31.5
MSTRG.13831 Avicennia marina HOM05D000776 ORTHO05D001624 1.1e-06 59.3 156 25.6
Dinv37670 Davidia involucrata HOM05D000776 ORTHO05D001624 1.4e-06 58.9 179 27.4
SGA_v2.0_scaffold144G35964 Striga asiatica HOM05D000776 ORTHO05D001624 1.8e-06 58.5 160 26.9
Aa31LG2G650 Aethionema arabicum HOM05D000776 ORTHO05D001624 4.0e-06 57.4 149 24.2
AUR62010630 Chenopodium quinoa HOM05D000776 ORTHO05D001624 4.0e-06 57.4 164 25.0
AUR62017273 Chenopodium quinoa HOM05D000776 ORTHO05D001624 4.0e-06 57.4 164 25.0
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 4.0e-06 57.4 158 26.6
Manes.01G065100 Manihot esculenta HOM05D000776 ORTHO05D001624 4.0e-06 57.4 151 26.5
Cpa.g.sc74.69 Carica papaya HOM05D000776 ORTHO05D001624 6.9e-06 56.6 156 25.0
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 9.0e-06 56.2 151 29.8


User provided reference genes

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