Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22282 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.8e-189 666.8 679 100.0
SEGI_27814 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.5e-90 338.2 687 71.2
SEGI_27931 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.4e-66 256.1 501 61.1
SEGI_35972 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.6e-65 255.0 508 72.6
SEGI_05036 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.4e-64 251.9 653 72.0
SEGI_22688 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.5e-44 184.1 463 53.1
SEGI_01075 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 4.3e-34 150.6 723 61.0
SEGI_38663 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.4e-26 123.2 537 58.8
SEGI_13181 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.2e-25 119.8 699 57.2
SEGI_17770 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.0e-22 112.8 79 69.6
SEGI_25326 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.2e-22 111.7 513 63.5
SEGI_16220 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 3.6e-20 104.4 628 46.7
SEGI_33735 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.8e-19 99.8 215 68.8
SEGI_07878 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.6e-18 98.2 632 50.8
SEGI_31982 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.2e-17 93.2 609 53.0
SEGI_22325 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.2e-14 85.1 371 59.6
SEGI_12792 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.9e-14 84.7 383 57.2
SEGI_06646 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 4.0e-11 74.3 347 47.8
PSO144G0110 Papaver somniferum HOM05D000071 ORTHO05D003524 3.4e-10 71.2 143 53.1
SEGI_39891 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 5.7e-10 70.5 53 64.2
SEGI_33040 Sequoiadendron giganteum HOM05D000004 ORTHO05D011908 7.5e-10 70.1 56 62.5
PSO782G2967 Papaver somniferum HOM05D000071 ORTHO05D003524 2.8e-09 68.2 96 38.5
SEGI_13728 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 4.8e-09 67.4 162 33.3
SEGI_35217 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.1e-08 66.2 143 36.4
SEGI_24216 Sequoiadendron giganteum HOM05D051108 ORTHO05D011908 4.1e-08 64.3 83 39.8
CsaV3_3G032000 Cucumis sativus L. HOM05D000071 ORTHO05D000029 5.4e-08 63.9 401 27.4
SEGI_40972 Sequoiadendron giganteum HOM05D000053 ORTHO05D000029 5.4e-08 63.9 92 39.1
ATR0184G035 Amborella trichopoda HOM05D000311 ORTHO05D000183 7.0e-08 63.5 150 31.3
Ciclev10027016m.g Citrus clementina HOM05D000311 ORTHO05D000183 7.0e-08 63.5 143 30.8
PSO566G0174 Papaver somniferum HOM05D000071 ORTHO05D003524 7.0e-08 63.5 96 36.5
SEGI_05400 Sequoiadendron giganteum HOM05D000002 ORTHO05D011908 7.0e-08 63.5 80 42.5
ATR0709G014 Amborella trichopoda HOM05D000071 ORTHO05D000029 1.2e-07 62.8 308 29.5
RcHm_v2.0_Chr5g0015191 Rosa chinensis HOM05D000071 ORTHO05D000029 1.2e-07 62.8 70 42.9
TWI09G0221 Tripterygium wilfordii HOM05D000071 ORTHO05D000029 1.6e-07 62.4 160 26.2
MBI18_g17975_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 2.0e-07 62.0 152 32.2
PSO732G0467 Papaver somniferum HOM05D000071 ORTHO05D003524 2.0e-07 62.0 88 38.6
GSVIVG01017399001 Vitis vinifera HOM05D000311 ORTHO05D000183 2.7e-07 61.6 146 39.7
SEGI_02883 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 3.5e-07 61.2 71 46.5
MELO3C023993.2 Cucumis melo HOM05D000071 ORTHO05D000029 4.5e-07 60.8 401 27.4
Glyma.01G126900 Glycine max HOM05D000053 ORTHO05D000448 5.9e-07 60.5 144 33.3
ClCG10G012210 Citrullus lanatus HOM05D000071 ORTHO05D000029 7.7e-07 60.1 401 30.9
QL08p015903 Quercus lobata HOM05D000053 ORTHO05D000448 7.7e-07 60.1 89 34.8
VMungo1383G1852 Vigna mungo HOM05D000053 ORTHO05D000035 7.7e-07 60.1 94 31.9
Lsat_1_v5_gn_1_29741 Lactuca sativa HOM05D000311 ORTHO05D000183 1.0e-06 59.7 153 27.5
TPR.G31998 Trifolium pratense HOM05D000311 ORTHO05D000183 1.0e-06 59.7 151 30.5
CAN.G219.46 Capsicum annuum HOM05D000071 ORTHO05D000029 1.3e-06 59.3 153 35.3
DCAR_029693 Daucus carota HOM05D000071 ORTHO05D000029 1.3e-06 59.3 156 26.9
SEGI_22504 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.3e-06 59.3 318 40.3
CSS0024140 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D003524 1.7e-06 58.9 96 32.3
Duzib212G1039 Durio zibethinus HOM05D000053 ORTHO05D000448 1.7e-06 58.9 78 34.6
arahy.Tifrunner.gnm1.ann1.37DISZ Arachis hypogaea HOM05D000517 ORTHO05D003374 2.2e-06 58.5 95 41.1
arahy.Tifrunner.gnm1.ann1.8DLF81 Arachis hypogaea HOM05D000517 ORTHO05D003374 2.2e-06 58.5 95 41.1
COL.COLO4_20366 Corchorus olitorius HOM05D000071 ORTHO05D000029 2.2e-06 58.5 70 40.0
Dinv02377 Davidia involucrata HOM05D000071 ORTHO05D000029 2.2e-06 58.5 75 38.7
Eucgr.C04311 Eucalyptus grandis HOM05D000311 ORTHO05D000183 2.2e-06 58.5 161 27.3
PGR083G1345 Punica granatum HOM05D000053 ORTHO05D000035 2.2e-06 58.5 80 40.0
GSVIVG01001803001 Vitis vinifera HOM05D000071 ORTHO05D000029 2.2e-06 58.5 72 43.1
Zm00001eb009640 Zea mays HOM05D000029 ORTHO05D000854 2.2e-06 58.5 97 36.1
Migut.J00128 Erythranthe guttata HOM05D000053 ORTHO05D000448 3.8e-06 57.8 165 29.1
MBI04_g21137_MAGBIO Magnolia biondii HOM05D000311 ORTHO05D000183 3.8e-06 57.8 151 31.8
Oeu063386.1 Olea europaea HOM05D000053 ORTHO05D000448 3.8e-06 57.8 84 40.5
SalBow5G2318 Salvia bowleyana HOM05D000053 ORTHO05D000448 3.8e-06 57.8 94 36.2
SEGI_29904 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.8e-06 57.8 161 36.0
Ciclev10033817m.g Citrus clementina HOM05D000071 ORTHO05D000029 5.0e-06 57.4 150 26.0
FAN06G3944 Fragaria x ananassa HOM05D000071 ORTHO05D000029 5.0e-06 57.4 71 38.0
MD04G1159500 Malus domestica HOM05D000053 ORTHO05D000448 5.0e-06 57.4 86 36.0
Manes.10G136600 Manihot esculenta HOM05D000071 ORTHO05D000029 5.0e-06 57.4 80 35.0
Prupe.4G122600 Prunus persica HOM05D000071 ORTHO05D000029 5.0e-06 57.4 70 38.6
Prupe.4G122900 Prunus persica HOM05D000071 ORTHO05D000029 5.0e-06 57.4 70 38.6
SEGI_00886 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 5.0e-06 57.4 100 62.0
SEGI_41564 Sequoiadendron giganteum HOM05D000071 ORTHO05D000448 5.0e-06 57.4 149 34.2
Eucgr.B00682 Eucalyptus grandis HOM05D000053 ORTHO05D000035 6.5e-06 57.0 140 34.3
Gohir.A04G108800 Gossypium hirsutum HOM05D000311 ORTHO05D000183 6.5e-06 57.0 155 34.8
Manes.15G086501 Manihot esculenta HOM05D000071 ORTHO05D003524 6.5e-06 57.0 356 37.1
Dinv00308 Davidia involucrata HOM05D000071 ORTHO05D000029 8.5e-06 56.6 91 36.3
Duzib212G0932 Durio zibethinus HOM05D000053 ORTHO05D000448 8.5e-06 56.6 78 34.6
Nitab4.5_0004940g0020 Nicotiana tabacum HOM05D000053 ORTHO05D000448 8.5e-06 56.6 148 30.4
PSO384G3601 Papaver somniferum HOM05D000071 ORTHO05D003524 8.5e-06 56.6 96 33.3
QL05p051666 Quercus lobata HOM05D000054 ORTHO05D000171 8.5e-06 56.6 94 35.1
SEGI_33106 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.5e-06 56.6 38 76.3


User provided reference genes

Program Settings