Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22183 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 3.3e-206 721.5 368 100.0
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 7.1e-15 85.9 173 32.9
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 9.3e-15 85.5 196 34.7
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 1.2e-14 85.1 276 28.3
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 1.2e-14 85.1 192 34.4
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 1.6e-14 84.7 314 29.0
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 4.6e-14 83.2 186 32.3
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 4.6e-14 83.2 242 29.8
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 6.0e-14 82.8 264 27.7
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 1.8e-13 81.3 265 28.3
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 1.8e-13 81.3 193 32.6
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 5.1e-13 79.7 284 27.8
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 5.1e-13 79.7 192 33.3
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 5.1e-13 79.7 266 29.7
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 6.7e-13 79.3 208 29.8
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.1e-12 78.6 376 27.4
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.5e-12 78.2 276 27.5
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 1.9e-12 77.8 219 29.2
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 7.4e-12 75.9 288 27.4
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 1.3e-11 75.1 269 29.0
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 1.3e-11 75.1 206 28.6
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 1.6e-11 74.7 255 27.8
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 1.6e-11 74.7 225 31.6
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 2.1e-11 74.3 312 27.2
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 2.1e-11 74.3 224 32.1
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 2.8e-11 73.9 242 27.3
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 2.8e-11 73.9 335 26.6
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 3.7e-11 73.6 209 29.2
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 4.8e-11 73.2 303 27.7
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 4.8e-11 73.2 351 25.9
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 6.2e-11 72.8 325 28.0
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 1.1e-10 72.0 221 30.3
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 1.1e-10 72.0 206 28.6
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 1.4e-10 71.6 198 28.3
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.4e-10 70.9 359 25.6
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 3.1e-10 70.5 217 29.0
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.1e-10 70.5 307 25.7
MBI06_g46582_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 4.0e-10 70.1 151 33.8
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 5.3e-10 69.7 305 25.6
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 5.3e-10 69.7 262 27.9
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 6.9e-10 69.3 218 29.4
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 6.9e-10 69.3 291 26.5
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 6.9e-10 69.3 376 24.7
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 6.9e-10 69.3 290 27.6
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 1.2e-09 68.6 264 25.0
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 1.2e-09 68.6 298 26.5
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 1.2e-09 68.6 307 25.4
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.2e-09 68.6 307 25.4
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.5e-09 68.2 307 25.4
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 2.6e-09 67.4 251 26.3
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 4.5e-09 66.6 374 24.1
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 4.5e-09 66.6 167 34.1
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 5.8e-09 66.2 313 25.6
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.0e-08 65.5 344 25.9
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 1.3e-08 65.1 339 25.4
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 1.3e-08 65.1 393 26.5
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 1.7e-08 64.7 328 25.9
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 3.8e-08 63.5 297 27.3
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 4.9e-08 63.2 346 27.5
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 8.4e-08 62.4 400 23.0
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 1.1e-07 62.0 244 27.5
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 1.1e-07 62.0 244 27.5
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 1.1e-07 62.0 328 24.1
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 2.5e-07 60.8 307 27.0
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 3.2e-07 60.5 247 25.1
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 4.2e-07 60.1 244 27.5
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 5.5e-07 59.7 246 23.6
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 9.3e-07 58.9 314 23.6
BcaC08g45164 Brassica carinata HOM05D005676 ORTHO05D007375 1.2e-06 58.5 246 25.2
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 1.2e-06 58.5 263 23.6
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 2.1e-06 57.8 372 24.2
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 2.7e-06 57.4 233 28.3
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 6.1e-06 56.2 303 26.7
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 7.9e-06 55.8 375 23.7


User provided reference genes

Program Settings