Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22129 Sequoiadendron giganteum HOM05D000290 ORTHO05D002418 2.1e-92 342.4 185 100.0
Os02g0575500 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D002418 8.3e-12 74.7 91 52.7
PSO675G7818 Papaver somniferum HOM05D000290 ORTHO05D002418 1.4e-11 73.9 91 49.5
MD01G1017900 Malus domestica HOM05D000290 ORTHO05D002418 2.4e-11 73.2 88 52.3
COL.COLO4_11032 Corchorus olitorius HOM05D000290 ORTHO05D002418 3.1e-11 72.8 86 52.3
FAN19G1951 Fragaria x ananassa HOM05D000290 ORTHO05D002418 3.1e-11 72.8 88 50.0
AUR62016263 Chenopodium quinoa HOM05D000290 ORTHO05D002418 4.1e-11 72.4 88 52.3
Duzib147G0442 Durio zibethinus HOM05D000290 ORTHO05D002418 4.1e-11 72.4 86 51.2
FvH4_1g22080 Fragaria vesca HOM05D000290 ORTHO05D002418 4.1e-11 72.4 88 50.0
FAN28G0415 Fragaria x ananassa HOM05D000290 ORTHO05D002418 4.1e-11 72.4 88 50.0
Glyma.04G220200 Glycine max HOM05D000290 ORTHO05D002418 4.1e-11 72.4 88 50.0
Aqoxy6G00498 Aquilegia oxysepala HOM05D000290 ORTHO05D002418 5.4e-11 72.0 91 50.5
RcHm_v2.0_Chr2g0116161 Rosa chinensis HOM05D000290 ORTHO05D002418 5.4e-11 72.0 88 50.0
ATR0564G333 Amborella trichopoda HOM05D000290 ORTHO05D002418 7.0e-11 71.6 88 51.1
Glyma.06G145700 Glycine max HOM05D000290 ORTHO05D002418 7.0e-11 71.6 88 48.9
Thecc.01G110800 Theobroma cacao HOM05D000290 ORTHO05D002418 7.0e-11 71.6 86 51.2
Lj1g0021046 Lotus japonicus HOM05D000290 ORTHO05D002418 9.1e-11 71.2 88 51.1
TAR628G0248 Trochodendron aralioides HOM05D000290 ORTHO05D002418 9.1e-11 71.2 88 51.1
Atru.chr4.398 Acer truncatum HOM05D000290 ORTHO05D002418 1.2e-10 70.9 86 52.3
Ca_16887_v3 Cicer arietinum L. HOM05D000290 ORTHO05D002418 1.2e-10 70.9 88 50.0
Gohir.A02G133800 Gossypium hirsutum HOM05D000290 ORTHO05D002418 1.2e-10 70.9 88 50.0
Ciclev10024947m.g Citrus clementina HOM05D000290 ORTHO05D002418 1.6e-10 70.5 86 52.3
Gorai.003G046300 Gossypium raimondii HOM05D000290 ORTHO05D002418 1.6e-10 70.5 88 50.0
Lj4g0021892 Lotus japonicus HOM05D000290 ORTHO05D002418 1.6e-10 70.5 88 48.9
Prupe.6G175300 Prunus persica HOM05D000290 ORTHO05D002418 1.6e-10 70.5 88 51.1
Dinv19505 Davidia involucrata HOM05D000290 ORTHO05D002418 2.0e-10 70.1 88 50.0
Gohir.D03G045200 Gossypium hirsutum HOM05D000290 ORTHO05D002418 2.0e-10 70.1 88 50.0
Manes.12G141200 Manihot esculenta HOM05D000290 ORTHO05D002418 2.0e-10 70.1 86 51.2
Medtr3g094740 Medicago truncatula HOM05D000290 ORTHO05D002418 2.0e-10 70.1 88 50.0
Hund03547 Selenicereus undatus HOM05D000290 ORTHO05D002418 2.0e-10 70.1 91 49.5
AUR62003319 Chenopodium quinoa HOM05D000290 ORTHO05D002418 2.7e-10 69.7 88 51.1
TPR.G23736 Trifolium pratense HOM05D000290 ORTHO05D002418 2.7e-10 69.7 88 48.9
TWI77G0161 Tripterygium wilfordii HOM05D000290 ORTHO05D002418 2.7e-10 69.7 88 50.0
MELO3C007801.2 Cucumis melo HOM05D000290 ORTHO05D002418 3.5e-10 69.3 88 50.0
Lalb_Chr13g0296171 Lupinus albus HOM05D000290 ORTHO05D002418 3.5e-10 69.3 88 48.9
Sabra07G0069100 Salix brachista HOM05D000290 ORTHO05D002418 3.5e-10 69.3 86 52.3
TWI74G1368 Tripterygium wilfordii HOM05D000290 ORTHO05D002418 3.5e-10 69.3 86 51.2
ClCG01G019260 Citrullus lanatus HOM05D000290 ORTHO05D002418 4.5e-10 68.9 88 50.0
Lalb_Chr12g0203571 Lupinus albus HOM05D000290 ORTHO05D002418 4.5e-10 68.9 88 50.0
Psat7g063560 Pisum sativum HOM05D000290 ORTHO05D002418 4.5e-10 68.9 88 48.9
Potri.007G082500 Populus trichocarpa HOM05D000290 ORTHO05D002418 4.5e-10 68.9 86 52.3
Glyma.05G183100 Glycine max HOM05D000290 ORTHO05D002418 5.9e-10 68.6 88 48.9
Lj2A562G40 Lonicera japonica HOM05D000290 ORTHO05D002418 5.9e-10 68.6 88 50.0
Mapoly0001s0423 Marchantia polymorpha HOM05D000290 ORTHO05D002418 5.9e-10 68.6 88 48.9
Phvul.009G140432 Phaseolus vulgaris HOM05D000290 ORTHO05D002418 5.9e-10 68.6 88 47.7
Haze_25028 Corylus avellana HOM05D000290 ORTHO05D002418 7.7e-10 68.2 88 48.9
PGR004G2785 Punica granatum HOM05D000290 ORTHO05D002418 7.7e-10 68.2 88 48.9
PGR102G0057 Punica granatum HOM05D000290 ORTHO05D002418 7.7e-10 68.2 88 48.9
GSVIVG01022210001 Vitis vinifera HOM05D000290 ORTHO05D002418 7.7e-10 68.2 88 48.9
AT5G64940 Arabidopsis thaliana HOM05D000290 ORTHO05D002418 1.3e-09 67.4 91 48.4
CSS0019128 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D002418 1.3e-09 67.4 86 48.8
CiPaw.03G135100 Carya illinoinensis HOM05D000290 ORTHO05D002418 1.3e-09 67.4 88 47.7
CsaV3_6G045940 Cucumis sativus L. HOM05D000290 ORTHO05D002418 1.3e-09 67.4 88 48.9
ECA238G4461 Erigeron canadensis HOM05D000290 ORTHO05D002418 1.3e-09 67.4 88 51.1
Hma1.2p1_0070F.1_g037540 Hydrangea macrophylla HOM05D000290 ORTHO05D002418 1.3e-09 67.4 88 48.9
Solyc04g054190.3 Solanum lycopersicum HOM05D000290 ORTHO05D002418 1.3e-09 67.4 88 47.7
AL8G42440 Arabidopsis lyrata HOM05D000290 ORTHO05D002418 1.7e-09 67.0 91 47.3
CANSAT01G1322 Cannabis sativa HOM05D000290 ORTHO05D002418 1.7e-09 67.0 88 48.9
Carub.0008s2577 Capsella rubella HOM05D000290 ORTHO05D002418 1.7e-09 67.0 91 47.3
Glyma.08G140900 Glycine max HOM05D000290 ORTHO05D002418 1.7e-09 67.0 88 47.7
Sc16g0004190 Simmondsia chinensis HOM05D000290 ORTHO05D002418 1.7e-09 67.0 88 48.9
unitig_0.g1736 Utricularia gibba HOM05D000290 ORTHO05D002418 1.7e-09 67.0 88 51.1
EL10Ac6g14732 Beta vulgaris HOM05D000290 ORTHO05D002418 2.3e-09 66.6 88 48.9
Cc07_g16030 Coffea canephora HOM05D000290 ORTHO05D002418 2.3e-09 66.6 88 50.0
Nitab4.5_0000156g0150 Nicotiana tabacum HOM05D000290 ORTHO05D002418 2.3e-09 66.6 88 48.9
Peaxi162Scf01006g00026 Petunia axillaris HOM05D000290 ORTHO05D002418 2.3e-09 66.6 88 48.9
Sopen04g023660 Solanum pennellii HOM05D000290 ORTHO05D002418 2.3e-09 66.6 88 46.6
Actinidia33364 Actinidia chinensis HOM05D000290 ORTHO05D002418 2.9e-09 66.2 88 48.9
BcaC01g02725 Brassica carinata HOM05D000290 ORTHO05D002418 2.9e-09 66.2 91 46.2
A06p31730 Brassica napus HOM05D000290 ORTHO05D002418 2.9e-09 66.2 91 46.2
C03p61250 Brassica napus HOM05D000290 ORTHO05D002418 2.9e-09 66.2 91 46.2
BolC3t18386H Brassica oleracea HOM05D000290 ORTHO05D002418 2.9e-09 66.2 91 46.2
BraA06t26106Z Brassica rapa HOM05D000290 ORTHO05D002418 2.9e-09 66.2 91 46.2
Ca_17701_v3 Cicer arietinum L. HOM05D000290 ORTHO05D002418 2.9e-09 66.2 88 48.9
Thhalv10003690m.g Eutrema salsugineum HOM05D000290 ORTHO05D002418 2.9e-09 66.2 91 46.2
Medtr8g091710 Medicago truncatula HOM05D000290 ORTHO05D002418 2.9e-09 66.2 88 47.7
QL06p032420 Quercus lobata HOM05D000290 ORTHO05D002418 2.9e-09 66.2 88 48.9
SMO361G0768 Selaginella moellendorffii HOM05D000290 ORTHO05D002418 2.9e-09 66.2 88 46.6
AagrBONN_evm.TU.Sc2ySwM_344.1524 Anthoceros agrestis HOM05D000290 ORTHO05D002418 3.8e-09 65.9 88 45.5
CARHR293830 Cardamine hirsuta HOM05D000290 ORTHO05D002418 3.8e-09 65.9 91 46.2
CiPaw.04G092900 Carya illinoinensis HOM05D000290 ORTHO05D002418 3.8e-09 65.9 88 47.7
Phvul.002G264200 Phaseolus vulgaris HOM05D000290 ORTHO05D002418 3.8e-09 65.9 88 46.6
Potri.005G083200 Populus trichocarpa HOM05D000290 ORTHO05D002418 3.8e-09 65.9 86 50.0
BcaB02g09843 Brassica carinata HOM05D000290 ORTHO05D002418 5.0e-09 65.5 88 47.7
CAN.G267.22 Capsicum annuum HOM05D000290 ORTHO05D002418 5.0e-09 65.5 88 46.6
DCAR_011445 Daucus carota HOM05D000290 ORTHO05D002418 5.0e-09 65.5 86 52.3
FAN23G0918 Fragaria x ananassa HOM05D000290 ORTHO05D002418 5.0e-09 65.5 108 41.7
FAN26G1302 Fragaria x ananassa HOM05D000290 ORTHO05D002418 5.0e-09 65.5 108 41.7
Nn5g28931 Nelumbo nucifera HOM05D000290 ORTHO05D002418 5.0e-09 65.5 88 46.6
Nitab4.5_0004814g0010 Nicotiana tabacum HOM05D000290 ORTHO05D002418 5.0e-09 65.5 88 47.7
Sp2g28020 Schrenkiella parvula HOM05D000290 ORTHO05D002418 5.0e-09 65.5 88 47.7
THA.LOC104799212 Tarenaya hassleriana HOM05D000290 ORTHO05D002418 5.0e-09 65.5 86 46.5
Psat7g051880 Pisum sativum HOM05D000290 ORTHO05D002418 6.5e-09 65.1 88 46.6
Sed0011702 Sechium edule HOM05D000290 ORTHO05D002418 6.5e-09 65.1 88 46.6
Zm00001eb244840 Zea mays HOM05D000290 ORTHO05D002418 6.5e-09 65.1 91 48.4
SGA_v2.0_scaffold47G17723 Striga asiatica HOM05D000290 ORTHO05D002418 8.6e-09 64.7 88 46.6
VMungo0251G3264 Vigna mungo HOM05D000290 ORTHO05D002418 8.6e-09 64.7 88 45.5
Aa31LG1G17030 Aethionema arabicum HOM05D000290 ORTHO05D002418 1.5e-08 63.9 88 46.6
Ah.03g149280 Amaranthus hybridus HOM05D000290 ORTHO05D002418 1.5e-08 63.9 88 47.7
arahy.Tifrunner.gnm1.ann1.T0HPDF Arachis hypogaea HOM05D000290 ORTHO05D002418 1.5e-08 63.9 88 45.5
SalBow6G0294 Salvia bowleyana HOM05D000290 ORTHO05D002418 1.5e-08 63.9 88 46.6
SalBow6G4085 Salvia bowleyana HOM05D000290 ORTHO05D002418 1.5e-08 63.9 88 46.6
MSTRG.3805 Avicennia marina HOM05D000290 ORTHO05D002418 1.9e-08 63.5 88 46.6
Migut.H02416 Erythranthe guttata HOM05D000290 ORTHO05D002418 1.9e-08 63.5 88 46.6
Sabra05G0068300 Salix brachista HOM05D000290 ORTHO05D002418 1.9e-08 63.5 105 41.9
CDE05G2915 Ceratophyllum demersum HOM05D000290 ORTHO05D002418 2.5e-08 63.2 88 46.6
Rhsim08G0007800 Rhododendron simsii HOM05D000290 ORTHO05D002418 2.5e-08 63.2 88 45.5
arahy.Tifrunner.gnm1.ann1.S3R8GT Arachis hypogaea HOM05D000290 ORTHO05D002418 4.2e-08 62.4 88 44.3
Pp3c15_3930 Physcomitrium patens HOM05D000290 ORTHO05D002418 1.6e-07 60.5 91 41.8
MD15G1334400 Malus domestica HOM05D000290 ORTHO05D002418 2.1e-07 60.1 77 50.6
SalBow5G0667 Salvia bowleyana HOM05D000290 ORTHO05D002418 3.6e-07 59.3 83 47.0
Pp3c9_4350 Physcomitrium patens HOM05D000290 ORTHO05D002418 8.0e-07 58.2 91 39.6
HPP92_016464 Vanilla planifolia HOM05D000290 ORTHO05D002418 8.0e-07 58.2 80 45.0
HPP92_027145 Vanilla planifolia HOM05D000290 ORTHO05D002418 1.4e-06 57.4 77 45.5
Oeu028382.3 Olea europaea HOM05D000290 ORTHO05D002418 8.8e-06 54.7 100 40.0


User provided reference genes

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