Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 2.5e-119 432.2 224 100.0
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.5e-68 263.5 138 100.0
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 4.3e-47 192.2 138 68.1
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 3.6e-46 189.1 138 67.4
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 6.2e-46 188.3 137 68.6
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 1.1e-45 187.6 138 66.7
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 1.4e-45 187.2 137 69.3
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 1.8e-45 186.8 137 68.6
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 1.8e-45 186.8 137 70.8
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 1.8e-45 186.8 137 69.3
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 2.4e-45 186.4 137 67.2
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.4e-45 186.4 137 67.2
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 2.4e-45 186.4 137 70.8
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 3.1e-45 186.0 137 68.6
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 5.3e-45 185.3 137 67.2
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 6.9e-45 184.9 137 68.6
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 6.9e-45 184.9 146 65.1
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 6.9e-45 184.9 137 66.4
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 9.0e-45 184.5 137 70.1
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 9.0e-45 184.5 134 69.4
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 1.2e-44 184.1 137 69.3
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 3.4e-44 182.6 137 67.2
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 4.4e-44 182.2 137 67.9
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 5.8e-44 181.8 131 69.5
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 5.8e-44 181.8 137 69.3
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 7.6e-44 181.4 142 66.9
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 7.6e-44 181.4 138 63.8
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 9.9e-44 181.0 137 67.9
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.3e-43 180.6 137 65.7
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 1.3e-43 180.6 137 67.2
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.7e-43 180.3 137 67.9
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 1.7e-43 180.3 137 68.6
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 1.7e-43 180.3 137 67.2
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 2.2e-43 179.9 140 67.1
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 2.2e-43 179.9 137 67.2
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 2.9e-43 179.5 139 66.2
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 2.9e-43 179.5 137 66.4
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 2.9e-43 179.5 137 65.7
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 2.9e-43 179.5 137 65.7
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 2.9e-43 179.5 137 65.0
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 2.9e-43 179.5 137 66.4
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 2.9e-43 179.5 137 65.7
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 3.8e-43 179.1 137 65.0
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 4.9e-43 178.7 138 65.2
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 6.4e-43 178.3 137 65.0
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 6.4e-43 178.3 137 66.4
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 8.4e-43 177.9 137 63.5
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 8.4e-43 177.9 137 66.4
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 8.4e-43 177.9 135 65.9
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.9e-42 176.8 137 63.5
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 1.9e-42 176.8 137 65.0
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.9e-42 176.8 142 61.3
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 1.9e-42 176.8 146 61.0
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 3.2e-42 176.0 142 63.4
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 3.2e-42 176.0 142 63.4
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 3.2e-42 176.0 142 63.4
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 5.4e-42 175.3 137 65.7
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 1.6e-41 173.7 137 61.3
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 2.1e-41 173.3 135 64.4
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 3.5e-41 172.6 137 61.3
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 4.6e-41 172.2 137 62.8
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 4.6e-41 172.2 137 62.8
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 6.0e-41 171.8 137 63.5
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 7.9e-41 171.4 137 62.8
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 1.3e-40 170.6 140 59.3
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 1.3e-40 170.6 137 62.0
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 1.3e-40 170.6 137 62.0
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 1.7e-40 170.2 142 60.6
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 1.7e-40 170.2 142 60.6
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 1.7e-40 170.2 142 60.6
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 2.3e-40 169.9 133 63.2
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 3.0e-40 169.5 133 62.4
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 3.9e-40 169.1 140 62.9
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 3.9e-40 169.1 149 59.7
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 5.1e-40 168.7 137 61.3
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 5.1e-40 168.7 140 62.9
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 6.6e-40 168.3 118 69.5
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 8.7e-40 167.9 137 60.6
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 8.7e-40 167.9 137 60.6
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 8.7e-40 167.9 118 66.9
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 1.1e-39 167.5 133 60.9
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.5e-39 167.2 137 60.6
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 1.5e-39 167.2 137 60.6
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 1.9e-39 166.8 137 60.6
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 1.9e-39 166.8 120 67.5
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 3.3e-39 166.0 138 60.9
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 3.3e-39 166.0 137 59.1
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 4.3e-39 165.6 137 59.1
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 4.3e-39 165.6 137 61.3
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 4.3e-39 165.6 137 60.6
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 4.3e-39 165.6 137 60.6
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 7.4e-39 164.9 138 60.1
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 9.6e-39 164.5 137 59.1
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 6.2e-38 161.8 138 58.7
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.4e-37 160.6 123 65.0
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 3.1e-37 159.5 168 52.4
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 6.4e-35 151.8 140 57.1
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 5.5e-34 148.7 105 69.5
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 9.3e-34 147.9 102 70.6
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 1.5e-28 130.6 158 47.5
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 5.5e-26 122.1 88 64.8
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 7.1e-26 121.7 90 67.8
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 1.6e-25 120.6 114 51.8
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 2.7e-25 119.8 136 46.3
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 6.0e-25 118.6 80 70.0
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 6.0e-25 118.6 80 70.0
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 2.3e-24 116.7 134 48.5
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 1.5e-23 114.0 80 72.5
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 3.3e-23 112.8 120 53.3
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 7.4e-23 111.7 80 67.5
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 8.2e-22 108.2 80 66.2
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.8e-21 107.1 122 49.2
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 5.3e-21 105.5 109 45.0
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 2.2e-19 100.1 103 53.4
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 7.4e-15 85.1 57 77.2
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 1.3e-14 84.3 61 68.9
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.8e-11 72.8 57 68.4
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 7.2e-10 68.6 57 63.2
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 1.6e-09 67.4 125 37.6
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 6.7e-08 62.0 46 60.9
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 4.4e-07 59.3 46 60.9


User provided reference genes

Program Settings