Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.2e-89 333.2 167 100.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.5e-65 253.1 125 100.0
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.1e-23 114.0 118 52.5
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 2.1e-22 109.8 121 49.6
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 2.1e-22 109.8 118 51.7
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 4.7e-22 108.6 118 47.5
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 8.0e-22 107.8 121 51.2
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 8.0e-22 107.8 120 49.2
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 1.4e-21 107.1 119 47.1
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.8e-21 106.7 122 46.7
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.3e-21 106.3 118 50.0
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 2.3e-21 106.3 119 49.6
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 2.3e-21 106.3 118 50.8
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 3.9e-21 105.5 122 46.7
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 5.2e-21 105.1 119 48.7
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 5.2e-21 105.1 118 46.6
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 5.2e-21 105.1 118 46.6
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 5.2e-21 105.1 118 48.3
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 5.2e-21 105.1 119 49.6
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 6.7e-21 104.8 118 50.8
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 6.7e-21 104.8 115 48.7
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 8.8e-21 104.4 119 47.9
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 8.8e-21 104.4 119 49.6
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 8.8e-21 104.4 118 50.0
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.1e-20 104.0 119 47.1
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.5e-20 103.6 121 48.8
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.5e-20 103.6 121 50.4
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 2.0e-20 103.2 118 49.2
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 2.0e-20 103.2 118 48.3
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 2.0e-20 103.2 119 51.3
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.0e-20 103.2 118 46.6
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.0e-20 103.2 121 48.8
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 2.0e-20 103.2 119 47.9
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 2.0e-20 103.2 118 50.0
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 2.0e-20 103.2 118 45.8
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 2.6e-20 102.8 118 51.7
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.6e-20 102.8 118 47.5
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.6e-20 102.8 119 45.4
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 2.6e-20 102.8 122 49.2
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.3e-20 102.4 122 47.5
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 3.3e-20 102.4 122 47.5
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.3e-20 102.4 122 47.5
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 3.3e-20 102.4 122 47.5
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 3.3e-20 102.4 122 47.5
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 3.3e-20 102.4 118 48.3
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 4.4e-20 102.1 118 50.0
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 4.4e-20 102.1 118 46.6
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 5.7e-20 101.7 119 47.9
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 5.7e-20 101.7 118 44.9
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 5.7e-20 101.7 124 46.0
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 7.4e-20 101.3 118 46.6
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 7.4e-20 101.3 121 47.9
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 9.7e-20 100.9 118 50.0
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.7e-20 100.9 121 47.9
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.7e-20 100.9 121 47.9
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 9.7e-20 100.9 118 44.1
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 9.7e-20 100.9 119 49.6
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 9.7e-20 100.9 122 46.7
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 9.7e-20 100.9 115 52.2
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 9.7e-20 100.9 115 52.2
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.3e-19 100.5 121 46.3
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.3e-19 100.5 118 50.0
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.3e-19 100.5 119 49.6
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.3e-19 100.5 118 48.3
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.7e-19 100.1 118 49.2
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.7e-19 100.1 119 49.6
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 2.2e-19 99.8 118 48.3
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 2.8e-19 99.4 122 47.5
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.8e-19 99.4 118 48.3
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 2.8e-19 99.4 116 44.0
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 3.7e-19 99.0 127 46.5
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 3.7e-19 99.0 121 46.3
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 6.3e-19 98.2 123 43.9
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 6.3e-19 98.2 119 47.9
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 6.3e-19 98.2 118 47.5
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 6.3e-19 98.2 118 46.6
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 8.2e-19 97.8 118 44.9
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.1e-18 97.4 53 79.2
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.4e-18 97.1 120 47.5
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.8e-18 96.7 118 48.3
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.8e-18 96.7 118 44.9
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.8e-18 96.7 118 44.9
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.8e-18 96.7 120 45.0
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.8e-18 96.7 119 47.1
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 4.1e-18 95.5 118 46.6
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 4.1e-18 95.5 126 44.4
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 7.0e-18 94.7 66 65.2
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 7.0e-18 94.7 48 85.4
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 7.0e-18 94.7 51 78.4
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 9.1e-18 94.4 118 44.9
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.2e-17 94.0 49 83.7
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.6e-17 93.6 118 43.2
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.6e-17 92.8 118 41.5
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.6e-17 92.8 125 47.2
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 3.5e-17 92.4 51 80.4
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 3.5e-17 92.4 121 41.3
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 4.5e-17 92.0 120 43.3
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 4.5e-17 92.0 51 76.5
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 4.5e-17 92.0 51 76.5
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.0e-16 90.9 50 82.0
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 2.2e-16 89.7 117 41.0
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.9e-16 89.4 115 42.6
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.0e-16 88.6 135 37.0
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 5.0e-16 88.6 118 43.2
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.4e-15 84.3 109 45.9
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 2.3e-13 79.7 54 63.0
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 2.3e-13 79.7 81 49.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 6.7e-13 78.2 48 68.8
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 4.4e-12 75.5 107 42.1
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 7.5e-12 74.7 38 86.8
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 6.3e-11 71.6 38 86.8
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.5e-07 60.5 42 59.5
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.1e-06 56.6 30 90.0
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 4.7e-06 55.5 26 88.5


User provided reference genes

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