Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 7.4e-161 570.5 285 100.0
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.0e-101 372.5 186 99.5
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 2.0e-36 157.1 177 52.5
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 2.2e-35 153.7 177 52.0
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 8.2e-35 151.8 118 59.3
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.1e-34 151.4 156 51.3
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.4e-34 150.2 173 50.3
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 3.1e-34 149.8 176 48.3
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 9.1e-34 148.3 85 78.8
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 1.5e-33 147.5 152 52.6
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.5e-33 147.5 159 53.5
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.5e-33 147.5 121 59.5
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.5e-33 147.5 169 50.3
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.5e-33 147.5 114 64.9
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.0e-33 147.1 176 48.9
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 2.6e-33 146.7 128 61.7
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 3.4e-33 146.4 110 64.5
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 3.4e-33 146.4 166 51.8
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.5e-33 146.0 114 62.3
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 4.5e-33 146.0 166 53.6
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 5.9e-33 145.6 176 48.3
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 5.9e-33 145.6 141 54.6
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 7.7e-33 145.2 124 59.7
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.0e-32 144.8 114 62.3
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.3e-32 144.4 172 48.3
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.7e-32 144.1 87 73.6
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.7e-32 144.1 167 48.5
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 2.2e-32 143.7 116 59.5
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 2.2e-32 143.7 180 46.7
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 2.2e-32 143.7 123 61.0
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 2.9e-32 143.3 168 51.8
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 2.9e-32 143.3 90 71.1
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 3.8e-32 142.9 164 51.2
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 3.8e-32 142.9 162 48.1
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 3.8e-32 142.9 119 59.7
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 3.8e-32 142.9 167 47.9
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 5.0e-32 142.5 84 77.4
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 5.0e-32 142.5 110 60.0
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 5.0e-32 142.5 211 43.1
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 5.0e-32 142.5 113 64.6
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 5.0e-32 142.5 121 62.0
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 6.5e-32 142.1 87 74.7
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 6.5e-32 142.1 98 67.3
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 8.5e-32 141.7 97 69.1
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 8.5e-32 141.7 116 62.1
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.1e-31 141.4 152 52.0
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.4e-31 141.0 159 52.2
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.9e-31 140.6 119 58.8
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 2.5e-31 140.2 122 56.6
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.5e-31 140.2 113 58.4
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 2.5e-31 140.2 89 71.9
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 2.5e-31 140.2 90 70.0
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 2.5e-31 140.2 78 78.2
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.5e-31 140.2 144 52.1
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 3.2e-31 139.8 110 63.6
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 5.5e-31 139.0 110 59.1
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 5.5e-31 139.0 110 59.1
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 5.5e-31 139.0 111 61.3
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 7.2e-31 138.7 115 57.4
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 7.2e-31 138.7 112 58.0
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 7.2e-31 138.7 148 48.6
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 9.4e-31 138.3 78 82.1
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 9.4e-31 138.3 113 61.9
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.2e-30 137.9 88 71.6
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.2e-30 137.9 78 82.1
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.2e-30 137.9 78 82.1
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.6e-30 137.5 113 56.6
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.6e-30 137.5 78 78.2
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.1e-30 137.1 108 61.1
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.1e-30 137.1 110 58.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 2.1e-30 137.1 98 64.3
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.7e-30 136.7 119 55.5
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.6e-30 136.3 111 64.0
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 4.7e-30 136.0 78 78.2
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 4.7e-30 136.0 78 74.4
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 6.1e-30 135.6 178 43.3
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 6.1e-30 135.6 183 45.9
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 1.0e-29 134.8 105 59.0
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 5.1e-29 132.5 78 75.6
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 1.5e-28 131.0 73 83.6
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 2.0e-28 130.6 142 50.7
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.3e-28 129.8 165 44.2
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.2e-27 127.1 78 71.8
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 2.8e-27 126.7 78 70.5
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.1e-26 124.8 133 48.1
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 4.1e-26 122.9 78 67.9
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 2.6e-25 120.2 76 67.1
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.5e-25 119.4 181 44.2
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.2e-24 117.1 133 45.9
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.1e-23 114.8 64 81.2
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.1e-23 114.8 61 83.6
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.6e-22 109.8 63 77.8
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 8.0e-22 108.6 80 57.5
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 6.7e-21 105.5 68 66.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.3e-20 103.2 99 55.6
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.3e-20 103.2 99 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 9.7e-20 101.7 77 58.4
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 3.7e-19 99.8 65 70.8
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 7.0e-18 95.5 78 52.6
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.7e-16 90.9 48 85.4
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 6.5e-16 89.0 75 49.3
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 8.5e-16 88.6 58 67.2
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 3.2e-15 86.7 102 37.3
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 1.5e-12 77.8 153 34.0
SEGI_12207 Sequoiadendron giganteum HOM05D003154 ORTHO05D003565 1.7e-08 64.3 120 39.2
SEGI_34996 Sequoiadendron giganteum HOM05D002415 ORTHO05D002522 1.1e-07 61.6 53 60.4
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 4.2e-07 59.7 86 36.0
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 2.1e-06 57.4 30 83.3


User provided reference genes

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