Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21943 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 4.7e-70 267.7 131 100.0
SEGI_14476 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 2.1e-33 146.0 121 60.3
SEGI_10792 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 5.1e-24 114.8 121 50.4
SEGI_27005 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 1.1e-18 97.1 124 42.7
ATR0706G120 Amborella trichopoda HOM05D003529 ORTHO05D004106 2.5e-18 95.9 131 39.7
Cc01_g21210 Coffea canephora HOM05D003529 ORTHO05D004106 6.3e-14 81.3 141 37.6
Nn3g21602 Nelumbo nucifera HOM05D003529 ORTHO05D004106 6.3e-14 81.3 122 40.2
Cc01_g04570 Coffea canephora HOM05D003529 ORTHO05D004106 4.5e-12 75.1 126 39.7
Manes.01G224100 Manihot esculenta HOM05D003529 ORTHO05D004106 1.3e-11 73.6 119 42.0
SGA_v2.0_scaffold334G49044 Striga asiatica HOM05D003529 ORTHO05D004106 1.7e-11 73.2 116 39.7
CSS0011800 Camellia sinensis var. sinensis HOM05D003529 ORTHO05D004106 3.8e-11 72.0 133 35.3
A07p26020 Brassica napus HOM05D003529 ORTHO05D004106 5.0e-11 71.6 108 47.2
BolC6t38003H Brassica oleracea HOM05D003529 ORTHO05D004106 5.0e-11 71.6 108 47.2
BraA07t30250Z Brassica rapa HOM05D003529 ORTHO05D004106 5.0e-11 71.6 108 47.2
Aqoxy5G00808 Aquilegia oxysepala HOM05D003529 ORTHO05D004106 6.5e-11 71.2 139 33.1
BcaB02g07332 Brassica carinata HOM05D003529 ORTHO05D004106 8.4e-11 70.9 98 46.9
Migut.D00112 Erythranthe guttata HOM05D003529 ORTHO05D004106 8.4e-11 70.9 122 41.0
RcHm_v2.0_Chr7g0242001 Rosa chinensis HOM05D003529 ORTHO05D004106 8.4e-11 70.9 137 34.3
Nn4g25678 Nelumbo nucifera HOM05D003529 ORTHO05D004106 1.1e-10 70.5 117 38.5
Nitab4.5_0001544g0150 Nicotiana tabacum HOM05D003529 ORTHO05D004106 1.1e-10 70.5 129 35.7
BcaC08g45209 Brassica carinata HOM05D003529 ORTHO05D004106 1.4e-10 70.1 108 47.2
Cfa005855 Carpinus fangiana HOM05D003529 ORTHO05D004106 1.4e-10 70.1 127 39.4
FAN08G2441 Fragaria x ananassa HOM05D003529 ORTHO05D004106 1.4e-10 70.1 116 39.7
Actinidia21017 Actinidia chinensis HOM05D001306 ORTHO05D001159 1.9e-10 69.7 139 35.3
Oeu011480.1 Olea europaea HOM05D003529 ORTHO05D004106 1.9e-10 69.7 127 38.6
Dinv10056 Davidia involucrata HOM05D003529 ORTHO05D004106 2.5e-10 69.3 128 36.7
ClCG10G011190 Citrullus lanatus HOM05D003529 ORTHO05D004106 3.2e-10 68.9 122 35.2
Sp5g00860 Schrenkiella parvula HOM05D003529 ORTHO05D004106 4.2e-10 68.6 108 46.3
C06p28320 Brassica napus HOM05D003529 ORTHO05D004106 5.5e-10 68.2 106 44.3
Eucgr.H01074 Eucalyptus grandis HOM05D003529 ORTHO05D004106 5.5e-10 68.2 141 35.5
Lj2P1201T47 Lonicera japonica HOM05D003529 ORTHO05D004106 5.5e-10 68.2 118 39.0
CDE05G0935 Ceratophyllum demersum HOM05D000488 ORTHO05D000347 7.2e-10 67.8 124 32.3
PGSC0003DMG400007290 Solanum tuberosum HOM05D003529 ORTHO05D004106 7.2e-10 67.8 113 40.7
CsaV3_4G001080 Cucumis sativus L. HOM05D003529 ORTHO05D004106 9.3e-10 67.4 129 32.6
MELO3C017929.2 Cucumis melo HOM05D003529 ORTHO05D004106 1.2e-09 67.0 122 34.4
Nitab4.5_0005587g0040 Nicotiana tabacum HOM05D003529 ORTHO05D004106 1.2e-09 67.0 122 36.9
Oeu006461.1 Olea europaea HOM05D003529 ORTHO05D004106 1.2e-09 67.0 129 34.9
Atru.chr5.1067 Acer truncatum HOM05D003529 ORTHO05D004106 2.1e-09 66.2 128 35.2
BcaC07g40776 Brassica carinata HOM05D003529 ORTHO05D004106 2.1e-09 66.2 108 45.4
Peaxi162Scf00147g00094 Petunia axillaris HOM05D003529 ORTHO05D004106 2.1e-09 66.2 124 37.1
TAR633G2691 Trochodendron aralioides HOM05D003529 ORTHO05D004106 2.1e-09 66.2 120 35.0
PGSC0003DMG400031841 Solanum tuberosum HOM05D003529 ORTHO05D004106 2.7e-09 65.9 124 39.5
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.7e-09 65.9 124 31.5
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.7e-09 65.9 127 31.5
AT3G62650 Arabidopsis thaliana HOM05D003529 ORTHO05D004106 3.5e-09 65.5 108 42.6
BcaC07g40741 Brassica carinata HOM05D003529 ORTHO05D004106 3.5e-09 65.5 108 44.4
BolC8t51321H Brassica oleracea HOM05D003529 ORTHO05D004106 3.5e-09 65.5 108 44.4
DCAR_005779 Daucus carota HOM05D003529 ORTHO05D004106 3.5e-09 65.5 137 32.8
ECA236G3228 Erigeron canadensis HOM05D003529 ORTHO05D004106 4.6e-09 65.1 118 39.0
Thhalv10006300m.g Eutrema salsugineum HOM05D003529 ORTHO05D004106 4.6e-09 65.1 108 44.4
Rhsim13G0007500 Rhododendron simsii HOM05D003529 ORTHO05D004106 4.6e-09 65.1 124 33.1
Solyc09g075570.1 Solanum lycopersicum HOM05D003529 ORTHO05D004106 4.6e-09 65.1 124 38.7
SGA_v2.0_scaffold376G50256 Striga asiatica HOM05D003529 ORTHO05D004106 4.6e-09 65.1 115 38.3
A09p54520 Brassica napus HOM05D003529 ORTHO05D004106 6.1e-09 64.7 108 44.4
C08p37400 Brassica napus HOM05D003529 ORTHO05D004106 6.1e-09 64.7 108 44.4
BraA09t40864Z Brassica rapa HOM05D003529 ORTHO05D004106 6.1e-09 64.7 108 44.4
COL.COLO4_23282 Corchorus olitorius HOM05D003529 ORTHO05D004106 6.1e-09 64.7 114 36.0
Dinv33090 Davidia involucrata HOM05D003529 ORTHO05D004106 6.1e-09 64.7 133 36.1
Hma1.2p1_0494F.1_g165600 Hydrangea macrophylla HOM05D003529 ORTHO05D004106 6.1e-09 64.7 129 36.4
Sc17g0003040 Simmondsia chinensis HOM05D003529 ORTHO05D004106 7.9e-09 64.3 128 33.6
Sopen09g030370 Solanum pennellii HOM05D003529 ORTHO05D004106 7.9e-09 64.3 124 38.7
MBI18_g45029_MAGBIO Magnolia biondii HOM05D003529 ORTHO05D004106 1.0e-08 63.9 121 31.4
Nitab4.5_0000116g0160 Nicotiana tabacum HOM05D003529 ORTHO05D004106 1.0e-08 63.9 125 37.6
CiPaw.08G092200 Carya illinoinensis HOM05D003529 ORTHO05D004106 1.3e-08 63.5 124 36.3
Gorai.007G125400 Gossypium raimondii HOM05D003529 ORTHO05D004106 1.3e-08 63.5 123 35.8
Hma1.2p1_0212F.1_g090160 Hydrangea macrophylla HOM05D003529 ORTHO05D004106 1.3e-08 63.5 114 36.0
Sabra02G0158400 Salix brachista HOM05D003529 ORTHO05D004106 1.3e-08 63.5 123 38.2
AL5G45400 Arabidopsis lyrata HOM05D003529 ORTHO05D004106 1.8e-08 63.2 108 41.7
Lj1C21T4 Lonicera japonica HOM05D003529 ORTHO05D004106 1.8e-08 63.2 111 39.6
Prupe.8G268600 Prunus persica HOM05D003529 ORTHO05D004106 1.8e-08 63.2 136 33.8
Solyc06g009770.1 Solanum lycopersicum HOM05D003529 ORTHO05D004106 1.8e-08 63.2 136 36.0
FAN04G1108 Fragaria x ananassa HOM05D003529 ORTHO05D004106 2.3e-08 62.8 115 40.0
Oeu008332.1 Olea europaea HOM05D003529 ORTHO05D004106 2.3e-08 62.8 119 35.3
Aa31LG10G16460 Aethionema arabicum HOM05D003529 ORTHO05D004106 3.0e-08 62.4 112 38.4
Gohir.A11G112000 Gossypium hirsutum HOM05D003529 ORTHO05D004106 3.0e-08 62.4 123 35.0
Gohir.D11G117100 Gossypium hirsutum HOM05D003529 ORTHO05D004106 3.0e-08 62.4 123 35.0
TAR636G2223 Trochodendron aralioides HOM05D003529 ORTHO05D004106 3.0e-08 62.4 126 31.7
Lsat_1_v5_gn_8_165720 Lactuca sativa HOM05D003529 ORTHO05D004106 3.9e-08 62.0 128 38.3
unitig_578.g16622 Utricularia gibba HOM05D003529 ORTHO05D004106 3.9e-08 62.0 111 36.9
Actinidia25830 Actinidia chinensis HOM05D001306 ORTHO05D001159 5.1e-08 61.6 120 31.7
FvH4_5g28940 Fragaria vesca HOM05D003529 ORTHO05D004106 6.7e-08 61.2 116 37.1
ClCG09G005350 Citrullus lanatus HOM05D003529 ORTHO05D004106 8.7e-08 60.8 129 34.1
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 8.7e-08 60.8 115 34.8
Peaxi162Scf00001g00294 Petunia axillaris HOM05D003529 ORTHO05D004106 1.1e-07 60.5 126 34.9
PGR119G1167 Punica granatum HOM05D003529 ORTHO05D004106 1.1e-07 60.5 126 36.5
THA.LOC104817473 Tarenaya hassleriana HOM05D003529 ORTHO05D004106 1.1e-07 60.5 124 37.9
CARHR172920 Cardamine hirsuta HOM05D003529 ORTHO05D004106 1.5e-07 60.1 111 38.7
Nitab4.5_0002454g0010 Nicotiana tabacum HOM05D003529 ORTHO05D004106 1.5e-07 60.1 128 35.9
Sopen06g004400 Solanum pennellii HOM05D003529 ORTHO05D004106 1.5e-07 60.1 123 35.8
Thecc.01G308200 Theobroma cacao HOM05D003529 ORTHO05D004106 1.5e-07 60.1 122 33.6
CANSAT25G0832 Cannabis sativa HOM05D003529 ORTHO05D004106 1.9e-07 59.7 121 33.1
Lj5g0005836 Lotus japonicus HOM05D003529 ORTHO05D004106 1.9e-07 59.7 131 33.6
THA.LOC104802191 Tarenaya hassleriana HOM05D003529 ORTHO05D004106 1.9e-07 59.7 120 39.2
BcaB02g08109 Brassica carinata HOM05D003529 ORTHO05D004106 2.5e-07 59.3 100 42.0
Cpa.g.sc151.47 Carica papaya HOM05D003529 ORTHO05D004106 2.5e-07 59.3 118 36.4
Sp4g29420 Schrenkiella parvula HOM05D003529 ORTHO05D004106 2.5e-07 59.3 118 38.1
Lj1g0023980 Lotus japonicus HOM05D003529 ORTHO05D004106 3.3e-07 58.9 124 33.9
MD03G1298600 Malus domestica HOM05D003529 ORTHO05D004106 3.3e-07 58.9 124 34.7
Sed0002432 Sechium edule HOM05D003529 ORTHO05D004106 3.3e-07 58.9 131 33.6
MELO3C015948.2 Cucumis melo HOM05D003529 ORTHO05D004106 4.3e-07 58.5 126 34.1
CsaV3_7G029720 Cucumis sativus L. HOM05D003529 ORTHO05D004106 4.3e-07 58.5 126 34.1
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 4.3e-07 58.5 113 31.9
PSO541G3234 Papaver somniferum HOM05D003529 ORTHO05D004106 4.3e-07 58.5 152 32.2
CSS0040208 Camellia sinensis var. sinensis HOM05D003529 ORTHO05D004106 5.7e-07 58.2 111 32.4
CAN.G668.31 Capsicum annuum HOM05D003529 ORTHO05D004106 7.4e-07 57.8 117 35.0
Haze_04995 Corylus avellana HOM05D003529 ORTHO05D004106 7.4e-07 57.8 126 35.7
Haze_04994 Corylus avellana HOM05D003529 ORTHO05D004106 9.7e-07 57.4 126 34.9
Lalb_Chr21g0309411 Lupinus albus HOM05D003529 ORTHO05D004106 9.7e-07 57.4 124 31.5
Sed0005967 Sechium edule HOM05D003529 ORTHO05D004106 9.7e-07 57.4 120 33.3
SEGI_07270 Sequoiadendron giganteum HOM05D026807 ORTHO05D004417 9.7e-07 57.4 119 34.5
HPP92_006902 Vanilla planifolia HOM05D003529 ORTHO05D004106 9.7e-07 57.4 108 35.2
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.3e-06 57.0 98 34.7
TAR365G1145 Trochodendron aralioides HOM05D003529 ORTHO05D004106 1.3e-06 57.0 130 29.2
AT2G47485 Arabidopsis thaliana HOM05D003529 ORTHO05D004106 1.6e-06 56.6 112 41.1
Carub.0004s3022 Capsella rubella HOM05D003529 ORTHO05D004106 1.6e-06 56.6 122 39.3
CARHR142880 Cardamine hirsuta HOM05D003529 ORTHO05D004106 1.6e-06 56.6 112 41.1
CiPaw.07G113900 Carya illinoinensis HOM05D003529 ORTHO05D004106 2.2e-06 56.2 127 33.1
SEGI_18478 Sequoiadendron giganteum HOM05D026807 ORTHO05D004417 2.2e-06 56.2 117 35.9
Thhalv10001673m.g Eutrema salsugineum HOM05D003529 ORTHO05D004106 2.8e-06 55.8 114 36.0
PSO675G3938 Papaver somniferum HOM05D003529 ORTHO05D004106 2.8e-06 55.8 149 32.2
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 2.8e-06 55.8 130 33.8
Sed0025326 Sechium edule HOM05D003529 ORTHO05D004106 2.8e-06 55.8 115 31.3
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 3.7e-06 55.5 120 32.5
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.8e-06 55.1 83 36.1
Rhsim01G0288700 Rhododendron simsii HOM05D003529 ORTHO05D004106 4.8e-06 55.1 137 35.0
AL4G47050 Arabidopsis lyrata HOM05D003529 ORTHO05D004106 6.3e-06 54.7 112 41.1
BolC4t21684H Brassica oleracea HOM05D003529 ORTHO05D004106 8.2e-06 54.3 119 37.0
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 8.2e-06 54.3 120 32.5


User provided reference genes

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