Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 8.5e-59 230.3 134 100.0
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.6e-09 66.6 37 81.1
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 2.8e-09 65.9 91 40.7
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.6e-09 65.5 87 46.0
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.6e-09 65.5 87 46.0
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 6.2e-09 64.7 91 41.8
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.2e-09 64.7 39 74.4
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 8.1e-09 64.3 92 42.4
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.1e-08 63.9 40 70.0
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 1.1e-08 63.9 40 70.0
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.1e-08 63.9 40 70.0
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.1e-08 63.9 40 70.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.1e-08 63.9 40 70.0
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.1e-08 63.9 87 44.8
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.4e-08 63.5 40 70.0
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 1.8e-08 63.2 94 40.4
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 2.4e-08 62.8 86 40.7
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 2.4e-08 62.8 93 40.9
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 3.1e-08 62.4 40 67.5
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 3.1e-08 62.4 39 71.8
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 3.1e-08 62.4 91 42.9
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 3.1e-08 62.4 87 42.5
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 3.1e-08 62.4 39 71.8
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 4.0e-08 62.0 37 75.7
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 5.2e-08 61.6 39 71.8
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 5.2e-08 61.6 39 71.8
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 6.8e-08 61.2 40 65.0
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 8.9e-08 60.8 91 42.9
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 8.9e-08 60.8 99 38.4
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 8.9e-08 60.8 40 67.5
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.2e-07 60.5 39 71.8
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.2e-07 60.5 92 42.4
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.2e-07 60.5 39 71.8
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 1.2e-07 60.5 92 39.1
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 1.5e-07 60.1 82 43.9
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.5e-07 60.1 83 37.3
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.5e-07 60.1 91 38.5
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 1.5e-07 60.1 89 38.2
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 2.0e-07 59.7 94 42.6
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 2.0e-07 59.7 39 71.8
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 2.6e-07 59.3 39 69.2
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 3.4e-07 58.9 86 36.0
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 4.4e-07 58.5 86 43.0
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 4.4e-07 58.5 90 42.2
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 5.8e-07 58.2 93 38.7
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.6e-07 57.8 91 37.4
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 7.6e-07 57.8 85 44.7
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 9.9e-07 57.4 89 37.1
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 9.9e-07 57.4 95 36.8
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-06 57.0 91 37.4
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-06 57.0 91 36.3
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.7e-06 56.6 91 40.7
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.2e-06 56.2 91 36.3
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.2e-06 56.2 95 35.8
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 2.2e-06 56.2 95 37.9
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 2.2e-06 56.2 39 61.5
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 2.9e-06 55.8 39 64.1
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 2.9e-06 55.8 90 40.0
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 2.9e-06 55.8 103 33.0
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-06 55.8 91 36.3
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-06 55.8 91 36.3
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 3.8e-06 55.5 37 64.9
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.8e-06 55.5 39 64.1
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 4.9e-06 55.1 39 66.7
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 4.9e-06 55.1 95 34.7
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 4.9e-06 55.1 96 38.5
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 6.4e-06 54.7 39 64.1
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 6.4e-06 54.7 87 33.3
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 8.4e-06 54.3 37 67.6


User provided reference genes

Program Settings