Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.4e-259 898.3 439 100.0
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 9.9e-197 690.3 467 75.8
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 3.5e-162 575.5 453 64.0
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 1.1e-160 570.5 438 63.0
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 1.3e-159 567.0 429 64.8
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 2.8e-159 565.8 423 65.2
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.1e-158 563.9 439 63.8
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 3.1e-158 562.4 443 64.3
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 9.0e-158 560.8 437 64.8
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 1.2e-157 560.5 433 64.2
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 2.0e-157 559.7 452 62.2
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 2.6e-157 559.3 440 64.5
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 3.4e-157 558.9 450 63.1
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 5.8e-157 558.1 439 62.0
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 5.8e-157 558.1 424 65.6
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 7.6e-157 557.8 443 64.1
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 7.6e-157 557.8 439 62.9
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 1.3e-156 557.0 422 64.9
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 2.9e-156 555.8 452 63.1
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 2.5e-155 552.7 429 64.6
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 5.5e-155 551.6 424 62.7
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 7.1e-155 551.2 423 65.2
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 9.3e-155 550.8 424 63.0
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 9.3e-155 550.8 438 63.5
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 1.2e-154 550.4 433 62.8
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 1.6e-154 550.1 450 61.8
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 1.6e-154 550.1 434 63.8
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 1.6e-154 550.1 424 65.3
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 2.7e-154 549.3 424 62.7
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 3.5e-154 548.9 429 63.2
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 3.5e-154 548.9 423 64.1
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 4.6e-154 548.5 432 61.8
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.0e-153 547.4 429 62.9
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 1.0e-153 547.4 429 62.9
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 1.3e-153 547.0 423 65.0
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 1.8e-153 546.6 423 62.6
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.8e-153 546.6 429 62.9
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 2.3e-153 546.2 423 63.4
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 3.0e-153 545.8 429 62.9
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 3.9e-153 545.4 423 63.6
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 5.1e-153 545.0 423 63.6
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 6.7e-153 544.7 423 64.3
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 8.7e-153 544.3 440 61.6
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 8.7e-153 544.3 429 62.7
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 1.5e-152 543.5 433 61.9
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 1.9e-152 543.1 427 62.3
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 4.3e-152 542.0 445 60.4
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 4.3e-152 542.0 423 62.6
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 4.3e-152 542.0 423 64.3
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 9.7e-152 540.8 429 61.5
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 9.7e-152 540.8 430 62.3
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.6e-151 540.0 434 61.8
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 3.7e-151 538.9 423 61.9
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 3.7e-151 538.9 424 63.0
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 4.8e-151 538.5 444 61.5
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 8.2e-151 537.7 457 59.7
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 1.1e-150 537.3 423 62.9
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 1.1e-150 537.3 423 63.6
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 1.1e-150 537.3 453 60.5
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 1.1e-150 537.3 424 61.6
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 4.1e-150 535.4 439 61.5
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 5.3e-150 535.0 429 61.5
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 1.2e-149 533.9 437 62.2
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 1.2e-149 533.9 431 61.9
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 1.5e-149 533.5 431 61.9
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 1.5e-149 533.5 422 62.1
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 2.0e-149 533.1 425 61.9
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 2.6e-149 532.7 429 62.2
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 3.4e-149 532.3 430 62.8
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 3.4e-149 532.3 423 62.9
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 4.5e-149 531.9 415 63.4
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 4.5e-149 531.9 423 62.2
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 5.9e-149 531.6 413 63.7
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 5.9e-149 531.6 423 61.7
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 5.9e-149 531.6 426 62.2
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 5.9e-149 531.6 439 61.0
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 7.7e-149 531.2 431 62.2
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 1.0e-148 530.8 430 60.9
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 1.3e-148 530.4 427 62.1
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 1.3e-148 530.4 431 61.0
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 3.8e-148 528.9 441 59.0
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.9e-147 526.6 430 61.9
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.9e-147 526.6 430 61.9
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 1.9e-147 526.6 430 61.4
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 2.5e-147 526.2 426 61.7
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 3.2e-147 525.8 430 60.9
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 3.2e-147 525.8 431 60.6
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 4.2e-147 525.4 429 61.3
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 5.5e-147 525.0 430 61.6
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 7.2e-147 524.6 423 62.4
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 9.4e-147 524.2 433 60.5
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 9.4e-147 524.2 430 60.5
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 1.2e-146 523.9 424 61.3
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 1.6e-146 523.5 423 62.2
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 2.1e-146 523.1 430 60.7
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.7e-146 522.7 430 61.4
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.7e-146 522.7 430 61.4
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 3.6e-146 522.3 430 60.0
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 1.0e-145 520.8 423 60.8
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 1.0e-145 520.8 430 61.4
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 1.0e-145 520.8 430 60.7
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 5.1e-145 518.5 423 61.0
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 6.7e-145 518.1 441 59.4
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 6.7e-145 518.1 423 60.8
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 8.8e-145 517.7 430 61.6
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 8.8e-145 517.7 423 60.3
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 1.5e-144 516.9 423 59.8
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 3.3e-144 515.8 430 59.1
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 4.3e-144 515.4 434 59.9
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 4.3e-144 515.4 440 57.7
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 7.4e-144 514.6 424 59.9
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 1.3e-143 513.8 433 59.8
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 2.2e-143 513.1 436 58.7
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 6.3e-143 511.5 434 59.2
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.1e-142 510.8 421 59.6
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.1e-142 510.8 421 59.6
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 2.4e-142 509.6 421 59.6
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 2.4e-142 509.6 444 59.5
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 3.1e-142 509.2 423 59.1
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 3.1e-142 509.2 435 59.1
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 3.1e-142 509.2 419 59.4
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 7.7e-141 504.6 408 63.5
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 1.0e-140 504.2 433 57.0
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 1.0e-140 504.2 433 57.0
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 1.7e-140 503.4 433 57.0
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 2.2e-140 503.1 433 57.0
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 2.9e-140 502.7 408 63.2
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 1.4e-139 500.4 408 60.8
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 2.5e-139 499.6 402 63.4
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 2.1e-138 496.5 423 58.9
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 4.7e-138 495.4 415 61.7
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 1.0e-137 494.2 423 58.6
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 1.8e-137 493.4 426 59.4
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 8.8e-137 491.1 451 56.1
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.5e-136 490.3 390 62.3
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.3e-135 487.3 431 59.2
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 2.8e-135 486.1 372 65.6
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 2.0e-133 479.9 427 57.4
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 1.1e-131 474.2 385 61.6
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.6e-130 470.3 442 56.6
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 1.0e-129 467.6 369 63.7
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 9.7e-128 461.1 272 83.8
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.7e-127 460.3 366 62.3
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 1.2e-125 454.1 369 62.3
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 1.6e-122 443.7 404 57.9
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 6.1e-122 441.8 428 54.7
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 5.7e-120 435.3 365 59.5
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 7.7e-117 424.9 362 59.9
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 8.5e-116 421.4 423 51.8
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 2.0e-109 400.2 444 51.1
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 2.8e-98 363.2 431 48.5
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 6.0e-93 345.5 307 58.6
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 1.7e-92 344.0 262 60.7
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 1.9e-91 340.5 428 46.0
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 1.3e-84 317.8 426 43.2
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 7.1e-78 295.4 379 45.1
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 4.6e-69 266.2 230 60.0
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 1.7e-68 264.2 423 38.1
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 8.1e-66 255.4 231 55.4
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.1e-59 235.0 271 49.4
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 2.5e-51 207.2 135 74.8
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.6e-48 197.2 107 87.9
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 1.6e-45 188.0 147 61.2
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 3.5e-37 160.2 126 61.9
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.5e-35 154.8 100 72.0
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 1.3e-34 151.8 400 29.0
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 6.7e-28 129.4 72 84.7
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 3.7e-18 97.1 78 60.3
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 2.4e-17 94.4 131 43.5
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 2.6e-11 74.3 68 47.1
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 2.4e-09 67.8 55 58.2
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 1.1e-06 58.9 47 63.8
Eucgr.K03155 Eucalyptus grandis HOM05D001886 ORTHO05D005666 1.9e-06 58.2 162 26.5
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 2.5e-06 57.8 47 61.7


User provided reference genes

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