Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21712 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 1.3e-111 406.4 207 100.0
SEGI_19312 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 1.3e-13 80.9 132 38.6
Sopen02g013590 Solanum pennellii HOM05D003144 ORTHO05D003539 9.2e-12 74.7 95 42.1
SEGI_25520 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 1.6e-11 73.9 66 53.0
SMO367G0089 Selaginella moellendorffii HOM05D003144 ORTHO05D003539 3.5e-11 72.8 72 50.0
Peaxi162Scf00366g00819 Petunia axillaris HOM05D003144 ORTHO05D003539 4.6e-11 72.4 71 50.7
CAN.G53.4 Capsicum annuum HOM05D003144 ORTHO05D003539 7.8e-11 71.6 66 51.5
Mapoly0008s0040 Marchantia polymorpha HOM05D003144 ORTHO05D003539 7.8e-11 71.6 118 35.6
Nitab4.5_0000136g0260 Nicotiana tabacum HOM05D003144 ORTHO05D003539 1.7e-10 70.5 70 50.0
PGSC0003DMG400015511 Solanum tuberosum HOM05D003144 ORTHO05D003539 1.7e-10 70.5 66 53.0
SGA_v2.0_scaffold10G05189 Striga asiatica HOM05D000001 ORTHO05D022897 1.7e-10 70.5 66 53.0
COL.COLO4_22036 Corchorus olitorius HOM05D003144 ORTHO05D003539 2.3e-10 70.1 94 42.6
CAN.G53.3 Capsicum annuum HOM05D003144 ORTHO05D003539 3.0e-10 69.7 66 53.0
PSO541G0707 Papaver somniferum HOM05D003144 ORTHO05D003539 3.0e-10 69.7 117 36.8
PSO675G6275 Papaver somniferum HOM05D003144 ORTHO05D003539 3.0e-10 69.7 117 35.0
CiPaw.01G045600 Carya illinoinensis HOM05D003144 ORTHO05D003539 5.1e-10 68.9 70 52.9
Nitab4.5_0008397g0010 Nicotiana tabacum HOM05D003144 ORTHO05D003539 5.1e-10 68.9 70 48.6
Sabra07G0018700 Salix brachista HOM05D003144 ORTHO05D003539 5.1e-10 68.9 83 49.4
CDE11G1071 Ceratophyllum demersum HOM05D003144 ORTHO05D003539 6.6e-10 68.6 71 46.5
Hund13998 Selenicereus undatus HOM05D003144 ORTHO05D003539 6.6e-10 68.6 70 51.4
Actinidia35629 Actinidia chinensis HOM05D003144 ORTHO05D003539 8.7e-10 68.2 96 38.5
CiPaw.01G044800 Carya illinoinensis HOM05D003144 ORTHO05D003539 8.7e-10 68.2 70 52.9
CiPaw.01G045400 Carya illinoinensis HOM05D003144 ORTHO05D003539 8.7e-10 68.2 70 52.9
Lj2C456G10 Lonicera japonica HOM05D003144 ORTHO05D003539 8.7e-10 68.2 70 48.6
Solyc02g062580.3 Solanum lycopersicum HOM05D003144 ORTHO05D003539 8.7e-10 68.2 66 51.5
Sopen02g013600 Solanum pennellii HOM05D003144 ORTHO05D003539 8.7e-10 68.2 66 51.5
SGA_v2.0_scaffold12G06312 Striga asiatica HOM05D003144 ORTHO05D003539 8.7e-10 68.2 66 50.0
Ciclev10026261m.g Citrus clementina HOM05D003144 ORTHO05D003539 1.5e-09 67.4 105 37.1
Dinv13496 Davidia involucrata HOM05D003144 ORTHO05D003539 1.5e-09 67.4 66 53.0
Duzib264G0171 Durio zibethinus HOM05D003144 ORTHO05D003539 1.5e-09 67.4 70 50.0
Peaxi162Scf00008g03417 Petunia axillaris HOM05D003144 ORTHO05D003539 1.9e-09 67.0 167 29.9
arahy.Tifrunner.gnm1.ann1.005S9P Arachis hypogaea HOM05D003144 ORTHO05D003539 3.3e-09 66.2 70 45.7
Gohir.D12G063300 Gossypium hirsutum HOM05D003144 ORTHO05D003539 3.3e-09 66.2 70 48.6
Gorai.008G066600 Gossypium raimondii HOM05D003144 ORTHO05D003539 3.3e-09 66.2 70 48.6
Thecc.01G030700 Theobroma cacao HOM05D003144 ORTHO05D003539 3.3e-09 66.2 77 44.2
ATR0568G217 Amborella trichopoda HOM05D003144 ORTHO05D003539 4.3e-09 65.9 70 45.7
Cfa004341 Carpinus fangiana HOM05D003144 ORTHO05D003539 4.3e-09 65.9 70 50.0
Haze_15060 Corylus avellana HOM05D003144 ORTHO05D003539 4.3e-09 65.9 70 50.0
PSO675G8035 Papaver somniferum HOM05D003144 ORTHO05D003539 4.3e-09 65.9 117 35.0
Lj4g0005388 Lotus japonicus HOM05D003144 ORTHO05D003539 5.6e-09 65.5 71 52.1
PGR102G0163 Punica granatum HOM05D003144 ORTHO05D003539 5.6e-09 65.5 93 39.8
Carub.0005s1731 Capsella rubella HOM05D003144 ORTHO05D003539 7.3e-09 65.1 95 42.1
CiPaw.01G045100 Carya illinoinensis HOM05D003144 ORTHO05D003539 7.3e-09 65.1 70 51.4
Sabra05G0099200 Salix brachista HOM05D003144 ORTHO05D003539 7.3e-09 65.1 75 45.3
TWI09G1569 Tripterygium wilfordii HOM05D003144 ORTHO05D003539 7.3e-09 65.1 72 54.2
HPP92_013478 Vanilla planifolia HOM05D003144 ORTHO05D003539 7.3e-09 65.1 70 44.3
GSVIVG01018921001 Vitis vinifera HOM05D003144 ORTHO05D003539 7.3e-09 65.1 70 50.0
AL8G45090 Arabidopsis lyrata HOM05D003144 ORTHO05D003539 9.6e-09 64.7 124 34.7
Cpa.g.c32372 Carica papaya HOM05D003144 ORTHO05D003539 9.6e-09 64.7 71 46.5
Glyma.01G171800 Glycine max HOM05D003144 ORTHO05D003539 9.6e-09 64.7 70 48.6
Glyma.11G071400 Glycine max HOM05D003144 ORTHO05D003539 9.6e-09 64.7 70 48.6
Rhsim08G0119800 Rhododendron simsii HOM05D003144 ORTHO05D003539 9.6e-09 64.7 70 48.6
Ah.03g141130 Amaranthus hybridus HOM05D003144 ORTHO05D003539 1.2e-08 64.3 74 45.9
CSS0016259 Camellia sinensis var. sinensis HOM05D003144 ORTHO05D003539 1.2e-08 64.3 66 48.5
Os02g0704500 Oryza sativa ssp. japonica HOM05D003144 ORTHO05D003539 1.2e-08 64.3 97 39.2
Thecc.01G031300 Theobroma cacao HOM05D003144 ORTHO05D003539 1.2e-08 64.3 110 38.2
AL5G31280 Arabidopsis lyrata HOM05D003144 ORTHO05D003539 1.6e-08 63.9 107 38.3
AT3G50920 Arabidopsis thaliana HOM05D003144 ORTHO05D003539 1.6e-08 63.9 114 36.8
MSTRG.2483 Avicennia marina HOM05D003144 ORTHO05D003539 1.6e-08 63.9 115 34.8
Lj4A205T21 Lonicera japonica HOM05D003144 ORTHO05D003539 1.6e-08 63.9 72 45.8
MD02G1143500 Malus domestica HOM05D003144 ORTHO05D003539 1.6e-08 63.9 70 47.1
QL06p047123 Quercus lobata HOM05D003144 ORTHO05D003539 1.6e-08 63.9 70 48.6
Sed0003710 Sechium edule HOM05D003144 ORTHO05D003539 1.6e-08 63.9 71 43.7
TWI09G0554 Tripterygium wilfordii HOM05D003144 ORTHO05D003539 1.6e-08 63.9 117 35.9
vmacro19036 Vaccinium macrocarpon HOM05D003144 ORTHO05D003539 1.6e-08 63.9 109 35.8
MD15G1256700 Malus domestica HOM05D003144 ORTHO05D003539 2.1e-08 63.5 70 45.7
Medtr8g077115 Medicago truncatula HOM05D003144 ORTHO05D003539 2.1e-08 63.5 95 34.7
Oeu027432.1 Olea europaea HOM05D003144 ORTHO05D003539 2.1e-08 63.5 118 40.7
Actinidia19199 Actinidia chinensis HOM05D003144 ORTHO05D003539 2.8e-08 63.2 118 32.2
Aqoxy4G01844 Aquilegia oxysepala HOM05D003144 ORTHO05D003539 2.8e-08 63.2 125 32.0
Psat4g094960 Pisum sativum HOM05D003144 ORTHO05D003539 2.8e-08 63.2 95 35.8
Sc03g0003130 Simmondsia chinensis HOM05D003144 ORTHO05D003539 2.8e-08 63.2 95 40.0
TPR.G24094 Trifolium pratense HOM05D003144 ORTHO05D003539 2.8e-08 63.2 95 37.9
arahy.Tifrunner.gnm1.ann1.IPKV79 Arachis hypogaea HOM05D003144 ORTHO05D003539 3.6e-08 62.8 70 44.3
CARHR160490 Cardamine hirsuta HOM05D003144 ORTHO05D003539 3.6e-08 62.8 96 41.7
Thhalv10010693m.g Eutrema salsugineum HOM05D003144 ORTHO05D003539 3.6e-08 62.8 97 38.1
Prupe.7G158200 Prunus persica HOM05D003144 ORTHO05D003539 3.6e-08 62.8 70 44.3
PGSC0003DMG402003606 Solanum tuberosum HOM05D003144 ORTHO05D003539 3.6e-08 62.8 71 45.1
Aqoxy6G01164 Aquilegia oxysepala HOM05D003144 ORTHO05D003539 4.7e-08 62.4 96 36.5
AT5G66450 Arabidopsis thaliana HOM05D003144 ORTHO05D003539 4.7e-08 62.4 103 36.9
A07p17510 Brassica napus HOM05D003144 ORTHO05D003539 4.7e-08 62.4 98 39.8
CAN.G358.47 Capsicum annuum HOM05D003144 ORTHO05D003539 4.7e-08 62.4 66 48.5
Gohir.A12G063500 Gossypium hirsutum HOM05D003144 ORTHO05D003539 4.7e-08 62.4 70 47.1
Zm00001eb188310 Zea mays HOM05D003144 ORTHO05D003539 4.7e-08 62.4 100 36.0
EL10As8g23913 Beta vulgaris HOM05D003144 ORTHO05D003539 6.2e-08 62.0 147 31.3
Sp5g11310 Schrenkiella parvula HOM05D003144 ORTHO05D003539 6.2e-08 62.0 97 38.1
Aa31LG4G19020 Aethionema arabicum HOM05D003144 ORTHO05D003539 8.1e-08 61.6 136 30.1
arahy.Tifrunner.gnm1.ann1.U5PEZY Arachis hypogaea HOM05D003144 ORTHO05D003539 8.1e-08 61.6 94 37.2
C02p64930 Brassica napus HOM05D003144 ORTHO05D003539 8.1e-08 61.6 69 50.7
Thhalv10004725m.g Eutrema salsugineum HOM05D003144 ORTHO05D003539 8.1e-08 61.6 95 44.2
VMungo1215G0425 Vigna mungo HOM05D003144 ORTHO05D003539 8.1e-08 61.6 70 45.7
Aa31LG1G14970 Aethionema arabicum HOM05D003144 ORTHO05D003539 1.1e-07 61.2 100 37.0
BraA07t29471Z Brassica rapa HOM05D003144 ORTHO05D003539 1.1e-07 61.2 98 38.8
Psat4g094920 Pisum sativum HOM05D003144 ORTHO05D003539 1.1e-07 61.2 70 45.7
SalBow8G4131 Salvia bowleyana HOM05D003144 ORTHO05D003539 1.1e-07 61.2 95 37.9
THA.LOC104819202 Tarenaya hassleriana HOM05D003144 ORTHO05D003539 1.1e-07 61.2 94 43.6
vmacro17810 Vaccinium macrocarpon HOM05D003144 ORTHO05D003539 1.1e-07 61.2 70 44.3
A02p44530 Brassica napus HOM05D003144 ORTHO05D003539 1.4e-07 60.8 69 49.3
Ca_22297_v3 Cicer arietinum L. HOM05D003144 ORTHO05D003539 1.4e-07 60.8 70 44.3
Ca_22327_v3 Cicer arietinum L. HOM05D003144 ORTHO05D003539 1.4e-07 60.8 70 44.3
Solyc02g084970.4 Solanum lycopersicum HOM05D003144 ORTHO05D003539 1.4e-07 60.8 70 44.3
BcaNung05718 Brassica carinata HOM05D003144 ORTHO05D003539 1.8e-07 60.5 171 31.6
CiPaw.02G020200 Carya illinoinensis HOM05D003144 ORTHO05D003539 1.8e-07 60.5 98 39.8
CDE06G2543 Ceratophyllum demersum HOM05D003144 ORTHO05D003539 1.8e-07 60.5 132 28.8
Aqoxy1G03996 Aquilegia oxysepala HOM05D003144 ORTHO05D003539 2.4e-07 60.1 71 39.4
Oeu027431.1 Olea europaea HOM05D003144 ORTHO05D003539 2.4e-07 60.1 70 44.3
Peaxi162Scf00366g00815 Petunia axillaris HOM05D003144 ORTHO05D003539 2.4e-07 60.1 70 44.3
SalBow8G0597 Salvia bowleyana HOM05D003144 ORTHO05D003539 2.4e-07 60.1 66 47.0
Sp2g30280 Schrenkiella parvula HOM05D003144 ORTHO05D003539 2.4e-07 60.1 74 47.3
Zm00001eb252000 Zea mays HOM05D003144 ORTHO05D003539 2.4e-07 60.1 100 35.0
C09p11850 Brassica napus HOM05D003144 ORTHO05D003539 3.1e-07 59.7 98 39.8
CANSAT01G2043 Cannabis sativa HOM05D003144 ORTHO05D003539 3.1e-07 59.7 161 32.9
Lj2g0003092 Lotus japonicus HOM05D003144 ORTHO05D003539 3.1e-07 59.7 150 34.7
PSO339G2437 Papaver somniferum HOM05D003144 ORTHO05D003539 3.1e-07 59.7 63 47.6
Potri.007G021600 Populus trichocarpa HOM05D003144 ORTHO05D003539 3.1e-07 59.7 120 35.0
SalBow1G7215 Salvia bowleyana HOM05D003144 ORTHO05D003539 3.1e-07 59.7 95 37.9
SalBow1G7918 Salvia bowleyana HOM05D003144 ORTHO05D003539 3.1e-07 59.7 95 37.9
SEGI_39357 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 3.1e-07 59.7 125 32.0
DCAR_025959 Daucus carota HOM05D003144 ORTHO05D003539 4.0e-07 59.3 66 48.5
Medtr8g077120 Medicago truncatula HOM05D003144 ORTHO05D003539 4.0e-07 59.3 153 30.7
THA.LOC104826672 Tarenaya hassleriana HOM05D003144 ORTHO05D003539 4.0e-07 59.3 94 40.4
Atru.chr3.630 Acer truncatum HOM05D003144 ORTHO05D003539 5.3e-07 58.9 70 47.1
BcaB07g29666 Brassica carinata HOM05D003144 ORTHO05D003539 5.3e-07 58.9 98 37.8
Carub.0008s2807 Capsella rubella HOM05D003144 ORTHO05D003539 5.3e-07 58.9 97 37.1
FAN26G2828 Fragaria x ananassa HOM05D003144 ORTHO05D003539 5.3e-07 58.9 93 35.5
PSO541G4762 Papaver somniferum HOM05D003144 ORTHO05D003539 6.9e-07 58.5 65 44.6
unitig_736.g22638 Utricularia gibba HOM05D003144 ORTHO05D003539 6.9e-07 58.5 70 45.7
BcaC07g39560 Brassica carinata HOM05D003144 ORTHO05D003539 9.0e-07 58.2 71 43.7
ClCG01G019760 Citrullus lanatus HOM05D003144 ORTHO05D003539 9.0e-07 58.2 130 36.9
MELO3C007843.2 Cucumis melo HOM05D003144 ORTHO05D003539 9.0e-07 58.2 98 36.7
DCAR_021484 Daucus carota HOM05D003144 ORTHO05D003539 9.0e-07 58.2 174 33.9
Lalb_Chr05g0212641 Lupinus albus HOM05D003144 ORTHO05D003539 9.0e-07 58.2 178 32.0
Manes.01G138300 Manihot esculenta HOM05D003144 ORTHO05D003539 9.0e-07 58.2 120 34.2
TAR628G0922 Trochodendron aralioides HOM05D003144 ORTHO05D003539 1.2e-06 57.8 97 36.1
arahy.Tifrunner.gnm1.ann1.SCCL3I Arachis hypogaea HOM05D003144 ORTHO05D003539 1.5e-06 57.4 190 27.4
MCO15G090 Micromonas commoda HOM05D003144 ORTHO05D003539 1.5e-06 57.4 132 34.8
BcaB02g10029 Brassica carinata HOM05D003144 ORTHO05D003539 2.0e-06 57.0 148 31.8
BcaC04g23127 Brassica carinata HOM05D003144 ORTHO05D003539 2.0e-06 57.0 98 38.8
CsaV3_6G046460 Cucumis sativus L. HOM05D003144 ORTHO05D003539 2.0e-06 57.0 66 45.5
Nn1g04916 Nelumbo nucifera HOM05D003144 ORTHO05D003539 2.0e-06 57.0 99 36.4
Phvul.002G033600 Phaseolus vulgaris HOM05D003144 ORTHO05D003539 2.0e-06 57.0 157 31.8
Psat7g022240 Pisum sativum HOM05D003144 ORTHO05D003539 2.0e-06 57.0 56 51.8
FAN23G2566 Fragaria x ananassa HOM05D003144 ORTHO05D003539 2.6e-06 56.6 93 34.4
Hma1.2p1_1297F.1_g274090 Hydrangea macrophylla HOM05D003144 ORTHO05D003539 2.6e-06 56.6 193 30.1
PRCOL_00003536 Prasinoderma coloniale HOM05D003144 ORTHO05D003539 3.4e-06 56.2 77 42.9
Aqoxy1G03997 Aquilegia oxysepala HOM05D003144 ORTHO05D003539 4.4e-06 55.8 70 37.1
AUR62004088 Chenopodium quinoa HOM05D003144 ORTHO05D003539 4.4e-06 55.8 159 28.9
C08p26130 Brassica napus HOM05D003144 ORTHO05D003539 5.8e-06 55.5 65 46.2
PSO541G6245 Papaver somniferum HOM05D003144 ORTHO05D003539 5.8e-06 55.5 66 42.4
BcaC06g33334 Brassica carinata HOM05D003144 ORTHO05D003539 7.6e-06 55.1 74 40.5
FvH4_1g12790 Fragaria vesca HOM05D003144 ORTHO05D003539 7.6e-06 55.1 93 33.3
BcaC06g33065 Brassica carinata HOM05D003144 ORTHO05D003539 9.9e-06 54.7 74 40.5
C07p46050 Brassica napus HOM05D003144 ORTHO05D003539 9.9e-06 54.7 74 40.5
BolC7t45122H Brassica oleracea HOM05D003144 ORTHO05D003539 9.9e-06 54.7 74 40.5


User provided reference genes

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