Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.3e-156 553.9 292 100.0
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.5e-71 273.1 172 80.2
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.5e-71 273.1 172 80.2
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-68 263.8 162 78.4
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.2e-66 254.6 159 76.7
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.6e-64 248.1 158 76.6
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-63 247.7 172 72.7
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.5e-63 244.6 155 76.8
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.0e-53 212.6 158 67.7
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.1e-50 201.8 125 80.0
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 7.1e-50 201.8 125 78.4
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-49 201.1 155 67.1
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 1.9e-47 193.7 125 76.0
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-46 190.7 124 72.6
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.8e-46 189.9 134 71.6
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 4.9e-43 179.1 126 73.0
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.4e-43 178.7 112 79.5
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.4e-42 176.8 104 81.7
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.3e-42 174.9 118 74.6
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.7e-41 173.3 142 64.8
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 4.6e-41 172.6 155 50.3
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 1.0e-40 171.4 155 51.6
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 6.6e-40 168.7 155 49.7
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 1.5e-39 167.5 180 47.8
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 1.5e-39 167.5 185 45.9
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 1.9e-39 167.2 185 45.9
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 2.5e-39 166.8 185 45.4
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 4.3e-39 166.0 155 51.6
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 5.6e-39 165.6 185 45.4
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 1.6e-38 164.1 185 46.5
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 1.6e-38 164.1 185 46.5
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 2.1e-38 163.7 187 43.9
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 2.8e-38 163.3 157 50.3
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 2.8e-38 163.3 170 49.4
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 3.6e-38 162.9 181 44.8
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 8.1e-38 161.8 181 47.0
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 8.1e-38 161.8 187 44.4
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 8.1e-38 161.8 185 47.6
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 1.1e-37 161.4 174 43.7
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.4e-37 161.0 187 45.5
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 1.4e-37 161.0 185 43.8
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 1.8e-37 160.6 185 45.4
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.8e-37 160.6 169 49.1
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.8e-37 160.6 187 43.9
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 2.4e-37 160.2 162 50.0
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.4e-37 160.2 102 77.5
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 3.1e-37 159.8 160 51.2
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 3.1e-37 159.8 187 43.9
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 4.0e-37 159.5 157 49.7
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 4.0e-37 159.5 185 44.9
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 4.0e-37 159.5 185 45.4
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.3e-37 159.1 93 83.9
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.3e-37 159.1 95 83.2
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 5.3e-37 159.1 187 43.9
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 6.9e-37 158.7 182 45.1
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 1.2e-36 157.9 157 48.4
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 1.2e-36 157.9 169 46.2
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 1.2e-36 157.9 187 43.9
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 1.5e-36 157.5 187 43.9
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 1.5e-36 157.5 185 41.6
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 1.5e-36 157.5 155 49.0
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.5e-36 157.5 180 45.6
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 2.0e-36 157.1 185 44.9
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 2.0e-36 157.1 156 48.1
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 3.4e-36 156.4 156 48.7
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 3.4e-36 156.4 185 45.4
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 3.4e-36 156.4 185 45.4
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 3.4e-36 156.4 180 44.4
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 5.8e-36 155.6 185 42.2
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 7.6e-36 155.2 185 45.4
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 7.6e-36 155.2 185 45.4
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 7.6e-36 155.2 160 49.4
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 7.6e-36 155.2 160 49.4
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 9.9e-36 154.8 185 44.9
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 9.9e-36 154.8 185 44.3
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 9.9e-36 154.8 156 48.7
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 9.9e-36 154.8 157 46.5
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 1.3e-35 154.5 185 42.2
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 1.7e-35 154.1 185 44.9
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.7e-35 154.1 160 47.5
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 2.2e-35 153.7 185 44.3
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 2.2e-35 153.7 185 44.3
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 2.2e-35 153.7 160 48.1
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.8e-35 152.9 180 45.0
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 3.8e-35 152.9 185 44.3
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.9e-35 152.5 96 79.2
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 6.4e-35 152.1 185 42.7
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 6.4e-35 152.1 187 43.3
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 8.4e-35 151.8 156 46.8
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 8.4e-35 151.8 163 47.2
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 1.1e-34 151.4 185 44.9
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 1.1e-34 151.4 157 44.6
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.1e-34 151.4 156 46.8
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.1e-34 151.4 156 46.8
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 1.1e-34 151.4 167 44.3
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 1.1e-34 151.4 185 43.2
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-34 151.4 110 70.0
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 1.4e-34 151.0 159 44.7
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 1.4e-34 151.0 157 44.6
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.4e-34 151.0 156 46.2
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 1.4e-34 151.0 156 46.8
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 1.4e-34 151.0 163 46.0
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 1.9e-34 150.6 155 46.5
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 1.9e-34 150.6 185 44.3
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.9e-34 150.6 156 46.8
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 1.9e-34 150.6 157 47.1
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 2.4e-34 150.2 157 44.6
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 2.4e-34 150.2 185 40.0
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 3.2e-34 149.8 157 45.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 3.2e-34 149.8 156 46.8
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 4.2e-34 149.4 155 46.5
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 5.4e-34 149.1 181 44.2
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 5.4e-34 149.1 157 46.5
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 5.4e-34 149.1 157 46.5
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 5.4e-34 149.1 157 46.5
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 5.4e-34 149.1 186 41.9
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 7.1e-34 148.7 163 45.4
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 7.1e-34 148.7 155 46.5
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 7.1e-34 148.7 162 45.7
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 9.3e-34 148.3 160 47.5
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 9.3e-34 148.3 185 42.7
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 1.6e-33 147.5 157 47.1
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 1.6e-33 147.5 185 41.1
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 2.1e-33 147.1 155 46.5
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.7e-33 146.7 149 47.7
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.7e-33 146.7 149 47.7
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 2.7e-33 146.7 171 45.0
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 2.7e-33 146.7 171 43.3
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.6e-33 146.0 163 44.8
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 6.0e-33 145.6 163 44.2
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 6.0e-33 145.6 155 45.8
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 1.0e-32 144.8 171 43.3
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 1.8e-32 144.1 155 45.8
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 3.0e-32 143.3 155 45.2
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 3.0e-32 143.3 155 45.2
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 6.7e-32 142.1 186 40.9
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 1.1e-31 141.4 155 45.8
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 1.1e-31 141.4 155 42.6
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 1.1e-31 141.4 155 43.9
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.5e-31 140.2 161 44.7
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 4.3e-31 139.4 156 45.5
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.1e-30 137.1 147 44.9
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 4.8e-30 136.0 206 38.8
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 3.1e-29 133.3 164 42.1
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 5.3e-29 132.5 155 44.5
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 2.6e-28 130.2 162 42.0
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 1.4e-26 124.4 156 38.5
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 7.9e-25 118.6 139 43.2
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-24 117.5 156 41.0
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 2.3e-24 117.1 142 40.8
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 3.0e-24 116.7 157 40.1
SEGI_22978 Sequoiadendron giganteum HOM05D000028 ORTHO05D004513 9.6e-23 111.7 116 59.5
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 6.5e-19 99.0 114 44.7
SEGI_32342 Sequoiadendron giganteum HOM05D001233 ORTHO05D001233 1.8e-16 90.9 93 58.1
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.1e-16 89.4 58 82.8
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 9.7e-15 85.1 100 43.0
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 1.3e-11 74.7 73 46.6
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 3.7e-06 56.6 28 85.7
SEGI_26927 Sequoiadendron giganteum HOM05D000052 ORTHO05D010604 4.8e-06 56.2 98 43.9


User provided reference genes

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