Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.3e-130 468.4 236 100.0
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.9e-38 162.9 130 64.6
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.1e-37 161.0 146 56.8
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 9.5e-37 157.9 121 65.3
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 2.3e-35 153.3 112 67.0
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 2.3e-35 153.3 167 49.7
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 6.8e-35 151.8 145 56.6
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 1.2e-34 151.0 181 47.5
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.5e-34 150.6 131 60.3
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.4e-34 149.4 131 59.5
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 4.4e-34 149.1 155 54.8
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 7.5e-34 148.3 130 58.5
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.3e-33 147.5 133 57.9
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.7e-33 147.1 153 56.2
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.2e-33 146.7 126 59.5
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 2.2e-33 146.7 153 53.6
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.9e-33 146.4 130 57.7
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.9e-33 146.4 145 53.8
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 3.7e-33 146.0 169 47.9
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 4.9e-33 145.6 122 59.8
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 4.9e-33 145.6 159 50.9
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 6.4e-33 145.2 112 64.3
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 6.4e-33 145.2 123 56.9
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 8.3e-33 144.8 134 56.0
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 8.3e-33 144.8 135 56.3
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.1e-32 144.4 159 50.9
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.1e-32 144.4 130 54.6
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 1.1e-32 144.4 125 57.6
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 1.1e-32 144.4 130 60.0
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.4e-32 144.1 185 44.9
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 1.8e-32 143.7 130 56.2
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.4e-32 143.3 158 51.9
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 2.4e-32 143.3 130 56.2
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 2.4e-32 143.3 106 66.0
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 3.2e-32 142.9 130 54.6
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 4.1e-32 142.5 143 54.5
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 4.1e-32 142.5 133 57.1
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 5.4e-32 142.1 183 45.4
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 5.4e-32 142.1 112 62.5
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 9.2e-32 141.4 130 55.4
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 9.2e-32 141.4 112 61.6
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.2e-31 141.0 179 45.3
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.2e-31 141.0 177 45.2
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.6e-31 140.6 151 49.7
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.6e-31 140.6 122 58.2
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 1.6e-31 140.6 141 56.0
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.6e-31 140.6 130 55.4
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 2.0e-31 140.2 134 53.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.0e-31 140.2 180 46.7
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.0e-31 140.2 122 55.7
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 2.7e-31 139.8 130 53.8
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 2.7e-31 139.8 130 53.8
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 2.7e-31 139.8 130 53.8
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 3.5e-31 139.4 130 53.1
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.5e-31 139.4 196 46.9
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 4.6e-31 139.0 130 53.8
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 4.6e-31 139.0 130 53.8
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 5.9e-31 138.7 159 49.7
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 5.9e-31 138.7 130 53.8
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 5.9e-31 138.7 158 50.6
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 7.8e-31 138.3 149 53.0
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 7.8e-31 138.3 167 48.5
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 1.3e-30 137.5 167 47.3
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.3e-30 137.5 169 49.1
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.7e-30 137.1 130 53.8
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 1.7e-30 137.1 130 54.6
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 2.3e-30 136.7 112 62.5
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 3.9e-30 136.0 132 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 6.6e-30 135.2 141 48.9
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.1e-29 134.4 152 48.7
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.1e-29 134.4 143 51.7
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.1e-29 134.4 130 51.5
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 1.1e-29 134.4 130 53.1
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.5e-29 134.0 112 58.9
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 9.5e-29 131.3 130 51.5
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.6e-28 130.6 164 46.3
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 3.6e-28 129.4 132 51.5
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 4.7e-28 129.0 151 45.7
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.1e-27 126.3 172 43.0
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.1e-27 126.3 172 43.0
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 4.0e-27 125.9 184 42.9
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 5.2e-27 125.6 156 44.9
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.3e-25 120.9 111 56.8
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 1.1e-24 117.9 147 44.2
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 7.8e-23 111.7 112 53.6
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 7.8e-23 111.7 89 61.8
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.3e-22 110.9 130 49.2
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.7e-22 110.5 140 44.3
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 8.6e-22 108.2 189 38.1
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.1e-21 107.8 100 57.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.5e-21 106.7 139 46.8
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.3e-21 106.3 140 47.9
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 3.3e-21 106.3 107 54.2
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.6e-20 104.0 134 47.0
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 5.2e-19 99.0 180 41.1
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 6.8e-19 98.6 121 45.5
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 8.9e-19 98.2 146 41.8
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.2e-18 97.8 99 51.5
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.2e-18 97.8 89 51.7
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.6e-18 96.7 101 49.5
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 4.4e-18 95.9 134 43.3
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 4.1e-16 89.4 134 44.8
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.0e-15 85.5 99 48.5
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.3e-13 79.7 89 50.6
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.4e-11 74.3 75 53.3
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 4.9e-09 65.9 60 56.7
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.1e-08 62.8 83 45.8
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.2e-07 61.2 51 58.8


User provided reference genes

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