Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21638 Sequoiadendron giganteum HOM05D025566 ORTHO05D004918 5.2e-301 1036.9 536 100.0
SEGI_16741 Sequoiadendron giganteum HOM05D025566 ORTHO05D004918 4.5e-236 821.2 425 100.0
SEGI_06055 Sequoiadendron giganteum HOM05D025566 ORTHO05D004918 4.9e-174 615.1 465 72.0
ATR0705G047 Amborella trichopoda HOM05D004467 ORTHO05D004918 2.7e-31 141.0 426 31.2
Nn3g18160 Nelumbo nucifera HOM05D004467 ORTHO05D004918 8.5e-25 119.4 433 28.9
SEGI_33361 Sequoiadendron giganteum HOM05D025566 ORTHO05D385763 2.7e-23 114.4 610 26.2
TAR626G1578 Trochodendron aralioides HOM05D004467 ORTHO05D004918 1.7e-20 105.1 541 26.4
TAR636G0217 Trochodendron aralioides HOM05D004467 ORTHO05D004918 2.2e-20 104.8 541 26.4
TAR383G0828 Trochodendron aralioides HOM05D004467 ORTHO05D004918 6.9e-19 99.8 418 28.7
Cpa.g.sc40.31 Carica papaya HOM05D004467 ORTHO05D004918 4.8e-12 77.0 416 29.3
HPP92_027881 Vanilla planifolia HOM05D004467 ORTHO05D004918 3.1e-11 74.3 422 25.4
MBI01_g24452_MAGBIO Magnolia biondii HOM05D004467 ORTHO05D004918 1.2e-10 72.4 448 24.3
PSO210G6045 Papaver somniferum HOM05D004467 ORTHO05D004918 2.6e-10 71.2 433 26.8
FAN23G1822 Fragaria x ananassa HOM05D004467 ORTHO05D004918 7.7e-10 69.7 385 27.5
FAN28G1510 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.3e-09 68.9 386 26.9
Atru.chr7.1422 Acer truncatum HOM05D004467 ORTHO05D004918 3.8e-09 67.4 451 26.4
Actinidia09440 Actinidia chinensis HOM05D004467 ORTHO05D004918 3.8e-09 67.4 386 26.9
Aqoxy7G01500 Aquilegia oxysepala HOM05D004467 ORTHO05D004918 5.0e-09 67.0 395 27.8
Haze_25793 Corylus avellana HOM05D004467 ORTHO05D004918 5.0e-09 67.0 463 27.2
Ciclev10008049m.g Citrus clementina HOM05D004467 ORTHO05D004918 6.5e-09 66.6 448 26.1
PSO210G7819 Papaver somniferum HOM05D004467 ORTHO05D004918 8.5e-09 66.2 431 26.5
FAN26G1468 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.1e-08 65.9 386 26.2
FAN26G2528 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.1e-08 65.9 386 26.2
Gorai.009G027000 Gossypium raimondii HOM05D004467 ORTHO05D004918 1.9e-08 65.1 455 25.9
Hma1.2p1_0945F.1_g240200 Hydrangea macrophylla HOM05D004467 ORTHO05D004918 2.5e-08 64.7 405 27.7
COL.COLO4_34790 Corchorus olitorius HOM05D004467 ORTHO05D004918 3.2e-08 64.3 455 26.2
FAN19G0416 Fragaria x ananassa HOM05D004467 ORTHO05D004918 4.2e-08 63.9 384 27.1
Cfa003215 Carpinus fangiana HOM05D004467 ORTHO05D004918 5.5e-08 63.5 461 26.5
Gohir.A05G025400 Gossypium hirsutum HOM05D004467 ORTHO05D004918 5.5e-08 63.5 455 25.9
Prupe.7G224200 Prunus persica HOM05D004467 ORTHO05D004918 5.5e-08 63.5 448 24.8
FvH4_1g05760 Fragaria vesca HOM05D004467 ORTHO05D004918 7.2e-08 63.2 384 27.1
Gohir.D05G026900 Gossypium hirsutum HOM05D004467 ORTHO05D004918 7.2e-08 63.2 455 25.9
MD15G1193100 Malus domestica HOM05D004467 ORTHO05D004918 9.4e-08 62.8 446 24.7
CiPaw.03G227200 Carya illinoinensis HOM05D004467 ORTHO05D004918 1.6e-07 62.0 444 26.8
Actinidia20407 Actinidia chinensis HOM05D004467 ORTHO05D004918 3.6e-07 60.8 432 25.2
Thecc.09G104300 Theobroma cacao HOM05D004467 ORTHO05D004918 6.1e-07 60.1 453 26.3
RcHm_v2.0_Chr2g0091401 Rosa chinensis HOM05D004467 ORTHO05D004918 8.0e-07 59.7 381 28.1
MBI01_g39827_MAGBIO Magnolia biondii HOM05D004467 ORTHO05D004918 1.0e-06 59.3 227 28.2
PGR102G2224 Punica granatum HOM05D004467 ORTHO05D004918 2.3e-06 58.2 384 27.1
Duzib168G1064 Durio zibethinus HOM05D004467 ORTHO05D004918 3.0e-06 57.8 453 24.5
CSS0050424 Camellia sinensis var. sinensis HOM05D004467 ORTHO05D004918 8.8e-06 56.2 416 26.4
CDE05G2925 Ceratophyllum demersum HOM05D004467 ORTHO05D004918 8.8e-06 56.2 417 24.5
Duzib187G1021 Durio zibethinus HOM05D004467 ORTHO05D004918 8.8e-06 56.2 467 25.5


User provided reference genes

Program Settings