Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 3.6e-48 194.5 92 100.0
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.2e-40 169.5 91 82.4
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.2e-40 169.5 91 82.4
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 3.6e-40 167.9 91 85.7
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 4.7e-40 167.5 91 83.5
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 6.1e-40 167.2 91 83.5
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 6.1e-40 167.2 91 84.6
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 7.9e-40 166.8 91 84.6
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.0e-39 166.4 91 84.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 1.0e-39 166.4 91 83.5
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 1.0e-39 166.4 91 84.6
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 1.4e-39 166.0 91 82.4
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.8e-39 165.6 91 82.4
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 3.9e-39 164.5 91 83.5
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 3.9e-39 164.5 91 82.4
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.9e-39 164.5 91 85.7
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.9e-39 164.5 91 85.7
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 5.2e-39 164.1 91 82.4
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 5.2e-39 164.1 91 83.5
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.7e-39 163.7 91 78.0
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 6.7e-39 163.7 91 84.6
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 8.8e-39 163.3 91 82.4
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 8.8e-39 163.3 91 82.4
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.1e-38 162.9 91 80.2
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 1.1e-38 162.9 91 84.6
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 1.1e-38 162.9 91 84.6
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.1e-38 162.9 91 81.3
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.1e-38 162.9 91 82.4
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 1.5e-38 162.5 91 80.2
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 1.5e-38 162.5 91 84.6
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 1.5e-38 162.5 91 85.7
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 1.5e-38 162.5 91 84.6
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 1.5e-38 162.5 91 81.3
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.5e-38 162.5 91 80.2
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 2.0e-38 162.2 91 81.3
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.0e-38 162.2 91 82.4
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 2.6e-38 161.8 91 84.6
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 5.7e-38 160.6 91 76.9
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 5.7e-38 160.6 91 80.2
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.7e-38 160.6 91 82.4
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 5.7e-38 160.6 91 83.5
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 7.4e-38 160.2 91 81.3
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 81.3
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 81.3
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 82.4
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 81.3
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 79.1
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 81.3
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 83.5
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 9.7e-38 159.8 91 80.2
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 1.3e-37 159.5 91 81.3
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 1.3e-37 159.5 91 81.3
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 1.3e-37 159.5 91 81.3
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 1.3e-37 159.5 91 82.4
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 1.3e-37 159.5 91 82.4
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 1.3e-37 159.5 91 79.1
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 1.7e-37 159.1 91 81.3
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 2.2e-37 158.7 91 81.3
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 2.2e-37 158.7 91 81.3
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 2.8e-37 158.3 91 79.1
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 2.8e-37 158.3 91 79.1
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 2.8e-37 158.3 91 78.0
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 3.7e-37 157.9 91 81.3
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 4.8e-37 157.5 103 74.8
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 6.3e-37 157.1 91 82.4
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 6.3e-37 157.1 91 80.2
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 1.1e-36 156.4 91 80.2
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.1e-36 156.4 91 76.9
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.1e-36 156.4 91 78.0
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 1.1e-36 156.4 91 80.2
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.4e-36 156.0 91 80.2
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 1.4e-36 156.0 91 79.1
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 1.4e-36 156.0 91 79.1
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.4e-36 156.0 91 81.3
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 1.8e-36 155.6 91 79.1
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.4e-36 155.2 91 79.1
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 3.1e-36 154.8 91 76.9
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 4.1e-36 154.5 91 76.9
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 4.1e-36 154.5 91 76.9
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 4.1e-36 154.5 91 75.8
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 5.3e-36 154.1 91 81.3
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 5.3e-36 154.1 91 80.2
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 80.2
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 7.0e-36 153.7 91 75.8
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 9.1e-36 153.3 91 74.7
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 9.1e-36 153.3 91 75.8
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 9.1e-36 153.3 91 75.8
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.0e-35 152.1 91 75.8
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 3.5e-35 151.4 91 73.6
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 3.5e-35 151.4 91 78.0
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 4.5e-35 151.0 91 75.8
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 1.3e-34 149.4 91 74.7
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 1.7e-34 149.1 91 75.8
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 2.2e-34 148.7 91 75.8
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 2.9e-34 148.3 85 82.4
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 2.9e-34 148.3 85 82.4
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 5.0e-34 147.5 91 76.9
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 8.5e-34 146.7 91 73.6
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 8.5e-34 146.7 119 62.2
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 1.1e-33 146.4 91 78.0
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 5.5e-33 144.1 83 79.5
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 9.4e-33 143.3 124 56.5
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 5.2e-31 137.5 81 77.8
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.0e-30 135.6 74 83.8
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.2e-29 132.1 80 78.8
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 1.0e-26 123.2 90 61.1
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 2.2e-26 122.1 62 87.1
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 2.2e-26 122.1 60 91.7
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 3.8e-26 121.3 85 70.6
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.5e-25 118.6 59 86.4
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 4.2e-25 117.9 77 71.4
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 1.2e-24 116.3 113 54.0
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 1.0e-23 113.2 60 85.0
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 4.0e-23 111.3 71 73.2
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.3e-21 106.3 91 53.8
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 4.5e-19 97.8 65 69.2
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 5.9e-19 97.4 93 53.8
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 7.7e-19 97.1 63 69.8
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 7.7e-19 97.1 66 66.7
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.8e-18 94.7 70 60.0
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.2e-11 73.2 91 41.8
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 4.5e-11 71.2 91 45.1
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.7e-10 69.3 91 41.8
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.7e-10 69.3 44 72.7
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.5e-09 66.2 29 93.1


User provided reference genes

Program Settings