Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.6e-77 292.7 149 100.0
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 3.4e-24 115.5 77 70.1
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 4.4e-24 115.2 110 50.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 4.4e-24 115.2 111 56.8
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 5.8e-24 114.8 76 71.1
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 9.9e-24 114.0 77 67.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.3e-23 113.6 143 45.5
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.3e-23 113.6 112 54.5
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.3e-23 113.6 111 56.8
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.7e-23 113.2 109 56.0
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.7e-23 113.2 77 71.4
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 2.2e-23 112.8 99 57.6
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 2.2e-23 112.8 124 50.8
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.8e-23 112.1 77 66.2
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 3.8e-23 112.1 77 67.5
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 4.9e-23 111.7 77 66.2
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 6.4e-23 111.3 77 66.2
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 8.4e-23 110.9 110 50.0
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.1e-22 110.5 126 50.8
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.1e-22 110.5 83 62.7
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.9e-22 109.8 142 43.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 2.4e-22 109.4 75 66.7
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.2e-22 109.0 108 50.9
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 4.2e-22 108.6 74 67.6
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.2e-22 108.6 76 65.8
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 4.2e-22 108.6 77 63.6
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 4.2e-22 108.6 77 63.6
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 4.2e-22 108.6 76 68.4
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 5.4e-22 108.2 121 48.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 5.4e-22 108.2 98 57.1
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 7.1e-22 107.8 91 61.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 7.1e-22 107.8 78 62.8
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.2e-21 107.1 77 64.9
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.2e-21 107.1 138 43.5
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 1.2e-21 107.1 112 48.2
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.6e-21 106.7 114 52.6
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.6e-21 106.7 74 67.6
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.6e-21 106.7 114 47.4
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 2.1e-21 106.3 83 63.9
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 2.1e-21 106.3 109 50.5
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.1e-21 106.3 142 43.0
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.7e-21 105.9 115 51.3
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.7e-21 105.9 90 56.7
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 2.7e-21 105.9 77 66.2
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.7e-21 105.9 99 56.6
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.7e-21 105.9 75 66.7
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 3.5e-21 105.5 77 61.0
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 3.5e-21 105.5 77 67.5
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 3.5e-21 105.5 110 48.2
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 4.6e-21 105.1 87 62.1
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 4.6e-21 105.1 114 46.5
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 6.0e-21 104.8 89 57.3
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 6.0e-21 104.8 114 51.8
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.0e-21 104.8 124 49.2
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 6.0e-21 104.8 113 50.4
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 6.0e-21 104.8 77 67.5
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 7.8e-21 104.4 138 42.8
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 7.8e-21 104.4 75 66.7
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 7.8e-21 104.4 77 66.2
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.0e-20 104.0 118 49.2
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 1.0e-20 104.0 141 44.7
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 1.0e-20 104.0 123 49.6
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.3e-20 103.6 74 64.9
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 1.7e-20 103.2 82 58.5
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.7e-20 103.2 142 43.7
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.3e-20 102.8 148 45.3
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.3e-20 102.8 76 63.2
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 66.2
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 66.2
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 66.2
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 66.2
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 66.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 64.9
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.0e-20 102.4 124 48.4
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 3.0e-20 102.4 124 48.4
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 3.0e-20 102.4 77 59.7
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.9e-20 102.1 78 64.1
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 3.9e-20 102.1 77 62.3
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 5.1e-20 101.7 109 45.9
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 6.6e-20 101.3 111 47.7
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 6.6e-20 101.3 77 63.6
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 6.6e-20 101.3 80 61.2
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 6.6e-20 101.3 80 61.2
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 8.7e-20 100.9 118 49.2
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 8.7e-20 100.9 77 61.0
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.5e-19 100.1 113 50.4
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.5e-19 99.4 114 50.0
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 3.3e-19 99.0 75 62.7
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 3.3e-19 99.0 77 64.9
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 3.3e-19 99.0 77 61.0
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.3e-19 99.0 108 47.2
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 4.3e-19 98.6 70 61.4
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 5.6e-19 98.2 74 63.5
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 7.3e-19 97.8 123 47.2
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.3e-18 97.1 142 42.3
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.6e-18 96.7 77 57.1
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.6e-18 95.5 137 43.1
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.8e-17 93.2 63 66.7
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 2.4e-17 92.8 146 39.0
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 9.0e-17 90.9 69 62.3
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.6e-16 89.4 97 43.3
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.4e-14 83.6 68 57.4
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 1.4e-14 83.6 127 44.1
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.2e-14 82.0 68 54.4
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.7e-13 79.3 75 49.3
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 6.7e-12 74.7 81 43.2
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 2.5e-11 72.8 77 46.8
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 3.3e-11 72.4 55 63.6
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.3e-11 72.4 80 52.5
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 8.1e-10 67.8 109 39.4
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 4.0e-09 65.5 76 47.4
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.2e-08 63.9 111 36.0


User provided reference genes

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