Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21553 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.6e-91 339.3 162 100.0
Cc08_g05800 Coffea canephora HOM05D004228 ORTHO05D005137 5.7e-41 171.4 101 77.2
Duzib160G0712 Durio zibethinus HOM05D004228 ORTHO05D005137 1.3e-40 170.2 101 77.2
FAN14G1073 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.7e-40 169.9 101 76.2
ClCG09G003440 Citrullus lanatus HOM05D004228 ORTHO05D005137 2.8e-40 169.1 101 75.2
Migut.E01375 Erythranthe guttata HOM05D004228 ORTHO05D005137 2.8e-40 169.1 101 76.2
RcHm_v2.0_Chr2g0132121 Rosa chinensis HOM05D004228 ORTHO05D005137 2.8e-40 169.1 101 77.2
Ah.09g231750 Amaranthus hybridus HOM05D004228 ORTHO05D005137 3.7e-40 168.7 101 77.2
AUR62002649 Chenopodium quinoa HOM05D004228 ORTHO05D005137 3.7e-40 168.7 101 76.2
Gohir.A10G000600 Gossypium hirsutum HOM05D004228 ORTHO05D005137 3.7e-40 168.7 101 76.2
Gohir.D10G000700 Gossypium hirsutum HOM05D004228 ORTHO05D005137 3.7e-40 168.7 101 76.2
Gorai.011G001100 Gossypium raimondii HOM05D004228 ORTHO05D005137 3.7e-40 168.7 101 76.2
Atru.chr1.2817 Acer truncatum HOM05D004228 ORTHO05D005137 4.8e-40 168.3 101 76.2
COL.COLO4_26790 Corchorus olitorius HOM05D004228 ORTHO05D005137 4.8e-40 168.3 101 76.2
MBI14_g16439_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 4.8e-40 168.3 97 78.4
Ciclev10024933m.g Citrus clementina HOM05D004228 ORTHO05D005137 6.3e-40 167.9 97 78.4
CSS0026873 Camellia sinensis var. sinensis HOM05D004228 ORTHO05D005137 8.2e-40 167.5 97 77.3
FvH4_6g28160 Fragaria vesca HOM05D004228 ORTHO05D005137 8.2e-40 167.5 101 75.2
FAN09G0969 Fragaria x ananassa HOM05D004228 ORTHO05D005137 8.2e-40 167.5 101 75.2
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 8.2e-40 167.5 101 74.3
GSVIVG01016092001 Vitis vinifera HOM05D004228 ORTHO05D005137 8.2e-40 167.5 97 77.3
Lsat_1_v5_gn_6_17241 Lactuca sativa HOM05D004228 ORTHO05D005137 1.1e-39 167.2 101 76.2
ATR0789G048 Amborella trichopoda HOM05D004228 ORTHO05D005137 1.4e-39 166.8 101 75.2
Thecc.06G048200 Theobroma cacao HOM05D004228 ORTHO05D005137 1.4e-39 166.8 101 75.2
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea HOM05D004228 ORTHO05D005137 1.8e-39 166.4 92 79.3
CANSAT64G2586 Cannabis sativa HOM05D004228 ORTHO05D005137 1.8e-39 166.4 92 81.5
CsaV3_7G031770 Cucumis sativus L. HOM05D004228 ORTHO05D005137 1.8e-39 166.4 101 74.3
FAN02G0630 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.8e-39 166.4 92 80.4
EL10Ac8g19421 Beta vulgaris HOM05D004228 ORTHO05D005137 2.4e-39 166.0 101 75.2
Actinidia25487 Actinidia chinensis HOM05D004228 ORTHO05D005137 3.1e-39 165.6 101 74.3
MELO3C023479.2 Cucumis melo HOM05D004228 ORTHO05D005137 3.1e-39 165.6 101 73.3
Lsat_1_v5_gn_3_53241 Lactuca sativa HOM05D004228 ORTHO05D005137 3.1e-39 165.6 101 77.2
Potri.003G185600 Populus trichocarpa HOM05D004228 ORTHO05D005137 3.1e-39 165.6 91 82.4
Potri.003G185776 Populus trichocarpa HOM05D004228 ORTHO05D005137 3.1e-39 165.6 91 82.4
Potri.003G185951 Populus trichocarpa HOM05D004228 ORTHO05D005137 3.1e-39 165.6 91 82.4
Sabra03G0135800 Salix brachista HOM05D004228 ORTHO05D005137 3.1e-39 165.6 91 82.4
MSTRG.13911 Avicennia marina HOM05D004228 ORTHO05D005137 4.1e-39 165.2 101 74.3
DCAR_030908 Daucus carota HOM05D004228 ORTHO05D005137 4.1e-39 165.2 92 81.5
Lalb_Chr18g0048351 Lupinus albus HOM05D004228 ORTHO05D005137 4.1e-39 165.2 92 80.4
SGA_v2.0_scaffold121G33058 Striga asiatica HOM05D004228 ORTHO05D005137 4.1e-39 165.2 97 77.3
Actinidia18265 Actinidia chinensis HOM05D004228 ORTHO05D005137 5.3e-39 164.9 101 74.3
Manes.11G069700 Manihot esculenta HOM05D004228 ORTHO05D005137 5.3e-39 164.9 91 80.2
TWI12G1267 Tripterygium wilfordii HOM05D004228 ORTHO05D005137 5.3e-39 164.9 101 75.2
HPP92_017167 Vanilla planifolia HOM05D004228 ORTHO05D005137 5.3e-39 164.9 101 75.2
Peaxi162Scf00193g00726 Petunia axillaris HOM05D004228 ORTHO05D005137 6.9e-39 164.5 97 76.3
unitig_37.g12907 Utricularia gibba HOM05D004228 ORTHO05D005137 6.9e-39 164.5 97 78.4
Ca_13679_v3 Cicer arietinum L. HOM05D004228 ORTHO05D005137 9.1e-39 164.1 92 78.3
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 9.1e-39 164.1 101 73.3
Solyc08g075390.4 Solanum lycopersicum HOM05D004228 ORTHO05D005137 9.1e-39 164.1 97 76.3
Sopen08g024020 Solanum pennellii HOM05D004228 ORTHO05D005137 9.1e-39 164.1 97 76.3
Haze_16698 Corylus avellana HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 73.3
DCAR_002193 Daucus carota HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 73.3
Dinv21435 Davidia involucrata HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 74.3
HanXRQChr13g0411161 Helianthus annuus HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 76.2
PSO017G5477 Papaver somniferum HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 74.3
PSO170G5168 Papaver somniferum HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 74.3
Phvul.006G018900 Phaseolus vulgaris HOM05D004228 ORTHO05D005137 1.2e-38 163.7 92 78.3
Prupe.3G104700 Prunus persica HOM05D004228 ORTHO05D005137 1.2e-38 163.7 101 74.3
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 1.5e-38 163.3 101 72.3
HanXRQChr17g0558091 Helianthus annuus HOM05D004228 ORTHO05D005137 1.5e-38 163.3 97 76.3
Nitab4.5_0000030g0500 Nicotiana tabacum HOM05D004228 ORTHO05D005137 1.5e-38 163.3 97 75.3
THA.LOC104813593 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 1.5e-38 163.3 91 80.2
CiPaw.02G164000 Carya illinoinensis HOM05D004228 ORTHO05D005137 2.0e-38 162.9 101 73.3
CAN.G930.1 Capsicum annuum HOM05D004228 ORTHO05D005137 2.6e-38 162.5 97 74.2
Glyma.13G072500 Glycine max HOM05D004228 ORTHO05D005137 2.6e-38 162.5 92 77.2
Sed0017026 Sechium edule HOM05D004228 ORTHO05D005137 2.6e-38 162.5 101 72.3
SMO337G0028 Selaginella moellendorffii HOM05D004228 ORTHO05D005137 2.6e-38 162.5 92 79.3
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis HOM05D004228 ORTHO05D005137 3.4e-38 162.2 120 63.3
MELO3C023481.2 Cucumis melo HOM05D004228 ORTHO05D005137 3.4e-38 162.2 97 75.3
Glyma.20G046501 Glycine max HOM05D004228 ORTHO05D005137 4.5e-38 161.8 97 73.2
Lsat_1_v5_gn_0_21260 Lactuca sativa HOM05D004228 ORTHO05D005137 4.5e-38 161.8 97 75.3
MD17G1227300 Malus domestica HOM05D004228 ORTHO05D005137 4.5e-38 161.8 102 74.5
Oeu057157.1 Olea europaea HOM05D004228 ORTHO05D005137 4.5e-38 161.8 97 73.2
Psat4g022640 Pisum sativum HOM05D004228 ORTHO05D005137 4.5e-38 161.8 92 76.1
AUR62034058 Chenopodium quinoa HOM05D004228 ORTHO05D005137 7.7e-38 161.0 89 79.8
Zm00001eb192570 Zea mays HOM05D004228 ORTHO05D005137 7.7e-38 161.0 91 76.9
Eucgr.J03134 Eucalyptus grandis HOM05D004228 ORTHO05D005137 1.0e-37 160.6 101 74.3
Aqoxy7G02340 Aquilegia oxysepala HOM05D004228 ORTHO05D005137 1.3e-37 160.2 101 70.3
MD00G1188200 Malus domestica HOM05D004228 ORTHO05D005137 1.3e-37 160.2 95 76.8
MD09G1228800 Malus domestica HOM05D004228 ORTHO05D005137 1.3e-37 160.2 95 76.8
Rhsim08G0202500 Rhododendron simsii HOM05D004228 ORTHO05D005137 1.3e-37 160.2 101 73.3
VMungo0540G0565 Vigna mungo HOM05D004228 ORTHO05D005137 1.3e-37 160.2 97 72.2
Medtr3g437740 Medicago truncatula HOM05D004228 ORTHO05D005137 1.7e-37 159.8 92 77.2
ECA240G2553 Erigeron canadensis HOM05D004228 ORTHO05D005137 2.2e-37 159.5 101 73.3
vmacro19079 Vaccinium macrocarpon HOM05D004228 ORTHO05D005137 2.2e-37 159.5 101 72.3
Lsat_1_v5_gn_0_21180 Lactuca sativa HOM05D004228 ORTHO05D005137 2.9e-37 159.1 97 75.3
Nn8g40122 Nelumbo nucifera HOM05D004228 ORTHO05D005137 2.9e-37 159.1 101 71.3
THA.LOC104808168 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 2.9e-37 159.1 91 78.0
Os02g0793300 Oryza sativa ssp. japonica HOM05D004228 ORTHO05D005137 5.0e-37 158.3 92 75.0
Pp3c5_190 Physcomitrium patens HOM05D004228 ORTHO05D005137 5.0e-37 158.3 120 61.7
Nitab4.5_0002244g0120 Nicotiana tabacum HOM05D004228 ORTHO05D005137 6.5e-37 157.9 97 74.2
Thhalv10018131m.g Eutrema salsugineum HOM05D004228 ORTHO05D005137 8.5e-37 157.5 91 78.0
Aa31LG4G1300 Aethionema arabicum HOM05D004228 ORTHO05D005137 1.4e-36 156.8 91 75.8
BcaNung04171 Brassica carinata HOM05D004228 ORTHO05D005137 1.4e-36 156.8 91 76.9
A07p26990 Brassica napus HOM05D004228 ORTHO05D005137 1.4e-36 156.8 91 76.9
C06p29710 Brassica napus HOM05D004228 ORTHO05D005137 1.4e-36 156.8 91 76.9
BolC6t38132H Brassica oleracea HOM05D004228 ORTHO05D005137 1.4e-36 156.8 91 76.9
BraA07t30343Z Brassica rapa HOM05D004228 ORTHO05D005137 1.4e-36 156.8 91 76.9
Lj6g0018144 Lotus japonicus HOM05D004228 ORTHO05D005137 1.4e-36 156.8 92 76.1
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea HOM05D004228 ORTHO05D005137 1.9e-36 156.4 92 75.0
Sp5g34750 Schrenkiella parvula HOM05D004228 ORTHO05D005137 1.9e-36 156.4 91 76.9
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea HOM05D004228 ORTHO05D005137 2.5e-36 156.0 92 75.0
ATR0580G052 Amborella trichopoda HOM05D004228 ORTHO05D005137 3.2e-36 155.6 97 73.2
BcaB02g08706 Brassica carinata HOM05D004228 ORTHO05D005137 4.2e-36 155.2 91 76.9
BraA07t31978Z Brassica rapa HOM05D004228 ORTHO05D005137 4.2e-36 155.2 91 76.9
AL2G40390 Arabidopsis lyrata HOM05D004228 ORTHO05D005137 5.5e-36 154.8 91 76.9
CARHR073460 Cardamine hirsuta HOM05D004228 ORTHO05D005137 5.5e-36 154.8 91 76.9
BcaB02g07234 Brassica carinata HOM05D004228 ORTHO05D005137 7.2e-36 154.5 91 75.8
BcaC08g47528 Brassica carinata HOM05D004228 ORTHO05D005137 1.2e-35 153.7 91 75.8
A07p44700 Brassica napus HOM05D004228 ORTHO05D005137 1.2e-35 153.7 91 76.9
C06p53520 Brassica napus HOM05D004228 ORTHO05D005137 1.2e-35 153.7 91 75.8
BolC6t40368H Brassica oleracea HOM05D004228 ORTHO05D005137 1.2e-35 153.7 91 75.8
CsaV3_7G031780 Cucumis sativus L. HOM05D004228 ORTHO05D005137 1.2e-35 153.7 100 70.0
VMungo1080G1878 Vigna mungo HOM05D004228 ORTHO05D005137 1.2e-35 153.7 92 73.9
ECA240G4106 Erigeron canadensis HOM05D004228 ORTHO05D005137 2.7e-35 152.5 97 73.2
AT1G79690 Arabidopsis thaliana HOM05D004228 ORTHO05D005137 3.6e-35 152.1 91 75.8
MELO3C023478.2 Cucumis melo HOM05D004228 ORTHO05D005137 3.6e-35 152.1 100 69.0
RcHm_v2.0_Chr2g0132171 Rosa chinensis HOM05D004228 ORTHO05D005137 3.6e-35 152.1 89 77.5
Carub.0002s2655 Capsella rubella HOM05D004228 ORTHO05D005137 1.0e-34 150.6 91 75.8
Mapoly0059s0059 Marchantia polymorpha HOM05D004228 ORTHO05D005137 3.0e-34 149.1 120 59.2
CBR_g49131 Chara braunii HOM05D007088 ORTHO05D008477 5.3e-31 138.3 93 66.7
Lsat_1_v5_gn_6_87921 Lactuca sativa HOM05D004228 ORTHO05D005137 1.1e-15 87.4 53 71.7
SEGI_36238 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.1e-07 58.9 33 84.8
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.2e-06 57.4 33 81.8
SEGI_28830 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.2e-06 57.4 33 81.8
SEGI_07407 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-06 55.8 32 81.2
SEGI_16432 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-06 55.8 32 81.2
SEGI_39095 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-06 55.8 32 81.2
SEGI_39986 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.5e-06 55.8 32 81.2
SEGI_26637 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 7.7e-06 54.7 32 78.1


User provided reference genes

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