Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21460 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 0.0e+00 1970.7 973 100.0
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 3.3e-19 101.7 954 24.5
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 9.0e-17 93.6 258 33.3
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 9.0e-17 93.6 265 34.3
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 1.2e-16 93.2 309 31.4
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 3.4e-16 91.7 264 31.4
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 4.5e-16 91.3 256 34.0
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 5.9e-16 90.9 276 33.7
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 5.9e-16 90.9 255 32.2
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 1.7e-15 89.4 266 32.7
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 1.7e-15 89.4 326 29.4
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 1.7e-15 89.4 267 31.5
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.2e-15 89.0 253 32.4
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 2.2e-15 89.0 257 33.9
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 2.9e-15 88.6 339 30.1
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 2.9e-15 88.6 350 31.1
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 2.9e-15 88.6 307 30.0
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.8e-15 88.2 343 29.7
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 3.8e-15 88.2 423 30.3
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 5.0e-15 87.8 253 32.4
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 5.0e-15 87.8 256 31.6
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 6.5e-15 87.4 255 32.9
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 6.5e-15 87.4 321 30.2
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 8.5e-15 87.0 258 29.8
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.4e-14 86.3 253 32.8
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 1.4e-14 86.3 280 31.8
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 1.4e-14 86.3 258 30.2
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 1.9e-14 85.9 264 33.7
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 2.5e-14 85.5 421 28.0
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 2.5e-14 85.5 268 31.7
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.5e-14 85.5 358 31.0
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 2.5e-14 85.5 305 28.9
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 3.2e-14 85.1 315 28.9
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 3.2e-14 85.1 259 31.7
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 4.2e-14 84.7 265 32.1
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 4.2e-14 84.7 260 35.0
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 4.2e-14 84.7 277 31.8
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 5.5e-14 84.3 270 33.3
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 5.5e-14 84.3 307 30.3
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 7.2e-14 84.0 330 30.3
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 7.2e-14 84.0 322 28.9
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 9.4e-14 83.6 330 29.4
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 9.4e-14 83.6 276 31.9
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.2e-13 83.2 290 30.3
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 1.6e-13 82.8 324 30.2
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 1.6e-13 82.8 148 41.9
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 1.6e-13 82.8 290 30.3
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 2.1e-13 82.4 146 40.4
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 2.7e-13 82.0 297 29.6
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 2.7e-13 82.0 293 29.4
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 3.6e-13 81.6 272 32.7
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 3.6e-13 81.6 259 32.8
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 3.6e-13 81.6 297 29.0
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.6e-13 81.6 282 30.1
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 4.6e-13 81.3 438 26.3
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 4.6e-13 81.3 260 30.4
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 4.6e-13 81.3 308 29.5
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 6.1e-13 80.9 430 28.4
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 6.1e-13 80.9 319 29.5
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 7.9e-13 80.5 360 30.8
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 7.9e-13 80.5 342 28.4
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 7.9e-13 80.5 342 28.1
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 7.9e-13 80.5 313 31.3
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.0e-12 80.1 160 40.0
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 1.0e-12 80.1 281 32.4
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 1.0e-12 80.1 142 39.4
SMO137G0129 Selaginella moellendorffii HOM05D024364 ORTHO05D021332 1.4e-12 79.7 274 31.4
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 3.0e-12 78.6 313 28.1
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 3.0e-12 78.6 323 27.9
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 3.9e-12 78.2 258 33.7
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 3.9e-12 78.2 297 31.0
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 5.1e-12 77.8 321 31.2
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 6.7e-12 77.4 269 30.5
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 1.1e-11 76.6 295 31.5
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.1e-11 76.6 355 27.0
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 2.0e-11 75.9 317 28.4
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 2.0e-11 75.9 182 35.2
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 2.0e-11 75.9 563 25.8
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 3.3e-11 75.1 314 29.6
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 3.3e-11 75.1 292 30.5
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 4.3e-11 74.7 142 38.0
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 5.7e-11 74.3 256 33.6
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 7.4e-11 73.9 300 28.7
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 7.4e-11 73.9 283 30.7
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 1.3e-10 73.2 253 29.6
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 1.7e-10 72.8 324 29.9
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.2e-10 72.4 202 31.7
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 3.7e-10 71.6 267 29.2
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 3.7e-10 71.6 268 31.7
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 4.8e-10 71.2 256 29.7
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 4.8e-10 71.2 292 30.5
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 4.8e-10 71.2 273 27.8
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 4.8e-10 71.2 278 30.2
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 6.3e-10 70.9 282 29.8
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 8.2e-10 70.5 345 27.2
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.1e-09 70.1 352 26.7
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.1e-09 70.1 130 36.9
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.1e-09 70.1 432 26.4
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 1.4e-09 69.7 262 30.5
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 1.8e-09 69.3 140 40.0
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 4.1e-09 68.2 329 29.8
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 4.1e-09 68.2 130 37.7
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 5.3e-09 67.8 322 27.6
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 5.3e-09 67.8 227 31.3
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 6.9e-09 67.4 320 29.7
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 6.9e-09 67.4 144 34.0
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 6.9e-09 67.4 135 36.3
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 9.1e-09 67.0 261 29.1
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 9.1e-09 67.0 278 28.1
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.2e-08 66.6 250 30.0
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 2.0e-08 65.9 145 36.6
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 2.6e-08 65.5 129 39.5
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 2.6e-08 65.5 285 26.7
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 3.4e-08 65.1 289 28.0
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 1.3e-07 63.2 363 27.3
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 1.3e-07 63.2 128 35.9
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 1.7e-07 62.8 138 37.0
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 2.2e-07 62.4 128 35.9
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 2.2e-07 62.4 171 31.0
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 2.2e-07 62.4 143 35.0
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 2.9e-07 62.0 145 34.5
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 3.8e-07 61.6 128 35.9
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 3.8e-07 61.6 128 35.9
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 3.8e-07 61.6 156 35.3
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 3.8e-07 61.6 307 28.0
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 8.5e-07 60.5 314 27.7
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 1.1e-06 60.1 145 33.8
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 1.1e-06 60.1 299 25.4
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 1.4e-06 59.7 171 31.0
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 1.9e-06 59.3 287 27.2
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 1.9e-06 59.3 239 30.1
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 1.9e-06 59.3 129 35.7
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 2.5e-06 58.9 129 35.7
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 3.2e-06 58.5 290 26.9
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 3.2e-06 58.5 290 26.9
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.2e-06 58.5 190 30.0
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 3.2e-06 58.5 158 34.2
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 4.2e-06 58.2 129 34.1
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 5.5e-06 57.8 281 27.0
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 5.5e-06 57.8 143 34.3
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 7.2e-06 57.4 153 36.6


User provided reference genes

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