Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 1.1e-107 393.3 202 100.0
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.2e-61 240.4 163 72.4
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 6.2e-61 238.0 163 72.4
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 8.0e-61 237.7 164 71.3
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 8.0e-61 237.7 163 69.9
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.1e-60 237.3 168 72.0
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 1.4e-60 236.9 163 71.8
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.8e-60 236.5 163 70.6
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 4.0e-60 235.3 163 70.6
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 5.2e-60 235.0 163 71.8
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.5e-59 233.4 164 68.9
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 2.0e-59 233.0 163 69.9
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 5.8e-59 231.5 163 71.8
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 5.8e-59 231.5 161 71.4
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 7.5e-59 231.1 163 70.6
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 7.5e-59 231.1 163 71.2
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 9.8e-59 230.7 169 67.5
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 9.8e-59 230.7 163 71.8
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 9.8e-59 230.7 163 69.3
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.3e-58 230.3 160 72.5
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.3e-58 230.3 161 72.0
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.2e-58 229.6 168 67.3
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 2.2e-58 229.6 164 70.7
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 2.2e-58 229.6 163 69.9
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 2.2e-58 229.6 163 68.1
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.2e-58 229.6 163 69.9
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 2.9e-58 229.2 190 60.0
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 2.9e-58 229.2 163 69.9
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 2.9e-58 229.2 163 70.6
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 3.7e-58 228.8 163 68.7
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 4.9e-58 228.4 167 68.3
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 8.3e-58 227.6 161 70.2
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 8.3e-58 227.6 163 69.3
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 8.3e-58 227.6 163 68.1
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 1.1e-57 227.3 163 68.7
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.1e-57 227.3 160 71.2
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 1.1e-57 227.3 163 68.1
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.4e-57 226.9 173 65.9
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 1.4e-57 226.9 164 69.5
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 2.4e-57 226.1 161 69.6
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 3.2e-57 225.7 164 68.3
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 3.2e-57 225.7 168 64.9
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 4.1e-57 225.3 163 68.1
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 5.4e-57 224.9 163 69.3
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 5.4e-57 224.9 161 68.9
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 9.2e-57 224.2 173 64.7
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 9.2e-57 224.2 160 70.0
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.2e-56 223.8 160 70.0
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.2e-56 223.8 160 70.0
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.6e-56 223.4 160 70.6
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.6e-56 223.4 163 66.9
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 2.7e-56 222.6 168 66.7
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 2.7e-56 222.6 162 69.1
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 3.5e-56 222.2 161 68.9
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 4.6e-56 221.9 163 68.1
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 4.6e-56 221.9 160 68.1
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 6.0e-56 221.5 161 70.2
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 6.0e-56 221.5 163 66.3
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 6.0e-56 221.5 163 68.7
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 6.0e-56 221.5 163 66.9
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 6.0e-56 221.5 161 68.3
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 7.8e-56 221.1 163 69.3
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 7.8e-56 221.1 160 69.4
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 7.8e-56 221.1 163 68.7
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.0e-55 220.7 161 68.3
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.0e-55 220.7 163 66.9
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.3e-55 220.3 163 68.1
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 3.0e-55 219.2 163 66.3
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.0e-55 219.2 161 67.7
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.9e-55 218.8 162 65.4
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 3.9e-55 218.8 163 65.0
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 3.9e-55 218.8 161 69.6
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 5.1e-55 218.4 161 68.3
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 6.6e-55 218.0 161 68.9
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 6.6e-55 218.0 164 67.7
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 6.6e-55 218.0 161 67.7
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 6.6e-55 218.0 163 68.1
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 6.6e-55 218.0 179 60.3
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 8.6e-55 217.6 166 65.1
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 8.6e-55 217.6 164 68.3
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 1.1e-54 217.2 166 64.5
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.1e-54 217.2 161 68.3
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.1e-54 217.2 161 67.7
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.1e-54 217.2 162 69.1
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.5e-54 216.9 163 67.5
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 1.5e-54 216.9 161 67.7
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.5e-54 216.9 167 63.5
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 1.9e-54 216.5 161 68.9
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 2.5e-54 216.1 163 66.3
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 2.5e-54 216.1 161 67.1
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 4.3e-54 215.3 161 67.1
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 4.3e-54 215.3 161 66.5
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 5.6e-54 214.9 164 65.9
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 1.6e-53 213.4 160 66.9
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 2.8e-53 212.6 172 63.4
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 4.7e-53 211.8 163 63.8
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 4.7e-53 211.8 163 64.4
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 6.2e-53 211.5 161 65.8
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.1e-52 210.7 171 64.3
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.1e-52 210.7 166 66.3
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.8e-52 209.9 164 65.9
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 6.8e-52 208.0 162 64.8
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 8.9e-52 207.6 168 61.9
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 8.9e-52 207.6 168 61.9
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 8.9e-52 207.6 168 61.9
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 2.0e-51 206.5 168 61.9
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 2.6e-51 206.1 168 61.3
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 3.4e-51 205.7 168 60.7
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.3e-50 203.8 161 63.4
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 1.7e-50 203.4 161 62.7
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 1.7e-50 203.4 162 64.8
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 2.2e-50 203.0 161 62.7
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 2.2e-50 203.0 161 62.7
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 2.2e-50 203.0 161 62.7
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 6.4e-50 201.4 171 62.6
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 4.1e-49 198.7 162 64.2
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 3.1e-44 182.6 136 68.4
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.0e-43 179.9 146 62.3
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 2.0e-43 179.9 163 57.7
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.0e-39 167.5 127 64.6
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 3.8e-34 149.1 152 50.0
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 1.9e-33 146.7 162 53.1
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 1.6e-32 143.7 120 65.0
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 1.6e-24 117.1 100 61.0
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 2.7e-24 116.3 145 46.9
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.7e-24 116.3 105 58.1
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 1.1e-12 77.8 162 35.2
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.0e-10 71.2 48 66.7
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 2.9e-10 69.7 48 64.6


User provided reference genes

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