Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21440 Sequoiadendron giganteum HOM05D002989 ORTHO05D003218 6.8e-184 647.1 312 100.0
ATR0665G490 Amborella trichopoda HOM05D002989 ORTHO05D003218 3.2e-56 223.0 224 54.5
TAR365G0943 Trochodendron aralioides HOM05D002989 ORTHO05D003218 1.0e-54 218.0 226 53.1
Ciclev10018605m.g Citrus clementina HOM05D002989 ORTHO05D003218 3.0e-54 216.5 239 48.5
MSTRG.18266 Avicennia marina HOM05D002989 ORTHO05D003218 3.9e-54 216.1 231 51.9
Thecc.01G272000 Theobroma cacao HOM05D002989 ORTHO05D003218 1.1e-53 214.5 239 48.1
Actinidia24922 Actinidia chinensis HOM05D001150 ORTHO05D003218 4.3e-53 212.6 223 48.9
Oeu025764.3 Olea europaea HOM05D002989 ORTHO05D003218 7.3e-53 211.8 289 45.7
GSVIVG01003117001 Vitis vinifera HOM05D002989 ORTHO05D003218 1.2e-52 211.1 223 48.4
Atru.chr5.1517 Acer truncatum HOM05D002989 ORTHO05D003218 2.1e-52 210.3 210 52.9
SGA_v2.0_scaffold1G00532 Striga asiatica HOM05D002989 ORTHO05D003218 3.6e-52 209.5 224 50.9
Dinv32887 Davidia involucrata HOM05D002989 ORTHO05D003218 4.7e-52 209.1 243 47.7
Rhsim01G0272200 Rhododendron simsii HOM05D002989 ORTHO05D003218 6.2e-52 208.8 224 47.3
ECA247G3236 Erigeron canadensis HOM05D002989 ORTHO05D003218 1.4e-51 207.6 239 46.4
Lalb_Chr21g0306351 Lupinus albus HOM05D002989 ORTHO05D003218 1.4e-51 207.6 223 48.4
Migut.D00359 Erythranthe guttata HOM05D002989 ORTHO05D003218 3.1e-51 206.5 226 49.1
Ca_09731_v3 Cicer arietinum L. HOM05D002989 ORTHO05D003218 6.8e-51 205.3 223 47.5
Nn1g02454 Nelumbo nucifera HOM05D002989 ORTHO05D003218 8.9e-51 204.9 250 46.8
CsaV3_2G013890 Cucumis sativus L. HOM05D002989 ORTHO05D003218 2.0e-50 203.8 227 48.0
Manes.05G081600 Manihot esculenta HOM05D002989 ORTHO05D003218 2.6e-50 203.4 227 49.8
PGR044G1058 Punica granatum HOM05D002989 ORTHO05D003218 5.8e-50 202.2 223 50.2
Duzib211G0299 Durio zibethinus HOM05D002989 ORTHO05D003218 9.9e-50 201.4 239 46.0
FAN20G1777 Fragaria x ananassa HOM05D002989 ORTHO05D003218 9.9e-50 201.4 216 48.6
Gorai.004G056100 Gossypium raimondii HOM05D002989 ORTHO05D003218 9.9e-50 201.4 265 44.2
RcHm_v2.0_Chr6g0290051 Rosa chinensis HOM05D002989 ORTHO05D003218 1.3e-49 201.1 216 49.1
AUR62011976 Chenopodium quinoa HOM05D002989 ORTHO05D003218 1.7e-49 200.7 215 51.2
Gohir.D08G055500 Gossypium hirsutum HOM05D002989 ORTHO05D003218 1.7e-49 200.7 265 44.2
PSO832G1612 Papaver somniferum HOM05D002989 ORTHO05D003218 1.7e-49 200.7 230 46.5
Lj5g0006345 Lotus japonicus HOM05D002989 ORTHO05D003218 2.2e-49 200.3 229 46.3
Lsat_1_v5_gn_9_7440 Lactuca sativa HOM05D002989 ORTHO05D003218 2.9e-49 199.9 226 46.0
QL12p042063 Quercus lobata HOM05D002989 ORTHO05D003218 2.9e-49 199.9 223 48.4
FvH4_2g23010 Fragaria vesca HOM05D002989 ORTHO05D003218 3.8e-49 199.5 216 48.1
Medtr1g071370 Medicago truncatula HOM05D002989 ORTHO05D003218 3.8e-49 199.5 223 46.6
Prupe.8G235000 Prunus persica HOM05D002989 ORTHO05D003218 3.8e-49 199.5 211 50.7
TWI12G0259 Tripterygium wilfordii HOM05D002989 ORTHO05D003218 3.8e-49 199.5 224 47.3
Ah.11g050240 Amaranthus hybridus HOM05D002989 ORTHO05D003218 4.9e-49 199.1 212 52.4
Nitab4.5_0000459g0030 Nicotiana tabacum HOM05D002989 ORTHO05D003218 6.4e-49 198.7 249 46.2
Psat6g059080 Pisum sativum HOM05D002989 ORTHO05D003218 6.4e-49 198.7 223 46.6
EL10Ac5g10497 Beta vulgaris HOM05D002989 ORTHO05D003218 8.4e-49 198.4 244 46.3
ClCG07G000490 Citrullus lanatus HOM05D002989 ORTHO05D003218 8.4e-49 198.4 227 47.6
Phvul.007G174700 Phaseolus vulgaris HOM05D002989 ORTHO05D003218 8.4e-49 198.4 229 46.7
Potri.005G214650 Populus trichocarpa HOM05D002989 ORTHO05D003218 8.4e-49 198.4 224 46.4
Eucgr.K03327 Eucalyptus grandis HOM05D002989 ORTHO05D003218 1.4e-48 197.6 223 51.6
MD03G1258500 Malus domestica HOM05D002989 ORTHO05D003218 1.4e-48 197.6 217 49.8
arahy.Tifrunner.gnm1.ann1.T1HKRS Arachis hypogaea HOM05D002989 ORTHO05D003218 2.4e-48 196.8 220 47.3
Gohir.A08G045205 Gossypium hirsutum HOM05D002989 ORTHO05D003218 2.4e-48 196.8 243 45.7
HanXRQChr10g0281961 Helianthus annuus HOM05D002989 ORTHO05D003218 3.2e-48 196.4 232 47.0
Sopen09g027400 Solanum pennellii HOM05D002989 ORTHO05D003218 3.2e-48 196.4 231 45.5
CAN.G380.7 Capsicum annuum HOM05D002989 ORTHO05D003218 5.4e-48 195.7 232 44.8
Sc17g0001200 Simmondsia chinensis HOM05D002989 ORTHO05D003218 5.4e-48 195.7 207 48.3
CDE05G0153 Ceratophyllum demersum HOM05D002989 ORTHO05D003218 7.1e-48 195.3 229 48.0
MELO3C014325.2 Cucumis melo HOM05D002989 ORTHO05D003218 7.1e-48 195.3 230 47.0
Sed0003144 Sechium edule HOM05D002989 ORTHO05D003218 9.2e-48 194.9 229 47.6
Solyc09g065650.3 Solanum lycopersicum HOM05D002989 ORTHO05D003218 9.2e-48 194.9 232 45.7
Lj2C1165G7 Lonicera japonica HOM05D002989 ORTHO05D003218 1.2e-47 194.5 223 48.0
Cc01_g19030 Coffea canephora HOM05D002989 ORTHO05D003218 1.6e-47 194.1 223 47.1
arahy.Tifrunner.gnm1.ann1.V0L3RT Arachis hypogaea HOM05D002989 ORTHO05D003218 4.6e-47 192.6 220 46.4
VMungo0720G0909 Vigna mungo HOM05D000002 ORTHO05D000001 4.6e-47 192.6 223 45.3
Cfa006196 Carpinus fangiana HOM05D002989 ORTHO05D003218 7.8e-47 191.8 241 43.6
Os11g0586100 Oryza sativa ssp. japonica HOM05D002989 ORTHO05D003218 7.8e-47 191.8 224 47.3
Peaxi162Scf00230g00019 Petunia axillaris HOM05D002989 ORTHO05D003218 1.3e-46 191.0 231 44.6
Haze_04647 Corylus avellana HOM05D002989 ORTHO05D003218 3.0e-46 189.9 252 42.5
CANSAT25G2944 Cannabis sativa HOM05D002989 ORTHO05D003218 3.9e-46 189.5 208 48.6
Glyma.02G144500 Glycine max HOM05D002989 ORTHO05D003218 5.1e-46 189.1 234 44.0
C04p29910 Brassica napus HOM05D002989 ORTHO05D003218 2.5e-45 186.8 223 46.2
Thhalv10005760m.g Eutrema salsugineum HOM05D002989 ORTHO05D003218 3.3e-45 186.4 224 45.1
Sp5g00200 Schrenkiella parvula HOM05D002989 ORTHO05D003218 3.3e-45 186.4 223 46.6
A04p00100 Brassica napus HOM05D002989 ORTHO05D003218 4.3e-45 186.0 223 46.2
Carub.0005s2998 Capsella rubella HOM05D002989 ORTHO05D003218 7.3e-45 185.3 223 46.2
BcaB02g08065 Brassica carinata HOM05D002989 ORTHO05D003218 2.1e-44 183.7 223 45.7
AL5G46190 Arabidopsis lyrata HOM05D002989 ORTHO05D003218 3.6e-44 183.0 224 46.9
HPP92_020348 Vanilla planifolia HOM05D002989 ORTHO05D003218 3.6e-44 183.0 233 43.3
CARHR291630 Cardamine hirsuta HOM05D002989 ORTHO05D003218 5.2e-43 179.1 223 45.7
BraA04t15730Z Brassica rapa HOM05D002989 ORTHO05D003218 6.9e-43 178.7 231 44.6
COL.COLO4_09194 Corchorus olitorius HOM05D002989 ORTHO05D003218 6.9e-43 178.7 277 39.7
BolC4t24522H Brassica oleracea HOM05D002989 ORTHO05D003218 3.4e-42 176.4 231 44.2
AT3G63340 Arabidopsis thaliana HOM05D002989 ORTHO05D003218 1.7e-41 174.1 223 44.4
Pp3c16_17820 Physcomitrium patens HOM05D002989 ORTHO05D003218 2.2e-41 173.7 223 45.3
Sabra05G0164000 Salix brachista HOM05D002989 ORTHO05D003218 4.2e-40 169.5 192 48.4
Mapoly0019s0132 Marchantia polymorpha HOM05D002989 ORTHO05D003218 1.1e-37 161.4 229 41.5
AagrBONN_evm.TU.Sc2ySwM_117.2433 Anthoceros agrestis HOM05D002989 ORTHO05D003218 2.5e-37 160.2 224 40.6
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 5.6e-37 159.1 333 32.7
AUR62032285 Chenopodium quinoa HOM05D002989 ORTHO05D003218 1.3e-36 157.9 215 44.2
FAN24G2837 Fragaria x ananassa HOM05D002989 ORTHO05D003218 2.1e-36 157.1 216 41.7
SalBow4G0275 Salvia bowleyana HOM05D002989 ORTHO05D003218 4.8e-36 156.0 142 52.8
FAN27G2040 Fragaria x ananassa HOM05D002989 ORTHO05D003218 2.4e-35 153.7 216 41.7
Nn1g00098 Nelumbo nucifera HOM05D002989 ORTHO05D003218 5.8e-34 149.1 105 66.7
FAN15G0470 Fragaria x ananassa HOM05D002989 ORTHO05D003218 1.7e-33 147.5 216 41.7
Aa31LG10G17180 Aethionema arabicum HOM05D002989 ORTHO05D003218 3.8e-33 146.4 204 42.6
Hund02863 Selenicereus undatus HOM05D002989 ORTHO05D003218 1.9e-32 144.1 243 38.7
TPR.G25694 Trifolium pratense HOM05D002989 ORTHO05D003218 9.3e-32 141.7 124 50.8
SMO238G0016 Selaginella moellendorffii HOM05D002989 ORTHO05D003218 1.8e-30 137.5 215 37.2
unitig_0.g139 Utricularia gibba HOM05D002989 ORTHO05D003218 2.3e-30 137.1 230 38.7
Cpa.g.sc52.114 Carica papaya HOM05D002989 ORTHO05D003218 6.7e-30 135.6 173 43.9
CiPaw.08G108900 Carya illinoinensis HOM05D002989 ORTHO05D003218 4.3e-29 132.9 206 39.8
Nitab4.5_0003775g0010 Nicotiana tabacum HOM05D002989 ORTHO05D003218 4.8e-28 129.4 185 44.3
CBR_g2972 Chara braunii HOM05D002989 ORTHO05D003218 6.7e-22 109.0 171 36.3
MD00G1147700 Malus domestica HOM05D002989 ORTHO05D003218 2.5e-21 107.1 173 39.9
Rhsim01G0068300 Rhododendron simsii HOM05D002989 ORTHO05D003218 2.3e-14 84.0 164 34.1
QL05p073824 Quercus lobata HOM05D002989 ORTHO05D003218 1.2e-10 71.6 130 33.1
PRCOL_00004918 Prasinoderma coloniale HOM05D002989 ORTHO05D003218 7.6e-10 68.9 135 32.6
Cre01.g008150 Chlamydomonas reinhardtii HOM05D002989 ORTHO05D003218 8.5e-09 65.5 53 50.9
SEGI_00631 Sequoiadendron giganteum HOM05D000154 ORTHO05D000092 1.2e-07 61.6 31 77.4


User provided reference genes

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