Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 0.0e+00 1692.6 1007 100.0
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 0.0e+00 1407.5 993 89.1
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 1.0e-79 302.8 903 34.2
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 1.5e-70 272.3 634 36.8
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 2.2e-66 258.5 889 33.1
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 4.1e-65 254.2 585 38.5
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 2.1e-64 251.9 889 32.3
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.3e-63 249.2 985 33.0
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 3.6e-61 241.1 829 32.7
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 1.8e-60 238.8 832 32.0
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 9.9e-59 233.0 774 30.6
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 1.1e-57 229.6 769 31.6
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 5.4e-57 227.3 769 31.5
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 3.9e-55 221.1 845 30.4
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 9.6e-54 216.5 727 32.5
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 4.0e-52 211.1 912 30.4
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 1.3e-50 206.1 775 31.6
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 6.4e-50 203.8 803 32.5
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.4e-49 202.6 728 31.5
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 5.4e-49 200.7 640 33.6
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 1.2e-48 199.5 1006 30.3
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 2.1e-48 198.7 761 32.2
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 3.5e-48 198.0 803 31.8
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.7e-47 195.7 750 32.5
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.7e-47 195.7 943 31.5
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.7e-47 195.7 765 33.3
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 3.0e-47 194.9 826 30.9
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 3.0e-47 194.9 950 33.5
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.0e-47 194.9 945 30.5
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 2.5e-46 191.8 828 30.2
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 4.3e-46 191.0 781 30.5
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 7.3e-46 190.3 949 29.2
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 7.3e-46 190.3 804 29.7
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 7.3e-46 190.3 740 30.1
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 9.6e-46 189.9 747 31.5
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 3.6e-45 188.0 592 32.4
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 8.1e-45 186.8 704 30.7
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.8e-44 185.7 945 30.1
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.2e-43 183.0 775 31.4
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 1.5e-43 182.6 897 34.3
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 1.5e-43 182.6 969 27.2
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 2.6e-43 181.8 827 28.7
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 4.5e-43 181.0 782 31.1
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 4.5e-43 181.0 977 29.8
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 1.3e-42 179.5 569 35.0
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 1.7e-42 179.1 784 31.8
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 6.4e-42 177.2 945 33.0
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 6.4e-42 177.2 793 30.1
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 1.4e-41 176.0 792 29.4
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.9e-41 175.6 1043 29.3
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 3.2e-41 174.9 799 30.3
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 4.2e-41 174.5 934 34.7
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 5.4e-41 174.1 937 29.2
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 5.4e-41 174.1 921 32.8
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 5.4e-41 174.1 814 30.6
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 1.8e-39 169.1 954 30.4
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 3.0e-39 168.3 743 30.6
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 1.5e-38 166.0 1018 27.6
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 3.3e-38 164.9 748 30.6
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 1.6e-37 162.5 1047 28.7
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.1e-36 159.8 788 29.6
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 1.1e-36 159.8 944 28.8
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 1.8e-36 159.1 971 28.3
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 3.1e-36 158.3 591 31.3
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 4.5e-35 154.5 766 29.9
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 5.8e-35 154.1 937 27.4
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 1.0e-34 153.3 976 31.7
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 1.7e-34 152.5 932 34.7
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.7e-34 152.5 1024 27.6
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 1.7e-34 152.5 927 29.0
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 3.8e-34 151.4 755 29.5
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 6.5e-34 150.6 995 26.9
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 1.1e-33 149.8 777 27.9
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 1.6e-32 146.0 989 28.8
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 3.0e-31 141.7 714 28.6
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 3.9e-31 141.4 1063 28.5
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 2.5e-30 138.7 577 30.7
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 5.7e-30 137.5 411 36.3
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 1.6e-29 136.0 846 29.2
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.8e-29 135.2 929 28.0
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 3.7e-29 134.8 766 29.0
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 2.0e-27 129.0 559 31.7
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.1e-25 123.2 582 31.3
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 1.4e-25 122.9 483 32.1
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 1.9e-25 122.5 469 33.3
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.5e-25 122.1 758 28.5
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 3.2e-25 121.7 790 28.2
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 2.1e-24 119.0 918 27.7
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 3.3e-22 111.7 813 26.7
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 4.5e-19 101.3 784 26.9
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 1.0e-18 100.1 784 24.6
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 1.2e-16 93.2 858 29.0
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 3.0e-15 88.6 792 26.9
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 3.9e-15 88.2 515 29.5
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 3.3e-14 85.1 974 25.2
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 2.2e-13 82.4 384 30.7
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 6.9e-12 77.4 278 34.2
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 4.2e-09 68.2 186 33.3
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 5.5e-09 67.8 520 27.5
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.6e-08 66.2 759 25.7
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 1.6e-08 66.2 759 25.7
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 1.6e-08 66.2 174 33.9
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 2.7e-08 65.5 138 36.2
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 6.1e-08 64.3 805 25.6
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 3.0e-07 62.0 650 27.4
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 5.1e-07 61.2 521 28.0
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 5.1e-07 61.2 250 29.6
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 5.7e-06 57.8 457 26.0


User provided reference genes

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