Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21178 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 3.0e-133 478.4 226 100.0
SEGI_33304 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 2.0e-105 386.0 201 91.5
Mapoly0001s0419 Marchantia polymorpha HOM05D010140 ORTHO05D011490 3.8e-59 232.3 222 52.7
SEGI_15139 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 2.2e-38 163.3 219 42.0
SEGI_17858 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 9.1e-37 157.9 199 42.7
SEGI_18723 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 2.6e-36 156.4 219 43.8
SEGI_25741 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 4.5e-36 155.6 198 44.9
SEGI_41161 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 4.5e-36 155.6 211 43.1
SEGI_24454 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 5.9e-36 155.2 216 41.2
SEGI_19755 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 6.5e-35 151.8 209 42.1
SEGI_17565 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 3.2e-34 149.4 199 40.7
SEGI_17410 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 3.6e-33 146.0 198 43.9
SMO364G0124 Selaginella moellendorffii HOM05D010140 ORTHO05D011490 3.9e-32 142.5 231 36.8
SMO147G0052 Selaginella moellendorffii HOM05D010140 ORTHO05D011490 3.3e-31 139.4 218 37.6
Cre02.g095750 Chlamydomonas reinhardtii HOM05D010140 ORTHO05D011490 1.8e-24 117.1 178 38.2
Pp3c3_13640 Physcomitrium patens HOM05D010140 ORTHO05D011490 1.7e-22 110.5 136 41.2
SMO197G0039 Selaginella moellendorffii HOM05D010140 ORTHO05D011490 3.6e-17 92.8 139 35.3
SMO364G0147 Selaginella moellendorffii HOM05D010140 ORTHO05D011490 1.4e-13 80.9 219 26.9
SEGI_05285 Sequoiadendron giganteum HOM05D010140 ORTHO05D011490 5.9e-12 75.5 111 38.7
VMungo1127G0209 Vigna mungo HOM05D002878 ORTHO05D003649 2.2e-11 73.6 162 34.0
Pp3c3_7450 Physcomitrium patens HOM05D002878 ORTHO05D011490 1.1e-10 71.2 110 40.0
Mapoly0028s0084 Marchantia polymorpha HOM05D002878 ORTHO05D003649 1.5e-10 70.9 156 31.4
Lj3g0027459 Lotus japonicus HOM05D002878 ORTHO05D003649 3.2e-10 69.7 151 33.8
SEGI_30203 Sequoiadendron giganteum HOM05D002878 ORTHO05D011490 3.2e-10 69.7 114 38.6
AagrBONN_evm.TU.Sc2ySwM_117.3274 Anthoceros agrestis HOM05D002878 ORTHO05D011490 4.2e-10 69.3 158 31.0
HPP92_010971 Vanilla planifolia HOM05D002878 ORTHO05D003649 5.5e-10 68.9 166 33.1
Lalb_Chr01g0008141 Lupinus albus HOM05D002878 ORTHO05D003649 2.7e-09 66.6 149 30.9
Psat0s1281g0080 Pisum sativum HOM05D002878 ORTHO05D003649 1.0e-08 64.7 159 30.8
Actinidia16481 Actinidia chinensis HOM05D002878 ORTHO05D003649 1.4e-08 64.3 160 31.2
CSS0031288 Camellia sinensis var. sinensis HOM05D002878 ORTHO05D003649 1.4e-08 64.3 160 31.2
Eucgr.I00922 Eucalyptus grandis HOM05D002878 ORTHO05D003649 1.4e-08 64.3 160 33.1
Os04g0448900 Oryza sativa ssp. japonica HOM05D002878 ORTHO05D003649 1.4e-08 64.3 159 32.1
PSO170G1040 Papaver somniferum HOM05D002878 ORTHO05D003649 1.8e-08 63.9 160 31.2
PSO210G3686 Papaver somniferum HOM05D002878 ORTHO05D003649 1.8e-08 63.9 160 31.2
ClCG02G012500 Citrullus lanatus HOM05D002878 ORTHO05D003649 3.0e-08 63.2 159 30.2
Ca_22162_v3 Cicer arietinum L. HOM05D002878 ORTHO05D003649 4.0e-08 62.8 160 31.9
MBI03_g13473_MAGBIO Magnolia biondii HOM05D002878 ORTHO05D003649 4.0e-08 62.8 160 31.2
MD02G1172400 Malus domestica HOM05D002878 ORTHO05D003649 4.0e-08 62.8 160 30.6
TWI09G0920 Tripterygium wilfordii HOM05D002878 ORTHO05D003649 4.0e-08 62.8 160 31.2
DCAR_025735 Daucus carota HOM05D002878 ORTHO05D003649 5.2e-08 62.4 160 30.6
Medtr4g022850 Medicago truncatula HOM05D002878 ORTHO05D003649 5.2e-08 62.4 109 35.8
MELO3C020872.2 Cucumis melo HOM05D002878 ORTHO05D003649 6.8e-08 62.0 160 30.0
CsaV3_2G016630 Cucumis sativus L. HOM05D002878 ORTHO05D003649 6.8e-08 62.0 160 30.0
Glyma.11G055700 Glycine max HOM05D002878 ORTHO05D003649 6.8e-08 62.0 160 31.2
Lsat_1_v5_gn_3_90761 Lactuca sativa HOM05D002878 ORTHO05D003649 6.8e-08 62.0 160 33.1
Rhsim10G0117200 Rhododendron simsii HOM05D002878 ORTHO05D003649 6.8e-08 62.0 160 31.2
HanXRQChr12g0378831 Helianthus annuus HOM05D002878 ORTHO05D003649 8.8e-08 61.6 160 31.9
TPR.G19064 Trifolium pratense HOM05D002878 ORTHO05D003649 8.8e-08 61.6 159 30.8
Aa31LG1G15560 Aethionema arabicum HOM05D002878 ORTHO05D003649 1.2e-07 61.2 159 30.8
CiPaw.01G017900 Carya illinoinensis HOM05D002878 ORTHO05D003649 1.2e-07 61.2 160 32.5
CDE10G0029 Ceratophyllum demersum HOM05D002878 ORTHO05D003649 1.2e-07 61.2 160 30.0
Sed0023782 Sechium edule HOM05D002878 ORTHO05D003649 1.2e-07 61.2 159 30.2
Duzib187G0827 Durio zibethinus HOM05D002878 ORTHO05D003649 1.5e-07 60.8 160 31.2
TAR628G1519 Trochodendron aralioides HOM05D002878 ORTHO05D003649 1.5e-07 60.8 129 34.9
Zm00001eb423570 Zea mays HOM05D002878 ORTHO05D003649 1.5e-07 60.8 160 30.6
MSTRG.2882 Avicennia marina HOM05D002878 ORTHO05D003649 2.6e-07 60.1 160 31.2
CANSAT01G1312 Cannabis sativa HOM05D002878 ORTHO05D003649 2.6e-07 60.1 159 30.2
Manes.13G124100 Manihot esculenta HOM05D002878 ORTHO05D003649 2.6e-07 60.1 159 28.9
Potri.005G138400 Populus trichocarpa HOM05D002878 ORTHO05D003649 2.6e-07 60.1 160 31.2
Zm00001eb081460 Zea mays HOM05D002878 ORTHO05D003649 2.6e-07 60.1 159 30.2
Nn5g30293 Nelumbo nucifera HOM05D002878 ORTHO05D003649 3.4e-07 59.7 160 31.2
Lalb_Chr16g0378561 Lupinus albus HOM05D002878 ORTHO05D003649 4.4e-07 59.3 160 30.0
MD15G1284500 Malus domestica HOM05D002878 ORTHO05D003649 5.7e-07 58.9 160 29.4
Phvul.003G243800 Phaseolus vulgaris HOM05D002878 ORTHO05D003649 5.7e-07 58.9 160 30.6
PGSC0003DMG400004020 Solanum tuberosum HOM05D002878 ORTHO05D003649 5.7e-07 58.9 160 31.9
Thecc.01G056500 Theobroma cacao HOM05D002878 ORTHO05D003649 5.7e-07 58.9 160 30.0
Atru.chr3.325 Acer truncatum HOM05D002878 ORTHO05D003649 7.5e-07 58.5 160 30.6
Ah.03g145010 Amaranthus hybridus HOM05D002878 ORTHO05D003649 7.5e-07 58.5 160 30.6
Eucgr.I00923 Eucalyptus grandis HOM05D002878 ORTHO05D003649 7.5e-07 58.5 132 34.1
Thhalv10003769m.g Eutrema salsugineum HOM05D002878 ORTHO05D003649 7.5e-07 58.5 162 30.9
Nitab4.5_0002016g0120 Nicotiana tabacum HOM05D002878 ORTHO05D003649 7.5e-07 58.5 160 31.2
vmacro05340 Vaccinium macrocarpon HOM05D002878 ORTHO05D003649 7.5e-07 58.5 129 33.3
arahy.Tifrunner.gnm1.ann1.5ITW1B Arachis hypogaea HOM05D002878 ORTHO05D003649 9.8e-07 58.2 160 30.6
arahy.Tifrunner.gnm1.ann1.H1IQ00 Arachis hypogaea HOM05D002878 ORTHO05D003649 9.8e-07 58.2 160 30.6
VMungo0251G0371 Vigna mungo HOM05D002878 ORTHO05D003649 9.8e-07 58.2 160 30.0
CAN.G660.9 Capsicum annuum HOM05D002878 ORTHO05D003649 1.3e-06 57.8 128 32.8
Glyma.17G174500 Glycine max HOM05D002878 ORTHO05D003649 1.3e-06 57.8 160 30.6
Sabra07G0039100 Salix brachista HOM05D002878 ORTHO05D003649 1.3e-06 57.8 160 29.4
VMungo1215G2613 Vigna mungo HOM05D002878 ORTHO05D003649 1.3e-06 57.8 160 29.4
MD07G1003000 Malus domestica HOM05D002878 ORTHO05D003649 1.7e-06 57.4 151 29.1
GSVIVG01022128001 Vitis vinifera HOM05D002878 ORTHO05D003649 1.7e-06 57.4 160 31.2
AUR62001926 Chenopodium quinoa HOM05D002878 ORTHO05D003649 2.2e-06 57.0 133 32.3
ECA246G0578 Erigeron canadensis HOM05D002878 ORTHO05D003649 2.2e-06 57.0 128 32.0
Lalb_Chr00c02g0404101 Lupinus albus HOM05D002878 ORTHO05D003649 2.2e-06 57.0 160 28.8
Hund16322 Selenicereus undatus HOM05D002878 ORTHO05D003649 2.2e-06 57.0 122 35.2
arahy.Tifrunner.gnm1.ann1.A5JFP2 Arachis hypogaea HOM05D002878 ORTHO05D003649 2.8e-06 56.6 160 30.0
arahy.Tifrunner.gnm1.ann1.MHSG3V Arachis hypogaea HOM05D002878 ORTHO05D003649 2.8e-06 56.6 160 30.0
EL10Ac6g15742 Beta vulgaris HOM05D002878 ORTHO05D003649 2.8e-06 56.6 160 28.8
Lj2g0007356 Lotus japonicus HOM05D002878 ORTHO05D003649 2.8e-06 56.6 159 28.3
Lj4g0006017 Lotus japonicus HOM05D002878 ORTHO05D003649 2.8e-06 56.6 160 30.0
Aqoxy5G01226 Aquilegia oxysepala HOM05D002878 ORTHO05D003649 3.7e-06 56.2 159 28.3
Solyc02g090890.4 Solanum lycopersicum HOM05D002878 ORTHO05D003649 3.7e-06 56.2 160 31.9
AUR62003884 Chenopodium quinoa HOM05D002878 ORTHO05D003649 4.9e-06 55.8 128 32.0
DCAR_015695 Daucus carota HOM05D002878 ORTHO05D003649 4.9e-06 55.8 131 36.6
Phvul.002G018700 Phaseolus vulgaris HOM05D002878 ORTHO05D003649 4.9e-06 55.8 160 30.0
Duzib147G1525 Durio zibethinus HOM05D002878 ORTHO05D003649 8.3e-06 55.1 123 32.5


User provided reference genes

Program Settings