Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 3.8e-55 218.0 116 100.0
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 4.2e-54 214.5 115 99.1
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 1.0e-28 130.2 117 59.0
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 5.2e-28 127.9 110 55.5
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 1.5e-27 126.3 110 58.2
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 1.5e-27 126.3 110 56.4
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 1.5e-27 126.3 110 56.4
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 3.3e-27 125.2 111 56.8
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 3.3e-27 125.2 110 56.4
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 3.3e-27 125.2 110 55.5
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 3.3e-27 125.2 112 53.6
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 3.3e-27 125.2 110 56.4
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 4.4e-27 124.8 110 55.5
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 4.4e-27 124.8 110 55.5
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 5.7e-27 124.4 110 55.5
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 9.7e-27 123.6 107 55.1
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 1.3e-26 123.2 110 55.5
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 1.3e-26 123.2 110 55.5
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.7e-26 122.9 110 53.6
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.7e-26 122.9 109 55.0
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 2.2e-26 122.5 112 55.4
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 2.2e-26 122.5 110 55.5
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 2.2e-26 122.5 110 54.5
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 2.2e-26 122.5 109 54.1
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 2.8e-26 122.1 112 54.5
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 2.8e-26 122.1 112 55.4
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.8e-26 122.1 110 55.5
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 2.8e-26 122.1 110 55.5
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 3.7e-26 121.7 110 55.5
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 3.7e-26 121.7 110 53.6
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 4.8e-26 121.3 110 53.6
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 4.8e-26 121.3 110 52.7
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 4.8e-26 121.3 109 54.1
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 4.8e-26 121.3 110 54.5
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 6.3e-26 120.9 110 54.5
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 6.3e-26 120.9 110 54.5
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 6.3e-26 120.9 109 54.1
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 6.3e-26 120.9 110 52.7
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 8.2e-26 120.6 110 52.7
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 8.2e-26 120.6 110 53.6
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 8.2e-26 120.6 111 53.2
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 1.1e-25 120.2 110 52.7
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 1.4e-25 119.8 111 54.1
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.4e-25 119.0 110 53.6
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 3.1e-25 118.6 110 52.7
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 3.1e-25 118.6 110 52.7
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 4.1e-25 118.2 107 54.2
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 5.3e-25 117.9 110 51.8
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 5.3e-25 117.9 109 54.1
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 7.0e-25 117.5 110 51.8
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 9.1e-25 117.1 110 53.6
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 9.1e-25 117.1 109 52.3
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 9.1e-25 117.1 111 54.1
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 9.1e-25 117.1 110 51.8
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 9.1e-25 117.1 110 50.9
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 1.2e-24 116.7 112 51.8
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 1.2e-24 116.7 110 50.9
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 1.2e-24 116.7 112 50.9
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 1.6e-24 116.3 110 53.6
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 1.6e-24 116.3 110 52.7
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 1.6e-24 116.3 110 49.1
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.6e-24 116.3 109 54.1
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 2.0e-24 115.9 110 50.0
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 2.0e-24 115.9 110 51.8
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.0e-24 115.9 109 49.5
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 2.0e-24 115.9 109 52.3
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 2.6e-24 115.5 110 51.8
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 2.6e-24 115.5 110 51.8
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.6e-24 115.5 111 47.7
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.5e-24 115.2 111 48.6
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 4.5e-24 114.8 109 51.4
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 5.9e-24 114.4 107 54.2
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 7.7e-24 114.0 107 54.2
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 7.7e-24 114.0 107 54.2
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 7.7e-24 114.0 110 51.8
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 1.0e-23 113.6 107 53.3
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 1.0e-23 113.6 107 54.2
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.0e-23 113.6 111 47.7
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.0e-23 113.6 111 47.7
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 1.0e-23 113.6 111 49.5
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 1.0e-23 113.6 109 56.0
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 1.0e-23 113.6 109 56.0
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 1.0e-23 113.6 112 50.0
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 1.3e-23 113.2 109 50.5
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 1.3e-23 113.2 107 53.3
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 1.3e-23 113.2 110 50.0
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 2.2e-23 112.5 109 48.6
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 3.8e-23 111.7 112 48.2
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 3.8e-23 111.7 110 48.2
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 3.8e-23 111.7 109 49.5
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 5.0e-23 111.3 109 50.5
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 5.0e-23 111.3 110 49.1
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 5.0e-23 111.3 108 52.8
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 6.5e-23 110.9 108 50.9
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 6.5e-23 110.9 109 52.3
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 8.5e-23 110.5 110 50.9
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 1.5e-22 109.8 107 50.5
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 1.9e-22 109.4 109 48.6
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 3.2e-22 108.6 110 48.2
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 4.2e-22 108.2 110 49.1
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 7.2e-22 107.5 110 48.2
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 9.4e-22 107.1 110 47.3
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 1.2e-21 106.7 110 46.4
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 1.6e-21 106.3 110 46.4
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 2.1e-21 105.9 115 49.6
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 4.7e-21 104.8 110 46.4
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 8.0e-21 104.0 114 43.9
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 8.0e-21 104.0 110 46.4
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 8.0e-21 104.0 113 49.6
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 2.3e-20 102.4 130 45.4
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 4.0e-20 101.7 110 46.4
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 2.0e-19 99.4 110 43.6
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 9.7e-19 97.1 109 45.0
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 3.7e-18 95.1 103 50.5
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 1.1e-17 93.6 100 50.0
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 3.1e-17 92.0 92 52.2
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 3.5e-16 88.6 85 52.9
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 6.5e-15 84.3 102 45.1
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 7.7e-08 60.8 115 33.9


User provided reference genes

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