Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 8.6e-156 553.9 342 100.0
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 8.0e-45 185.3 188 54.8
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 8.0e-45 185.3 188 54.8
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 8.0e-45 185.3 188 54.8
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 1.4e-44 184.5 179 56.4
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 9.8e-43 178.3 179 52.5
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 9.8e-43 178.3 182 53.3
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 2.2e-42 177.2 145 60.0
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 6.4e-42 175.6 178 52.2
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 8.3e-42 175.3 178 51.1
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 1.1e-41 174.9 179 54.2
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 1.1e-41 174.9 180 50.0
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 1.9e-41 174.1 180 51.7
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 1.9e-41 174.1 182 53.3
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 2.4e-41 173.7 178 50.6
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 2.4e-41 173.7 177 53.7
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 3.2e-41 173.3 188 52.1
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 3.2e-41 173.3 188 52.1
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 4.1e-41 172.9 145 60.0
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 4.1e-41 172.9 178 51.7
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 7.0e-41 172.2 180 51.1
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 7.0e-41 172.2 152 57.9
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 9.2e-41 171.8 183 51.4
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 9.2e-41 171.8 178 52.8
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 1.6e-40 171.0 178 52.2
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 2.7e-40 170.2 111 68.5
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 2.7e-40 170.2 136 60.3
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 3.5e-40 169.9 188 49.5
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 4.6e-40 169.5 184 50.5
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.7e-39 167.5 116 65.5
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.7e-39 167.5 116 65.5
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 1.7e-39 167.5 149 57.0
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.3e-39 167.2 186 52.2
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 2.3e-39 167.2 179 52.5
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 2.3e-39 167.2 153 57.5
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.0e-39 166.8 186 51.6
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 5.0e-39 166.0 178 48.9
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 5.0e-39 166.0 185 53.0
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 5.0e-39 166.0 188 50.5
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 6.6e-39 165.6 161 54.7
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 6.6e-39 165.6 178 50.0
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 8.6e-39 165.2 181 50.3
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.1e-38 164.9 182 51.6
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.5e-38 163.7 116 64.7
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 3.3e-38 163.3 114 64.9
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 4.3e-38 162.9 186 51.1
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 7.3e-38 162.2 106 65.1
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 9.5e-38 161.8 144 56.9
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 1.2e-37 161.4 184 50.0
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.2e-37 161.4 180 50.6
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 2.1e-37 160.6 148 54.7
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 2.8e-37 160.2 188 45.7
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 3.6e-37 159.8 188 48.4
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 6.2e-37 159.1 178 48.9
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 6.2e-37 159.1 181 48.6
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 8.0e-37 158.7 123 61.8
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.8e-36 157.5 193 47.7
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.3e-36 157.1 141 52.5
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 3.1e-36 156.8 122 61.5
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 4.0e-36 156.4 183 49.2
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 6.8e-36 155.6 188 48.9
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 1.2e-35 154.8 181 48.1
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.2e-35 154.8 157 51.0
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 1.2e-35 154.8 181 48.6
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 2.0e-35 154.1 140 52.9
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.0e-35 154.1 140 52.9
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.4e-35 152.9 154 48.1
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 4.4e-35 152.9 170 51.2
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 5.8e-35 152.5 191 44.5
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 7.5e-35 152.1 178 52.8
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.3e-34 151.4 178 47.8
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 1.7e-34 151.0 192 49.5
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 2.2e-34 150.6 153 52.9
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 2.2e-34 150.6 140 54.3
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 2.2e-34 150.6 136 56.6
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 3.7e-34 149.8 181 51.9
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 8.3e-34 148.7 128 57.0
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 1.9e-33 147.5 140 55.0
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 2.4e-33 147.1 182 46.2
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 3.2e-33 146.7 180 46.7
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 4.1e-33 146.4 176 46.0
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 7.0e-33 145.6 182 46.2
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 4.6e-32 142.9 186 47.3
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 7.8e-32 142.1 169 47.3
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 1.0e-31 141.7 169 47.3
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 1.5e-30 137.9 176 42.6
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 9.5e-30 135.2 86 65.1
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 1.6e-29 134.4 92 62.0
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 2.3e-28 130.6 177 42.4
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 2.0e-27 127.5 154 46.1
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 4.6e-24 116.3 134 49.3
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 2.5e-22 110.5 167 41.3
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 3.3e-22 110.2 160 44.4
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 2.1e-21 107.5 145 46.9
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 3.6e-21 106.7 150 44.0
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 1.7e-18 97.8 165 42.4
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 7.1e-17 92.4 127 44.1
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 1.6e-13 81.3 133 39.1
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 3.6e-13 80.1 62 54.8
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 7.1e-09 65.9 99 41.4
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 9.6e-06 55.5 75 36.0


User provided reference genes

Program Settings