Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21078 Sequoiadendron giganteum HOM05D013172 ORTHO05D010935 3.5e-100 368.2 181 100.0
SEGI_28430 Sequoiadendron giganteum HOM05D013172 ORTHO05D010935 1.1e-93 346.7 171 100.0
SEGI_28840 Sequoiadendron giganteum HOM05D013172 ORTHO05D010935 1.8e-64 249.6 174 68.4
SEGI_14527 Sequoiadendron giganteum HOM05D000188 ORTHO05D010935 2.4e-64 249.2 175 69.1
SEGI_10404 Sequoiadendron giganteum HOM05D013172 ORTHO05D010935 1.6e-63 246.5 175 68.0
SEGI_19000 Sequoiadendron giganteum HOM05D000188 ORTHO05D010935 8.5e-62 240.7 175 65.7
SEGI_20237 Sequoiadendron giganteum HOM05D013172 ORTHO05D010935 7.0e-56 221.1 176 61.4
CBR_g45940 Chara braunii HOM05D003704 ORTHO05D010935 7.5e-26 121.3 183 41.0
CBR_g54014 Chara braunii HOM05D000188 ORTHO05D010935 9.8e-26 120.9 185 39.5
CBR_g21905 Chara braunii HOM05D000188 ORTHO05D010935 1.3e-25 120.6 183 41.5
SMO240G0022 Selaginella moellendorffii HOM05D000188 ORTHO05D010935 2.7e-23 112.8 177 42.4
SMO340G0315 Selaginella moellendorffii HOM05D011138 ORTHO05D010935 6.0e-23 111.7 177 41.8
SEGI_27061 Sequoiadendron giganteum HOM05D000188 ORTHO05D010935 6.6e-22 108.2 175 40.0
AagrBONN_evm.TU.Sc2ySwM_117.575 Anthoceros agrestis HOM05D000188 ORTHO05D010935 1.9e-21 106.7 179 38.5
SEGI_37116 Sequoiadendron giganteum HOM05D000188 ORTHO05D010935 1.6e-20 103.6 182 37.9
SEGI_10774 Sequoiadendron giganteum HOM05D000188 ORTHO05D010935 3.1e-19 99.4 175 36.6
SEGI_27020 Sequoiadendron giganteum HOM05D011138 ORTHO05D010935 6.8e-19 98.2 175 36.0
SEGI_35027 Sequoiadendron giganteum HOM05D011138 ORTHO05D010935 6.8e-19 98.2 175 36.0
Cre03.g166850 Chlamydomonas reinhardtii HOM05D003704 ORTHO05D010935 2.6e-18 96.3 199 32.7
Mapoly0032s0139 Marchantia polymorpha HOM05D000188 ORTHO05D010935 3.4e-18 95.9 177 37.9
Mapoly0032s0134 Marchantia polymorpha HOM05D000188 ORTHO05D010935 7.5e-18 94.7 177 37.3
AagrBONN_evm.TU.Sc2ySwM_117.572 Anthoceros agrestis HOM05D011138 ORTHO05D010935 1.7e-17 93.6 179 35.8
SMO361G0816 Selaginella moellendorffii HOM05D011138 ORTHO05D010935 6.4e-17 91.7 181 37.0
MCO17G053 Micromonas commoda HOM05D000188 ORTHO05D010935 1.9e-16 90.1 184 29.9
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 5.4e-16 88.6 207 31.4
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 9.2e-16 87.8 208 30.8
AagrBONN_evm.TU.Sc2ySwM_344.744 Anthoceros agrestis HOM05D011138 ORTHO05D010935 3.5e-15 85.9 178 34.8
SEGI_06232 Sequoiadendron giganteum HOM05D011138 ORTHO05D010935 3.0e-14 82.8 102 44.1
Lj1g0015472 Lotus japonicus HOM05D000188 ORTHO05D007437 1.3e-09 67.4 178 31.5
CBR_g46748 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-09 66.2 187 28.9
CBR_g46745 Chara braunii HOM05D001523 ORTHO05D010935 3.8e-09 65.9 190 28.9
Glyma.19G142100 Glycine max HOM05D000188 ORTHO05D007437 3.8e-09 65.9 178 30.9
Phvul.001G136200 Phaseolus vulgaris HOM05D000188 ORTHO05D007437 3.8e-09 65.9 178 31.5
Aa31sc40G10 Aethionema arabicum HOM05D000188 ORTHO05D007437 8.4e-09 64.7 176 29.5
CDE05G3373 Ceratophyllum demersum HOM05D000188 ORTHO05D007437 8.4e-09 64.7 176 31.2
Duzib128G1302 Durio zibethinus HOM05D000188 ORTHO05D007437 8.4e-09 64.7 176 30.1
Rhsim04G0100100 Rhododendron simsii HOM05D000188 ORTHO05D007437 1.1e-08 64.3 176 30.7
Sed0022594 Sechium edule HOM05D000188 ORTHO05D007437 1.1e-08 64.3 183 29.5
CiPaw.09G035200 Carya illinoinensis HOM05D000188 ORTHO05D007437 1.4e-08 63.9 176 30.7
MBI01_g18887_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D007437 1.4e-08 63.9 178 30.9
Eucgr.A02391 Eucalyptus grandis HOM05D000188 ORTHO05D007437 1.9e-08 63.5 176 30.7
Prupe.7G066800 Prunus persica HOM05D000188 ORTHO05D007437 1.9e-08 63.5 176 31.2
Sabra06G0038600 Salix brachista HOM05D000188 ORTHO05D007437 1.9e-08 63.5 176 29.5
vmacro09090 Vaccinium macrocarpon HOM05D000188 ORTHO05D007437 1.9e-08 63.5 176 30.7
VMungo1383G2187 Vigna mungo HOM05D000188 ORTHO05D007437 1.9e-08 63.5 178 30.9
Carub.0005s0219 Capsella rubella HOM05D000188 ORTHO05D007437 2.4e-08 63.2 176 29.0
Nn7g36129 Nelumbo nucifera HOM05D000188 ORTHO05D007437 3.2e-08 62.8 176 30.7
Potri.006G054600 Populus trichocarpa HOM05D000188 ORTHO05D007437 3.2e-08 62.8 176 29.5
A09p24290 Brassica napus HOM05D000188 ORTHO05D007437 4.2e-08 62.4 176 29.5
BraA09t38025Z Brassica rapa HOM05D000188 ORTHO05D007437 4.2e-08 62.4 176 29.5
SEGI_31684 Sequoiadendron giganteum HOM05D000347 ORTHO05D386026 4.2e-08 62.4 43 72.1
Aqoxy1G00273 Aquilegia oxysepala HOM05D000188 ORTHO05D007437 5.4e-08 62.0 176 31.2
CANSAT80G2344 Cannabis sativa HOM05D000188 ORTHO05D007437 5.4e-08 62.0 176 30.1
ClCG10G017150 Citrullus lanatus HOM05D000188 ORTHO05D007437 5.4e-08 62.0 176 29.0
MELO3C009668.2 Cucumis melo HOM05D000188 ORTHO05D007437 5.4e-08 62.0 176 29.0
CsaV3_3G039240 Cucumis sativus L. HOM05D000188 ORTHO05D007437 5.4e-08 62.0 176 29.0
Sp2g14200 Schrenkiella parvula HOM05D000188 ORTHO05D007437 5.4e-08 62.0 176 29.5
Ciclev10004523m.g Citrus clementina HOM05D000188 ORTHO05D007437 9.3e-08 61.2 176 29.5
AT2G03270 Arabidopsis thaliana HOM05D000188 ORTHO05D007437 1.2e-07 60.8 176 29.0
ECA234G1888 Erigeron canadensis HOM05D000188 ORTHO05D007437 1.2e-07 60.8 176 29.0
QL07p021464 Quercus lobata HOM05D000188 ORTHO05D007437 1.2e-07 60.8 176 30.1
FvH4_6g23281 Fragaria vesca HOM05D000188 ORTHO05D007437 1.6e-07 60.5 177 29.4
RcHm_v2.0_Chr3g0481241 Rosa chinensis HOM05D000188 ORTHO05D007437 1.6e-07 60.5 177 29.4
Sc13g0001930 Simmondsia chinensis HOM05D000188 ORTHO05D007437 1.6e-07 60.5 176 29.5
Cpa.g.sc92.15 Carica papaya HOM05D000188 ORTHO05D007437 2.1e-07 60.1 176 30.7
FAN02G0408 Fragaria x ananassa HOM05D000188 ORTHO05D007437 2.1e-07 60.1 177 29.4
FAN14G5355 Fragaria x ananassa HOM05D000188 ORTHO05D007437 2.1e-07 60.1 177 29.4
Hma1.2p1_0621F.1_g190750 Hydrangea macrophylla HOM05D000188 ORTHO05D007437 2.1e-07 60.1 176 30.7
Hma1.2p1_0621F.1_g190760 Hydrangea macrophylla HOM05D000188 ORTHO05D007437 2.1e-07 60.1 176 30.7
AL5G12910 Arabidopsis lyrata HOM05D000188 ORTHO05D007437 2.7e-07 59.7 176 29.0
MD14G1067600 Malus domestica HOM05D000188 ORTHO05D007437 2.7e-07 59.7 176 30.1
Cc06_g16650 Coffea canephora HOM05D000188 ORTHO05D007437 3.5e-07 59.3 176 31.2
THA.LOC104827302 Tarenaya hassleriana HOM05D000188 ORTHO05D007437 3.5e-07 59.3 176 29.5
Zm00001eb049300 Zea mays HOM05D000188 ORTHO05D007437 3.5e-07 59.3 178 28.7
PSO339G4937 Papaver somniferum HOM05D000188 ORTHO05D007437 4.6e-07 58.9 178 30.3
PGR004G2356 Punica granatum HOM05D000188 ORTHO05D007437 4.6e-07 58.9 176 29.0
THA.LOC104808236 Tarenaya hassleriana HOM05D004823 ORTHO05D005814 4.6e-07 58.9 182 28.0
Thhalv10003809m.g Eutrema salsugineum HOM05D000188 ORTHO05D007437 6.0e-07 58.5 176 28.4
Aa31LG2G2630 Aethionema arabicum HOM05D000188 ORTHO05D000362 7.8e-07 58.2 178 30.9
HanXRQChr17g0566391 Helianthus annuus HOM05D000188 ORTHO05D007437 7.8e-07 58.2 176 29.0
MD12G1067500 Malus domestica HOM05D000188 ORTHO05D007437 7.8e-07 58.2 176 29.5
Hund19166 Selenicereus undatus HOM05D000188 ORTHO05D007437 7.8e-07 58.2 176 29.5
TWI74G0248 Tripterygium wilfordii HOM05D000188 ORTHO05D007437 7.8e-07 58.2 176 29.5
Actinidia38564 Actinidia chinensis HOM05D000188 ORTHO05D007437 1.0e-06 57.8 176 29.5
Lsat_1_v5_gn_4_24661 Lactuca sativa HOM05D000188 ORTHO05D007437 1.0e-06 57.8 177 28.8
Manes.09G028600 Manihot esculenta HOM05D000188 ORTHO05D007437 1.0e-06 57.8 176 29.5
TAR369G1129 Trochodendron aralioides HOM05D000188 ORTHO05D007437 1.0e-06 57.8 176 29.0
C09p31150 Brassica napus HOM05D000188 ORTHO05D007437 1.3e-06 57.4 176 28.4
BolC9t55972H Brassica oleracea HOM05D000188 ORTHO05D007437 1.3e-06 57.4 176 28.4
Aa31sc17G210 Aethionema arabicum HOM05D004823 ORTHO05D005814 2.3e-06 56.6 182 25.8
Lj2C379G3 Lonicera japonica HOM05D004307 ORTHO05D005068 3.0e-06 56.2 176 29.0
Aqoxy1G04161 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 3.9e-06 55.8 182 28.6
Aqoxy263s003 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 3.9e-06 55.8 182 28.6
Cre01.g040379 Chlamydomonas reinhardtii HOM05D000188 ORTHO05D000362 3.9e-06 55.8 199 26.1
Dinv24129 Davidia involucrata HOM05D000188 ORTHO05D007437 3.9e-06 55.8 163 28.8
Medtr5g053930 Medicago truncatula HOM05D000188 ORTHO05D005820 3.9e-06 55.8 181 29.3
PGR083G0266 Punica granatum HOM05D004823 ORTHO05D005814 3.9e-06 55.8 184 29.3
SMO230G0016 Selaginella moellendorffii HOM05D003704 ORTHO05D005892 3.9e-06 55.8 176 29.0
Carub.0008s0082 Capsella rubella HOM05D000188 ORTHO05D003976 5.1e-06 55.5 172 30.2
Haze_26602 Corylus avellana HOM05D000188 ORTHO05D003976 5.1e-06 55.5 169 29.0
CANSAT78G1684 Cannabis sativa HOM05D000188 ORTHO05D000362 6.6e-06 55.1 96 36.5
MCO01G629 Micromonas commoda HOM05D003704 ORTHO05D005892 8.7e-06 54.7 175 29.7
PSO384G0288 Papaver somniferum HOM05D000188 ORTHO05D007437 8.7e-06 54.7 186 29.0
THA.LOC104820240 Tarenaya hassleriana HOM05D000188 ORTHO05D005820 8.7e-06 54.7 177 27.1


User provided reference genes

Program Settings