Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21070 Sequoiadendron giganteum HOM05D000513 ORTHO05D005786 0.0e+00 1686.8 887 100.0
Nn1g07138 Nelumbo nucifera HOM05D000513 ORTHO05D005786 1.5e-172 610.9 476 63.9
Gorai.009G178700 Gossypium raimondii HOM05D000513 ORTHO05D005786 7.1e-170 602.1 541 58.0
Duzib235G0182 Durio zibethinus HOM05D000513 ORTHO05D005786 1.2e-169 601.3 478 62.1
Gohir.D05G173500 Gossypium hirsutum HOM05D000513 ORTHO05D005786 1.8e-168 597.4 541 57.5
COL.COLO4_31779 Corchorus olitorius HOM05D000513 ORTHO05D005786 8.7e-168 595.1 606 53.5
Gohir.A05G170400 Gossypium hirsutum HOM05D000513 ORTHO05D005786 3.3e-167 593.2 641 52.0
TAR627G1077 Trochodendron aralioides HOM05D000513 ORTHO05D005786 3.3e-167 593.2 587 53.8
CANSAT78G1563 Cannabis sativa HOM05D000513 ORTHO05D005786 5.7e-167 592.4 647 52.7
Lj1C1231T2 Lonicera japonica HOM05D000513 ORTHO05D005786 5.7e-167 592.4 476 59.5
MBI02_g05872_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D005786 5.7e-167 592.4 476 61.3
Rhsim13G0153900 Rhododendron simsii HOM05D000513 ORTHO05D005786 5.7e-167 592.4 600 53.7
Thecc.06G220800 Theobroma cacao HOM05D000513 ORTHO05D005786 5.7e-167 592.4 681 49.5
Aqoxy1G02137 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 9.6e-167 591.7 678 50.0
Eucgr.D01324 Eucalyptus grandis HOM05D000513 ORTHO05D005786 1.3e-166 591.3 476 60.1
Prupe.4G020100 Prunus persica HOM05D000513 ORTHO05D005786 3.7e-166 589.7 477 59.7
PGR004G0078 Punica granatum HOM05D000513 ORTHO05D005786 4.8e-166 589.3 668 51.5
Dinv20054 Davidia involucrata HOM05D000513 ORTHO05D005786 1.1e-165 588.2 476 60.1
Dinv13896 Davidia involucrata HOM05D000513 ORTHO05D005786 3.1e-165 586.6 476 62.2
TAR629G0438 Trochodendron aralioides HOM05D000513 ORTHO05D005786 4.1e-165 586.3 483 61.1
Hma1.2p1_0749F.1_g212600 Hydrangea macrophylla HOM05D000513 ORTHO05D005786 1.2e-164 584.7 664 47.7
Cfa000217 Carpinus fangiana HOM05D000513 ORTHO05D005786 1.5e-164 584.3 642 49.2
Cpa.g.sc152.17 Carica papaya HOM05D000513 ORTHO05D005786 7.6e-164 582.0 478 59.4
CiPaw.10G071400 Carya illinoinensis HOM05D000513 ORTHO05D005786 1.0e-163 581.6 594 52.5
Potri.004G014100 Populus trichocarpa HOM05D000513 ORTHO05D005786 1.3e-163 581.3 703 47.7
ATR0794G058 Amborella trichopoda HOM05D000513 ORTHO05D005786 1.1e-162 578.2 640 49.8
QL05p073090 Quercus lobata HOM05D000513 ORTHO05D005786 1.4e-162 577.8 548 54.4
Manes.16G006900 Manihot esculenta HOM05D000513 ORTHO05D005786 1.9e-162 577.4 662 49.8
TWI38G1833 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 1.9e-162 577.4 676 48.1
Actinidia05513 Actinidia chinensis HOM05D000513 ORTHO05D005786 3.2e-162 576.6 481 59.0
Hund23468 Selenicereus undatus HOM05D000513 ORTHO05D005786 2.1e-161 573.9 476 60.1
SGA_v2.0_scaffold4G01913 Striga asiatica HOM05D000513 ORTHO05D005786 4.6e-161 572.8 705 44.8
Solyc02g080570.3 Solanum lycopersicum HOM05D000513 ORTHO05D005786 6.1e-161 572.4 476 61.3
Sabra04G0007000 Salix brachista HOM05D000513 ORTHO05D005786 1.8e-160 570.9 479 56.6
CSS0023626 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D005786 3.0e-160 570.1 542 53.9
MELO3C002455.2 Cucumis melo HOM05D000513 ORTHO05D005786 3.0e-160 570.1 667 48.3
FAN21G2967 Fragaria x ananassa HOM05D000513 ORTHO05D005786 3.0e-160 570.1 477 58.9
MD05G1347400 Malus domestica HOM05D000513 ORTHO05D005786 3.0e-160 570.1 574 54.7
Zm00001eb070230 Zea mays HOM05D000513 ORTHO05D005786 3.9e-160 569.7 478 59.2
FAN25G0071 Fragaria x ananassa HOM05D000513 ORTHO05D005786 5.1e-160 569.3 477 60.2
Sed0027566 Sechium edule HOM05D000513 ORTHO05D005786 5.1e-160 569.3 479 56.6
Sopen02g025270 Solanum pennellii HOM05D000513 ORTHO05D005786 5.1e-160 569.3 476 60.3
FvH4_3g02040 Fragaria vesca HOM05D000513 ORTHO05D005786 6.7e-160 568.9 477 56.0
CAN.G569.6 Capsicum annuum HOM05D000513 ORTHO05D005786 8.7e-160 568.5 476 62.0
MSTRG.7208 Avicennia marina HOM05D000513 ORTHO05D005786 1.1e-159 568.2 620 50.8
Cc09_g01640 Coffea canephora HOM05D000513 ORTHO05D005786 1.5e-159 567.8 707 47.2
arahy.Tifrunner.gnm1.ann1.4XJ09G Arachis hypogaea HOM05D000513 ORTHO05D005786 1.9e-159 567.4 632 49.4
arahy.Tifrunner.gnm1.ann1.A9I5GT Arachis hypogaea HOM05D000513 ORTHO05D005786 1.9e-159 567.4 643 48.5
Sc17g0007400 Simmondsia chinensis HOM05D000513 ORTHO05D005786 1.9e-159 567.4 620 50.3
TWI63G0257 Tripterygium wilfordii HOM05D000513 ORTHO05D005786 2.5e-159 567.0 677 45.1
AUR62012712 Chenopodium quinoa HOM05D000513 ORTHO05D005786 4.3e-159 566.2 626 48.4
Os04g0624600 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 4.3e-159 566.2 537 53.8
Lj6g0028016 Lotus japonicus HOM05D000513 ORTHO05D005786 1.6e-158 564.3 585 49.6
THA.LOC104809504 Tarenaya hassleriana HOM05D000513 ORTHO05D005786 1.6e-158 564.3 532 56.6
Gorai.011G013800 Gossypium raimondii HOM05D000513 ORTHO05D005786 2.2e-158 563.9 478 54.6
Gohir.D10G012300 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.8e-158 563.5 478 54.6
Haze_06803 Corylus avellana HOM05D000513 ORTHO05D005786 8.2e-158 562.0 652 48.6
Glyma.07G260500 Glycine max HOM05D000513 ORTHO05D005786 2.4e-157 560.5 478 58.2
Peaxi162Scf01102g00005 Petunia axillaris HOM05D000513 ORTHO05D005786 2.4e-157 560.5 618 50.5
RcHm_v2.0_Chr5g0002941 Rosa chinensis HOM05D000513 ORTHO05D005786 3.1e-157 560.1 477 58.5
Thhalv10006631m.g Eutrema salsugineum HOM05D000513 ORTHO05D005786 4.1e-157 559.7 690 47.7
CARHR012030 Cardamine hirsuta HOM05D000513 ORTHO05D005786 6.9e-157 558.9 679 49.6
PSO541G4629 Papaver somniferum HOM05D000513 ORTHO05D005786 9.0e-157 558.5 697 45.5
Atru.chr10.2232 Acer truncatum HOM05D000513 ORTHO05D005786 1.2e-156 558.1 478 57.7
SalBow8G1130 Salvia bowleyana HOM05D000513 ORTHO05D005786 1.2e-156 558.1 655 51.1
Gohir.A10G012640 Gossypium hirsutum HOM05D000513 ORTHO05D005786 2.0e-156 557.4 478 53.6
AUR62021943 Chenopodium quinoa HOM05D000513 ORTHO05D005786 3.4e-156 556.6 656 47.6
A08p33270 Brassica napus HOM05D000513 ORTHO05D005786 7.7e-156 555.4 551 55.7
Phvul.006G149680 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 1.7e-155 554.3 547 52.3
EL10Ac8g20060 Beta vulgaris HOM05D000513 ORTHO05D005786 2.2e-155 553.9 610 50.3
BraA08t35246Z Brassica rapa HOM05D000513 ORTHO05D005786 2.2e-155 553.9 541 56.4
BolC8t49121H Brassica oleracea HOM05D000513 ORTHO05D005786 3.8e-155 553.1 500 57.8
CsaV3_1G010740 Cucumis sativus L. HOM05D000513 ORTHO05D005786 3.8e-155 553.1 650 48.9
Glyma.13G204700 Glycine max HOM05D000513 ORTHO05D005786 3.8e-155 553.1 584 50.9
Glyma.15G108000 Glycine max HOM05D000513 ORTHO05D005786 6.5e-155 552.4 581 50.1
PSO675G1484 Papaver somniferum HOM05D000513 ORTHO05D005786 8.5e-155 552.0 659 46.3
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.1e-154 551.6 510 56.1
VMungo0540G1206 Vigna mungo HOM05D000513 ORTHO05D005786 1.4e-154 551.2 547 52.8
Lj1g0022645 Lotus japonicus HOM05D000513 ORTHO05D005786 1.9e-154 550.8 591 46.7
DCAR_008154 Daucus carota HOM05D000513 ORTHO05D005786 4.2e-154 549.7 578 52.2
MD10G1321600 Malus domestica HOM05D000513 ORTHO05D005786 5.5e-154 549.3 639 49.9
C08p14920 Brassica napus HOM05D000513 ORTHO05D005786 1.2e-153 548.1 566 52.7
A06p08280 Brassica napus HOM05D000316 ORTHO05D005786 2.7e-153 547.0 544 55.5
C05p09830 Brassica napus HOM05D000316 ORTHO05D005786 2.7e-153 547.0 483 59.2
BraA06t24027Z Brassica rapa HOM05D000513 ORTHO05D005786 2.7e-153 547.0 544 55.5
Nitab4.5_0005074g0060 Nicotiana tabacum HOM05D000513 ORTHO05D005786 3.6e-153 546.6 476 57.4
BolC5t29724H Brassica oleracea HOM05D000316 ORTHO05D005786 6.1e-153 545.8 504 56.3
Carub.0001s1136 Capsella rubella HOM05D000513 ORTHO05D005786 6.1e-153 545.8 659 46.9
AT1G11720 Arabidopsis thaliana HOM05D000513 ORTHO05D005786 1.4e-152 544.7 665 48.1
arahy.Tifrunner.gnm1.ann1.J4P8M7 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.4e-152 544.7 471 56.1
Os08g0191433 Oryza sativa ssp. japonica HOM05D000513 ORTHO05D005786 2.3e-152 543.9 522 53.1
AL1G22860 Arabidopsis lyrata HOM05D000513 ORTHO05D005786 6.7e-152 542.3 585 52.1
Ca_00662_v3 Cicer arietinum L. HOM05D000513 ORTHO05D005786 9.7e-151 538.5 577 46.8
BcaC05g25041 Brassica carinata HOM05D000513 ORTHO05D005786 1.3e-150 538.1 593 52.8
Mapoly0055s0049 Marchantia polymorpha HOM05D000513 ORTHO05D005786 8.2e-150 535.4 659 46.3
Zm00001eb413290 Zea mays HOM05D000513 ORTHO05D005786 1.8e-149 534.3 476 55.3
Lsat_1_v5_gn_1_128760 Lactuca sativa HOM05D002121 ORTHO05D005786 4.1e-149 533.1 634 48.9
Sp1g10330 Schrenkiella parvula HOM05D000513 ORTHO05D005786 1.2e-148 531.6 585 52.3
Lalb_Chr12g0196091 Lupinus albus HOM05D000513 ORTHO05D005786 1.5e-148 531.2 478 52.7
Medtr2g023320 Medicago truncatula HOM05D000513 ORTHO05D005786 4.5e-148 529.6 659 46.3
Ah.14g088010 Amaranthus hybridus HOM05D000513 ORTHO05D005786 5.9e-148 529.3 679 44.6
HanXRQChr01g0004221 Helianthus annuus HOM05D000513 ORTHO05D005786 2.9e-147 526.9 478 57.7
unitig_748.g7967 Utricularia gibba HOM05D000513 ORTHO05D005786 2.9e-147 526.9 629 47.5
Lalb_Chr15g0087621 Lupinus albus HOM05D000513 ORTHO05D005786 3.8e-147 526.6 587 49.2
Lj4g0014019 Lotus japonicus HOM05D000513 ORTHO05D005786 8.5e-147 525.4 478 54.4
Sed0006328 Sechium edule HOM05D000513 ORTHO05D005786 8.5e-147 525.4 658 45.9
Aa31LG1G3050 Aethionema arabicum HOM05D000513 ORTHO05D005786 2.5e-146 523.9 591 49.7
Psat1g180640 Pisum sativum HOM05D000513 ORTHO05D005786 9.4e-146 521.9 684 42.7
SMO239G0166 Selaginella moellendorffii HOM05D000513 ORTHO05D005786 1.2e-145 521.5 465 56.6
ECA248G2927 Erigeron canadensis HOM05D000513 ORTHO05D005786 1.6e-145 521.2 660 45.2
vmacro03685 Vaccinium macrocarpon HOM05D000513 ORTHO05D005786 3.6e-145 520.0 589 48.2
ClCG03G004710 Citrullus lanatus HOM05D000513 ORTHO05D005786 7.9e-145 518.8 649 46.4
VMungo1215G0539 Vigna mungo HOM05D000513 ORTHO05D005786 3.0e-144 516.9 479 50.7
Manes.17G038908 Manihot esculenta HOM05D000513 ORTHO05D005786 6.7e-144 515.8 674 46.1
Phvul.003G078800 Phaseolus vulgaris HOM05D000513 ORTHO05D005786 2.0e-143 514.2 672 44.5
TPR.G9945 Trifolium pratense HOM05D000513 ORTHO05D005786 5.7e-143 512.7 708 43.4
Oeu051893.1 Olea europaea HOM05D000513 ORTHO05D005786 6.3e-142 509.2 639 44.3
GSVIVG01012723001 Vitis vinifera HOM05D000513 ORTHO05D005786 2.9e-139 500.4 670 46.9
Oeu051208.1 Olea europaea HOM05D000513 ORTHO05D005786 5.0e-139 499.6 665 46.2
HPP92_011146 Vanilla planifolia HOM05D000513 ORTHO05D005786 4.0e-136 490.0 637 43.8
Migut.M01321 Erythranthe guttata HOM05D000513 ORTHO05D005786 4.8e-134 483.0 501 51.5
Zm00001eb431240 Zea mays HOM05D000513 ORTHO05D005786 5.9e-132 476.1 418 57.2
CBR_g950 Chara braunii HOM05D000513 ORTHO05D005786 7.2e-130 469.2 466 49.8
Nitab4.5_0002827g0060 Nicotiana tabacum HOM05D000513 ORTHO05D005786 5.5e-122 443.0 646 42.4
Ciclev10014319m.g Citrus clementina HOM05D000513 ORTHO05D005786 2.3e-115 421.0 365 56.2
AagrBONN_evm.TU.Sc2ySwM_344.2070 Anthoceros agrestis HOM05D000513 ORTHO05D005786 3.6e-113 413.7 414 50.5
Manes.17G038964 Manihot esculenta HOM05D000513 ORTHO05D005786 3.0e-83 314.3 243 61.7
CDE05G3649 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 3.9e-83 313.9 223 66.8
Actinidia26912 Actinidia chinensis HOM05D000513 ORTHO05D005786 3.3e-82 310.8 478 40.6
HPP92_011145 Vanilla planifolia HOM05D000513 ORTHO05D005786 1.4e-72 278.9 430 37.9
Aqoxy4G02302 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 2.1e-65 255.0 229 54.6
CDE05G0345 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 2.1e-65 255.0 188 64.4
C08p14860 Brassica napus HOM05D000513 ORTHO05D005786 1.5e-55 222.2 151 72.2
PRCOL_00000831 Prasinoderma coloniale HOM05D000513 ORTHO05D005786 1.3e-54 219.2 477 30.4
Cre06.g282000 Chlamydomonas reinhardtii HOM05D000513 ORTHO05D005786 2.5e-53 214.9 505 30.1
MCO16G430 Micromonas commoda HOM05D000513 ORTHO05D005786 3.3e-42 177.9 483 28.2
CDE05G3334 Ceratophyllum demersum HOM05D000513 ORTHO05D005786 1.2e-36 159.5 341 30.5
Aqoxy4G02301 Aquilegia oxysepala HOM05D000513 ORTHO05D005786 2.2e-30 138.7 166 45.8
Cre13.g579582 Chlamydomonas reinhardtii HOM05D000513 ORTHO05D005786 1.6e-28 132.5 285 32.3
SEGI_30728 Sequoiadendron giganteum HOM05D023223 ORTHO05D000007 5.2e-27 127.5 110 63.6
Actinidia26911 Actinidia chinensis HOM05D000513 ORTHO05D005786 1.7e-25 122.5 82 68.3
SEGI_14141 Sequoiadendron giganteum HOM05D015590 ORTHO05D000007 5.9e-23 114.0 216 39.4
AUR62044272 Chenopodium quinoa HOM05D000513 ORTHO05D005786 5.0e-22 110.9 74 70.3
DCAR_027732 Daucus carota HOM05D000513 ORTHO05D005786 1.0e-19 103.2 61 78.7
SEGI_35781 Sequoiadendron giganteum HOM05D023223 ORTHO05D384088 8.8e-19 100.1 93 58.1
SEGI_37762 Sequoiadendron giganteum HOM05D002786 ORTHO05D003493 1.7e-17 95.9 84 64.3
SEGI_02814 Sequoiadendron giganteum HOM05D000121 ORTHO05D000102 4.8e-17 94.4 89 56.2
MCO14G300 Micromonas commoda HOM05D000513 ORTHO05D005786 1.1e-16 93.2 252 32.9
SEGI_40846 Sequoiadendron giganteum HOM05D023223 ORTHO05D386846 1.6e-15 89.4 90 52.2
Duzib106G0381 Durio zibethinus HOM05D000513 ORTHO05D035093 1.5e-10 72.8 52 63.5
SEGI_37551 Sequoiadendron giganteum HOM05D015590 ORTHO05D000007 1.5e-10 72.8 141 34.8
Duzib106G1194 Durio zibethinus HOM05D000513 ORTHO05D035093 3.4e-10 71.6 52 61.5
SEGI_34999 Sequoiadendron giganteum HOM05D023223 ORTHO05D000007 4.1e-08 64.7 96 38.5
SEGI_40961 Sequoiadendron giganteum HOM05D053939 ORTHO05D385731 4.1e-08 64.7 51 64.7
MCO08G155 Micromonas commoda HOM05D000513 ORTHO05D005786 7.0e-08 63.9 59 55.9


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