Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.2e-102 375.6 176 100.0
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.3e-30 137.1 113 57.5
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.7e-28 129.4 108 56.5
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 4.6e-28 128.6 105 57.1
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 6.0e-28 128.3 108 54.6
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 7.8e-28 127.9 101 59.4
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 7.8e-28 127.9 108 55.6
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.3e-27 127.1 108 58.3
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.7e-27 126.7 108 55.6
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 3.9e-27 125.6 105 54.3
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 3.9e-27 125.6 108 55.6
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 6.6e-27 124.8 108 53.7
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.6e-27 124.8 109 54.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.6e-27 124.8 109 54.1
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 6.6e-27 124.8 109 54.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 6.6e-27 124.8 105 55.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.6e-27 124.8 105 55.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 6.6e-27 124.8 105 55.2
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 8.7e-27 124.4 108 54.6
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 8.7e-27 124.4 101 56.4
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 8.7e-27 124.4 101 56.4
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 8.7e-27 124.4 108 55.6
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.1e-26 124.0 101 55.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.1e-26 124.0 108 55.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.5e-26 123.6 108 54.6
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.5e-26 123.6 101 55.4
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.9e-26 123.2 108 53.7
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.9e-26 123.2 108 53.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.9e-26 123.2 108 51.9
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.9e-26 123.2 121 52.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.9e-26 123.2 101 53.5
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.5e-26 122.9 105 54.3
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 2.5e-26 122.9 108 51.9
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.5e-26 122.9 105 53.3
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.3e-26 122.5 108 55.6
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.3e-26 122.5 108 57.4
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 3.3e-26 122.5 108 54.6
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.3e-26 122.5 109 55.0
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 4.3e-26 122.1 108 53.7
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.3e-26 122.1 102 53.9
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 5.6e-26 121.7 117 51.3
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.6e-26 121.7 108 51.9
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 7.3e-26 121.3 108 52.8
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 7.3e-26 121.3 108 52.8
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 7.3e-26 121.3 101 52.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 9.6e-26 120.9 105 53.3
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.6e-26 120.9 105 53.3
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 9.6e-26 120.9 105 52.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.2e-25 120.6 101 54.5
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.2e-25 120.6 105 51.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.6e-25 120.2 108 51.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.6e-25 120.2 101 55.4
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.1e-25 119.8 101 51.5
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.8e-25 119.4 111 55.0
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 3.6e-25 119.0 105 53.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 3.6e-25 119.0 101 53.5
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 3.6e-25 119.0 101 53.5
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.1e-24 117.5 105 51.4
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.4e-24 117.1 108 52.8
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.8e-24 116.7 108 50.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.8e-24 116.7 108 51.9
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.4e-24 116.3 102 54.9
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.1e-24 115.9 105 51.4
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 6.9e-24 114.8 105 50.5
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 9.0e-24 114.4 106 54.7
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.2e-23 114.0 101 48.5
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 7.6e-23 111.3 113 49.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.8e-22 109.0 85 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 6.4e-22 108.2 106 50.9
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 6.4e-22 108.2 106 52.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 1.4e-21 107.1 105 46.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.1e-20 103.2 139 40.3
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.3e-19 100.5 91 50.5
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 6.6e-19 98.2 112 47.3
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.9e-18 96.7 90 52.2
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.5e-15 87.0 89 49.4
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.1e-13 80.9 65 60.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.4e-13 80.5 83 44.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.6e-12 77.0 65 58.5
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.1e-12 76.6 65 56.9
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.0e-12 75.1 65 56.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 2.3e-11 73.2 112 37.5
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 3.9e-11 72.4 113 34.5
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.1e-08 64.3 101 35.6
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.4e-08 63.9 64 50.0
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.9e-08 61.6 91 41.8


User provided reference genes

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