Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.3e-102 376.3 185 100.0
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 7.5e-98 360.5 179 98.9
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 2.4e-35 152.9 136 53.7
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.3e-33 147.1 139 51.1
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.8e-33 145.6 143 53.1
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 5.0e-33 145.2 143 49.7
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 1.4e-32 143.7 142 50.0
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 2.5e-32 142.9 142 52.1
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.6e-31 140.2 138 50.7
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 1.8e-30 136.7 144 45.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.3e-30 136.3 139 47.5
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 6.7e-30 134.8 130 48.5
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 2.0e-29 133.3 138 49.3
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 2.6e-29 132.9 144 45.1
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 4.4e-29 132.1 142 45.8
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 4.4e-29 132.1 138 48.6
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 4.4e-29 132.1 144 45.1
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 5.7e-29 131.7 143 47.6
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 5.7e-29 131.7 141 48.2
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 5.7e-29 131.7 140 44.3
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 7.4e-29 131.3 144 44.4
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 9.7e-29 131.0 144 46.5
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 9.7e-29 131.0 142 50.7
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 9.7e-29 131.0 138 47.8
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 9.7e-29 131.0 137 48.9
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 9.7e-29 131.0 147 46.3
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 1.3e-28 130.6 138 47.8
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.7e-28 130.2 130 48.5
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 2.2e-28 129.8 136 48.5
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 2.8e-28 129.4 137 44.5
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 3.7e-28 129.0 137 48.2
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 4.8e-28 128.6 132 49.2
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 6.3e-28 128.3 147 43.5
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 6.3e-28 128.3 139 46.0
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 6.3e-28 128.3 138 47.8
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 8.2e-28 127.9 140 47.9
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.1e-27 127.5 138 47.1
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 1.1e-27 127.5 148 46.6
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 1.4e-27 127.1 139 50.4
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 1.8e-27 126.7 138 47.8
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.8e-27 126.7 137 47.4
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.8e-27 126.7 137 47.4
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 2.4e-27 126.3 128 47.7
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 3.1e-27 125.9 137 48.2
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 3.1e-27 125.9 140 45.7
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 4.1e-27 125.6 147 42.9
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 7.0e-27 124.8 87 62.1
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 1.2e-26 124.0 154 37.7
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 2.0e-26 123.2 152 42.1
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 2.6e-26 122.9 133 47.4
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 4.5e-26 122.1 126 49.2
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 7.7e-26 121.3 133 48.9
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 7.7e-26 121.3 107 53.3
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.0e-25 120.9 106 51.9
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 1.0e-25 120.9 146 47.9
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.0e-25 120.9 143 45.5
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.3e-25 120.6 104 51.9
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 1.3e-25 120.6 133 48.1
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.3e-25 120.6 147 44.2
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 1.3e-25 120.6 152 41.4
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 1.3e-25 120.6 146 42.5
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 2.2e-25 119.8 152 41.4
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 2.9e-25 119.4 150 40.7
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 2.9e-25 119.4 131 46.6
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 2.9e-25 119.4 133 47.4
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.0e-25 118.6 140 42.9
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 5.0e-25 118.6 132 47.0
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 8.5e-25 117.9 136 46.3
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 8.5e-25 117.9 140 45.0
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.5e-24 117.1 140 42.9
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.5e-24 117.1 139 45.3
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 2.5e-24 116.3 143 42.7
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 4.2e-24 115.5 137 45.3
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 4.2e-24 115.5 137 43.8
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 4.2e-24 115.5 144 44.4
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 7.2e-24 114.8 137 42.3
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 7.2e-24 114.8 137 42.3
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 7.2e-24 114.8 140 43.6
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 7.2e-24 114.8 139 42.4
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 9.4e-24 114.4 126 46.0
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.2e-23 114.0 143 41.3
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 1.6e-23 113.6 126 45.2
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 4.7e-23 112.1 142 41.5
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 6.1e-23 111.7 126 42.1
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.8e-22 110.2 140 42.1
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 2.0e-21 106.7 160 36.9
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 4.4e-21 105.5 134 41.8
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 9.7e-21 104.4 74 62.2
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.2e-20 103.2 66 69.7
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 2.8e-20 102.8 64 71.9
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.8e-20 102.8 62 72.6
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 4.8e-20 102.1 95 56.8
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 3.1e-19 99.4 154 37.7
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 7.0e-19 98.2 155 36.8
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 7.0e-19 98.2 87 49.4
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.2e-18 97.4 137 42.3
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.7e-18 96.3 136 41.2
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.5e-18 95.9 150 39.3
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 7.7e-18 94.7 92 51.1
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 5.5e-16 88.6 110 43.6
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.2e-15 87.4 144 34.0
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 2.1e-15 86.7 104 48.1
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 4.7e-15 85.5 141 39.0
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 8.8e-14 81.3 119 39.5
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.5e-13 80.5 60 63.3
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 2.6e-13 79.7 104 36.5
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 3.4e-13 79.3 168 29.8
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 7.5e-13 78.2 61 55.7
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 6.3e-12 75.1 61 54.1
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.1e-11 74.3 44 68.2
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.5e-08 63.9 34 79.4
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 1.5e-08 63.9 34 79.4
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 5.5e-08 62.0 35 80.0
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.6e-07 60.5 94 42.6
SEGI_27828 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.6e-07 60.5 34 76.5
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.3e-06 56.6 112 33.0
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 3.0e-06 56.2 35 62.9


User provided reference genes

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