Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20899 Sequoiadendron giganteum HOM05D029660 ORTHO05D037568 0.0e+00 1146.3 738 100.0
SEGI_04010 Sequoiadendron giganteum HOM05D029660 ORTHO05D037568 3.9e-129 466.5 626 51.9
SEGI_05201 Sequoiadendron giganteum HOM05D029660 ORTHO05D037568 3.2e-91 340.5 582 51.0
SEGI_02346 Sequoiadendron giganteum HOM05D001759 ORTHO05D014681 7.6e-16 90.1 80 62.5
Oeu063070.2 Olea europaea HOM05D000538 ORTHO05D000614 7.3e-11 73.6 191 31.4
Rhsim13G0162300 Rhododendron simsii HOM05D000538 ORTHO05D000614 9.0e-09 66.6 184 29.9
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 1.2e-08 66.2 185 30.3
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 3.4e-08 64.7 157 32.5
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 4.5e-08 64.3 154 35.1
SalBow5G1539 Salvia bowleyana HOM05D000538 ORTHO05D000614 5.8e-08 63.9 212 30.7
Actinidia24277 Actinidia chinensis HOM05D000538 ORTHO05D000614 7.6e-08 63.5 175 32.6
Ciclev10011975m.g Citrus clementina HOM05D000538 ORTHO05D000614 7.6e-08 63.5 113 38.1
Cfa016408 Carpinus fangiana HOM05D000538 ORTHO05D000614 1.3e-07 62.8 121 33.9
Lalb_Chr05g0228411 Lupinus albus HOM05D000538 ORTHO05D000614 1.7e-07 62.4 180 33.9
SalBow6G4402 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.7e-07 62.4 201 28.9
SalBow6G5108 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.7e-07 62.4 201 28.9
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 2.2e-07 62.0 150 31.3
PSO339G1009 Papaver somniferum HOM05D000538 ORTHO05D000614 2.2e-07 62.0 205 27.3
Rhsim06G0156400 Rhododendron simsii HOM05D008818 ORTHO05D010237 2.2e-07 62.0 170 34.7
SGA_v2.0_scaffold12G06174 Striga asiatica HOM05D000538 ORTHO05D000614 2.2e-07 62.0 196 31.6
ATR0753G052 Amborella trichopoda HOM05D000538 ORTHO05D010421 2.9e-07 61.6 118 33.9
CAN.G86.22 Capsicum annuum HOM05D000538 ORTHO05D000614 3.8e-07 61.2 171 31.6
HanXRQChr03g0087661 Helianthus annuus HOM05D000538 ORTHO05D000614 3.8e-07 61.2 111 34.2
Cpa.g.sc264.16 Carica papaya HOM05D000538 ORTHO05D000614 4.9e-07 60.8 113 27.4
CAN.G857.7 Capsicum annuum HOM05D000538 ORTHO05D000614 6.4e-07 60.5 146 36.3
CARHR219220 Cardamine hirsuta HOM05D000538 ORTHO05D000614 6.4e-07 60.5 128 33.6
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 6.4e-07 60.5 213 29.6
Prupe.3G046700 Prunus persica HOM05D002395 ORTHO05D000614 6.4e-07 60.5 191 28.3
unitig_0.g2465 Utricularia gibba HOM05D000538 ORTHO05D000614 6.4e-07 60.5 172 32.0
MSTRG.13164 Avicennia marina HOM05D000538 ORTHO05D000614 8.4e-07 60.1 191 28.3
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.1e-06 59.7 158 31.6
arahy.Tifrunner.gnm1.ann1.CHJC5X Arachis hypogaea HOM05D000538 ORTHO05D000614 1.1e-06 59.7 93 30.1
Haze_06686 Corylus avellana HOM05D000538 ORTHO05D000614 1.1e-06 59.7 155 29.0
Lj1g0015191 Lotus japonicus HOM05D000538 ORTHO05D000614 1.1e-06 59.7 93 30.1
Nn4g26474 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.1e-06 59.7 183 29.0
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 1.4e-06 59.3 152 30.3
Glyma.19G242600 Glycine max HOM05D000538 ORTHO05D000614 1.4e-06 59.3 93 30.1
Lsat_1_v5_gn_1_81901 Lactuca sativa HOM05D000538 ORTHO05D000614 1.4e-06 59.3 129 31.8
Aqoxy1G00856 Aquilegia oxysepala HOM05D000538 ORTHO05D000614 1.9e-06 58.9 138 32.6
Glyma.03G245200 Glycine max HOM05D000538 ORTHO05D000614 1.9e-06 58.9 93 30.1
Phvul.007G185400 Phaseolus vulgaris HOM05D000538 ORTHO05D000614 1.9e-06 58.9 107 29.9
Dinv10905 Davidia involucrata HOM05D000538 ORTHO05D000614 2.4e-06 58.5 179 32.4
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 2.4e-06 58.5 188 29.8
Lalb_Chr04g0261071 Lupinus albus HOM05D000538 ORTHO05D000614 2.4e-06 58.5 93 30.1
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 2.4e-06 58.5 152 30.9
FAN09G4736 Fragaria x ananassa HOM05D000538 ORTHO05D000614 3.2e-06 58.2 136 33.1
FAN14G0602 Fragaria x ananassa HOM05D000538 ORTHO05D000614 3.2e-06 58.2 179 29.6
Glyma.15G063300 Glycine max HOM05D000538 ORTHO05D000614 3.2e-06 58.2 122 35.2
Gohir.D01G028300 Gossypium hirsutum HOM05D000538 ORTHO05D000614 3.2e-06 58.2 188 31.4
Gorai.002G037800 Gossypium raimondii HOM05D000538 ORTHO05D000614 3.2e-06 58.2 188 31.4
Nitab4.5_0000660g0020 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.2e-06 58.2 122 32.0
THA.LOC104820088 Tarenaya hassleriana HOM05D000538 ORTHO05D000614 3.2e-06 58.2 95 31.6
CAN.G134.173 Capsicum annuum HOM05D000538 ORTHO05D000614 4.2e-06 57.8 117 30.8
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 4.2e-06 57.8 213 29.6
FvH4_6g43700 Fragaria vesca HOM05D000538 ORTHO05D000614 4.2e-06 57.8 178 29.8
Glyma.20G228500 Glycine max HOM05D000538 ORTHO05D000614 4.2e-06 57.8 107 29.0
Nn1g03725 Nelumbo nucifera HOM05D000538 ORTHO05D000614 4.2e-06 57.8 192 29.7
Carub.0004s0072 Capsella rubella HOM05D000538 ORTHO05D000614 5.4e-06 57.4 164 29.9
Ca_09404_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 5.4e-06 57.4 125 30.4
Ca_30163_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 5.4e-06 57.4 125 30.4
COL.COLO4_13007 Corchorus olitorius HOM05D000538 ORTHO05D000614 5.4e-06 57.4 149 26.2
Prupe.6G338800 Prunus persica HOM05D000538 ORTHO05D000614 5.4e-06 57.4 97 32.0
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 5.4e-06 57.4 146 31.5
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 7.1e-06 57.0 215 29.8
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 7.1e-06 57.0 194 30.9
Lalb_Chr15g0076911 Lupinus albus HOM05D000538 ORTHO05D000614 7.1e-06 57.0 93 29.0
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 7.1e-06 57.0 173 31.2
Phvul.006G099400 Phaseolus vulgaris HOM05D000538 ORTHO05D000614 7.1e-06 57.0 91 29.7
Psat6g147280 Pisum sativum HOM05D000538 ORTHO05D000614 7.1e-06 57.0 136 30.9
SalBow1G6852 Salvia bowleyana HOM05D000538 ORTHO05D000614 7.1e-06 57.0 184 28.8
SGA_v2.0_scaffold52G19023 Striga asiatica HOM05D000538 ORTHO05D000614 7.1e-06 57.0 126 30.2
SGA_v2.0_scaffold52G19080 Striga asiatica HOM05D000538 ORTHO05D000614 7.1e-06 57.0 126 30.2
VMungo0720G1181 Vigna mungo HOM05D000538 ORTHO05D000614 7.1e-06 57.0 107 29.0
Actinidia05541 Actinidia chinensis HOM05D000538 ORTHO05D000614 9.3e-06 56.6 153 30.7
Aa31LG11G8790 Aethionema arabicum HOM05D000538 ORTHO05D000614 9.3e-06 56.6 105 29.5
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 9.3e-06 56.6 165 33.3
HanXRQChr01g0019011 Helianthus annuus HOM05D000538 ORTHO05D000614 9.3e-06 56.6 178 31.5
MBI18_g24145_MAGBIO Magnolia biondii HOM05D000538 ORTHO05D000614 9.3e-06 56.6 106 29.2
Psat3g008360 Pisum sativum HOM05D000538 ORTHO05D000614 9.3e-06 56.6 102 30.4
SEGI_01038 Sequoiadendron giganteum HOM05D031155 ORTHO05D030604 9.3e-06 56.6 111 27.0
TPR.G6965 Trifolium pratense HOM05D000538 ORTHO05D000614 9.3e-06 56.6 126 29.4


User provided reference genes

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