Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.8e-156 554.7 260 100.0
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 7.1e-78 294.7 135 100.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 4.5e-64 248.8 194 57.7
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 1.3e-63 247.3 192 59.4
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 1.1e-62 244.2 201 57.2
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.5e-62 243.0 178 63.5
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 4.6e-61 238.8 188 59.6
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 2.3e-60 236.5 190 58.4
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 2.3e-60 236.5 201 54.7
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 3.9e-60 235.7 247 48.2
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 5.1e-60 235.3 211 54.5
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.5e-59 233.8 196 58.7
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 3.3e-59 232.6 192 58.9
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 5.7e-59 231.9 260 46.5
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 9.7e-59 231.1 228 52.6
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 9.7e-59 231.1 237 50.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.4e-57 227.3 184 59.2
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 1.8e-57 226.9 222 50.9
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.8e-57 226.9 187 58.8
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.4e-57 226.5 193 55.4
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 2.4e-57 226.5 192 55.2
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 3.1e-57 226.1 191 56.0
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 3.1e-57 226.1 252 49.6
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 3.1e-57 226.1 183 58.5
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 4.1e-57 225.7 186 60.2
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 6.9e-57 224.9 184 59.2
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 6.9e-57 224.9 208 52.9
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 6.9e-57 224.9 178 60.1
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 9.1e-57 224.6 214 53.7
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 9.1e-57 224.6 193 57.0
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 2.0e-56 223.4 173 61.3
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 2.0e-56 223.4 209 54.5
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.9e-56 221.9 209 54.5
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 5.9e-56 221.9 217 51.2
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 7.7e-56 221.5 209 54.5
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 7.7e-56 221.5 201 55.2
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 7.7e-56 221.5 230 50.0
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 7.7e-56 221.5 202 55.0
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.0e-55 221.1 233 51.5
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.3e-55 220.7 193 52.3
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.3e-55 220.7 191 55.5
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 1.7e-55 220.3 243 47.7
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 2.9e-55 219.5 203 54.7
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.9e-55 219.5 189 55.0
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 2.9e-55 219.5 215 51.6
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 2.9e-55 219.5 187 58.3
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 3.8e-55 219.2 229 49.8
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.8e-55 219.2 171 59.1
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 5.0e-55 218.8 201 54.7
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 5.0e-55 218.8 194 55.7
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 5.0e-55 218.8 176 56.8
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 6.5e-55 218.4 198 52.0
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.9e-54 216.9 239 49.8
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.9e-54 216.9 193 54.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 2.5e-54 216.5 198 55.1
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 3.2e-54 216.1 194 53.6
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.2e-54 216.1 189 55.6
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 4.2e-54 215.7 186 58.1
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 5.5e-54 215.3 181 54.1
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 7.2e-54 214.9 198 54.5
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 2.1e-53 213.4 230 47.8
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.7e-53 213.0 239 49.0
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 2.7e-53 213.0 190 52.6
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 3.6e-53 212.6 170 58.2
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 6.1e-53 211.8 170 57.6
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 6.1e-53 211.8 174 54.6
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.0e-52 211.1 234 49.6
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 1.8e-52 210.3 182 54.9
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.8e-52 210.3 236 48.3
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 3.0e-52 209.5 184 51.1
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 3.9e-52 209.1 239 48.1
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 5.2e-52 208.8 234 49.1
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.1e-51 207.6 196 53.6
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.5e-51 207.2 234 48.3
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 9.7e-51 204.5 241 46.9
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.3e-50 204.1 243 47.7
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.2e-50 203.4 187 56.7
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 3.7e-50 202.6 176 57.4
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.4e-49 200.7 169 56.2
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 9.1e-49 198.0 181 54.1
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.2e-48 197.6 191 52.4
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.0e-47 194.5 188 54.8
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.7e-47 193.7 143 62.9
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 1.8e-44 183.7 261 39.5
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 3.0e-44 183.0 159 57.2
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 2.0e-43 180.3 180 52.8
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 8.5e-39 164.9 132 59.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.5e-38 163.3 114 64.0
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.2e-29 134.4 115 55.7
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.4e-28 131.0 125 55.2
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 2.2e-26 123.6 89 61.8
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.2e-26 123.6 117 53.0
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.5e-22 110.9 162 38.3
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 7.5e-19 98.6 115 45.2
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 4.1e-17 92.8 132 46.2
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 6.0e-16 89.0 79 51.9
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.2e-08 64.7 63 52.4
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 6.6e-07 58.9 70 48.6
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 1.9e-06 57.4 59 47.5


User provided reference genes

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