Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20843 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 1.4e-53 212.6 102 100.0
SEGI_40684 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 1.4e-53 212.6 102 100.0
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 2.5e-26 122.1 82 73.2
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 4.2e-26 121.3 83 69.9
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 5.5e-26 120.9 82 73.2
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 9.5e-26 120.2 82 73.2
SGA_v2.0_scaffold1G00640 Striga asiatica HOM05D004940 ORTHO05D007805 9.5e-26 120.2 82 72.0
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 2.1e-25 119.0 82 70.7
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 3.6e-25 118.2 82 69.5
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 3.6e-25 118.2 82 70.7
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 3.6e-25 118.2 82 70.7
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 3.6e-25 118.2 82 72.0
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 66.0
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 66.0
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
COL.COLO4_36581 Corchorus olitorius HOM05D004940 ORTHO05D007805 4.7e-25 117.9 82 73.2
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 4.7e-25 117.9 82 70.7
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 4.7e-25 117.9 94 67.0
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 4.7e-25 117.9 82 70.7
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 6.1e-25 117.5 94 67.0
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 6.1e-25 117.5 94 66.0
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 6.1e-25 117.5 94 66.0
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 6.1e-25 117.5 94 66.0
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 6.1e-25 117.5 82 70.7
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 6.1e-25 117.5 82 72.0
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 6.1e-25 117.5 81 71.6
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 6.1e-25 117.5 82 72.0
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 8.0e-25 117.1 82 73.2
MELO3C012862.2 Cucumis melo HOM05D004940 ORTHO05D007805 8.0e-25 117.1 82 73.2
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 8.0e-25 117.1 82 73.2
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 8.0e-25 117.1 82 72.0
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 8.0e-25 117.1 82 69.5
DCAR_018506 Daucus carota HOM05D004940 ORTHO05D007805 1.0e-24 116.7 82 70.7
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 1.0e-24 116.7 82 72.0
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 1.0e-24 116.7 81 69.1
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 1.8e-24 115.9 82 70.7
Atru.chr5.1796 Acer truncatum HOM05D004940 ORTHO05D007805 1.8e-24 115.9 82 70.7
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 1.8e-24 115.9 82 70.7
HPP92_012807 Vanilla planifolia HOM05D004940 ORTHO05D007805 1.8e-24 115.9 82 72.0
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 2.3e-24 115.5 82 70.7
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 2.3e-24 115.5 82 70.7
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 70.7
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 67.1
Gohir.A08G045700 Gossypium hirsutum HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 70.7
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 70.7
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 70.7
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 72.0
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 3.0e-24 115.2 82 70.7
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 4.0e-24 114.8 82 72.0
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 4.0e-24 114.8 82 69.5
Peaxi162Scf00415g00416 Petunia axillaris HOM05D004940 ORTHO05D007805 4.0e-24 114.8 82 69.5
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 5.2e-24 114.4 82 69.5
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 5.2e-24 114.4 82 69.5
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 5.2e-24 114.4 82 70.7
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 6.8e-24 114.0 82 65.9
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 8.9e-24 113.6 82 69.5
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 8.9e-24 113.6 82 68.3
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 8.9e-24 113.6 82 68.3
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 8.9e-24 113.6 82 69.5
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 69.5
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 70.7
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 1.2e-23 113.2 96 61.5
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 70.7
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 69.5
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 68.3
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 70.7
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 1.2e-23 113.2 82 68.3
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 1.5e-23 112.8 82 68.3
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 2.0e-23 112.5 82 69.5
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 2.0e-23 112.5 83 62.7
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 2.0e-23 112.5 62 82.3
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 2.6e-23 112.1 82 70.7
Lj1C71G15 Lonicera japonica HOM05D004940 ORTHO05D007805 2.6e-23 112.1 82 68.3
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 2.6e-23 112.1 82 70.7
Prupe.8G218700 Prunus persica HOM05D004940 ORTHO05D007805 2.6e-23 112.1 82 67.1
SHI09716 Sapria himalayana HOM05D004940 ORTHO05D000023 2.6e-23 112.1 82 68.3
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 2.6e-23 112.1 82 68.3
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 3.4e-23 111.7 82 68.3
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 3.4e-23 111.7 82 68.3
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 3.4e-23 111.7 65 78.5
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 4.4e-23 111.3 82 67.1
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 4.4e-23 111.3 82 67.1
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 5.7e-23 110.9 82 67.1
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 5.7e-23 110.9 82 65.9
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 7.5e-23 110.5 62 79.0
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 7.5e-23 110.5 62 79.0
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 7.5e-23 110.5 82 63.4
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 7.5e-23 110.5 82 68.3
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 7.5e-23 110.5 82 68.3
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 9.8e-23 110.2 82 68.3
PSO832G4005 Papaver somniferum HOM05D004940 ORTHO05D007805 9.8e-23 110.2 62 80.6
CDE01G0548 Ceratophyllum demersum HOM05D004940 ORTHO05D007805 1.3e-22 109.8 82 65.9
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 1.3e-22 109.8 62 79.0
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 2.2e-22 109.0 102 54.9
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 2.2e-22 109.0 82 67.1
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 2.2e-22 109.0 82 67.1
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 4.9e-22 107.8 82 65.9
Manes.13G037500 Manihot esculenta HOM05D004940 ORTHO05D007805 6.3e-22 107.5 82 65.9
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 8.3e-22 107.1 82 65.9
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 1.4e-21 106.3 82 64.6
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 1.4e-21 106.3 81 63.0
Lj1A78G31 Lonicera japonica HOM05D004940 ORTHO05D007805 1.8e-21 105.9 62 75.8
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 2.0e-20 102.4 82 64.6
SalBow5G2300 Salvia bowleyana HOM05D004940 ORTHO05D007805 1.3e-19 99.8 56 82.1
Lj1C79G2 Lonicera japonica HOM05D004940 ORTHO05D003385 5.8e-15 84.3 45 80.0
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 3.9e-11 71.6 38 78.9
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 3.9e-11 71.6 38 78.9


User provided reference genes

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