Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20828 Sequoiadendron giganteum HOM05D005428 ORTHO05D006876 8.7e-84 313.5 153 100.0
MBI11_g34854_MAGBIO Magnolia biondii HOM05D005428 ORTHO05D006876 2.6e-19 99.4 57 82.5
SalBow3G1895 Salvia bowleyana HOM05D005428 ORTHO05D006876 1.3e-18 97.1 57 78.9
Cfa008373 Carpinus fangiana HOM05D005428 ORTHO05D006876 1.7e-18 96.7 57 78.9
Ciclev10004873m.g Citrus clementina HOM05D005428 ORTHO05D006876 1.7e-18 96.7 57 78.9
Lsat_1_v5_gn_5_72961 Lactuca sativa HOM05D005428 ORTHO05D006876 1.7e-18 96.7 54 81.5
Medtr1g075320 Medicago truncatula HOM05D005428 ORTHO05D006876 1.7e-18 96.7 57 78.9
ATR0665G589 Amborella trichopoda HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 80.7
MSTRG.24699 Avicennia marina HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 78.9
CiPaw.01G190000 Carya illinoinensis HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 78.9
Ca_09838_v3 Cicer arietinum L. HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 77.2
HanXRQChr12g0386131 Helianthus annuus HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 77.2
Lj5g0022725 Lotus japonicus HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 77.2
Lalb_Chr06g0169281 Lupinus albus HOM05D005428 ORTHO05D006876 2.2e-18 96.3 57 77.2
Aqoxy2G03568 Aquilegia oxysepala HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 77.2
Cpa.g.sc58.52 Carica papaya HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 78.9
Cc03_g04910 Coffea canephora HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 77.2
Duzib212G0361 Durio zibethinus HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 78.9
Migut.N00242 Erythranthe guttata HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 77.2
MD13G1207900 Malus domestica HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 78.9
Os12g0597500 Oryza sativa ssp. japonica HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 77.2
SGA_v2.0_scaffold79G25631 Striga asiatica HOM05D005428 ORTHO05D006876 2.9e-18 95.9 57 77.2
Ciclev10004875m.g Citrus clementina HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
Ciclev10007151m.g Citrus clementina HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
COL.COLO4_15798 Corchorus olitorius HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
Haze_11306 Corylus avellana HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
Haze_11309 Corylus avellana HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
Dinv29906 Davidia involucrata HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
Phvul.007G125750 Phaseolus vulgaris HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
QL06p015833 Quercus lobata HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
VMungo0720G3093 Vigna mungo HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
GSVIVG01018124001 Vitis vinifera HOM05D005428 ORTHO05D006876 3.7e-18 95.5 57 77.2
ECA233G3252 Erigeron canadensis HOM05D005428 ORTHO05D006876 4.9e-18 95.1 57 75.4
THA.LOC104801094 Tarenaya hassleriana HOM05D005428 ORTHO05D006876 4.9e-18 95.1 57 77.2
TWI09G0474 Tripterygium wilfordii HOM05D005428 ORTHO05D006876 4.9e-18 95.1 54 79.6
FvH4_4g02810 Fragaria vesca HOM05D005428 ORTHO05D006876 6.4e-18 94.7 57 77.2
FAN12G3785 Fragaria x ananassa HOM05D005428 ORTHO05D006876 6.4e-18 94.7 57 77.2
PSO210G3950 Papaver somniferum HOM05D005428 ORTHO05D006876 6.4e-18 94.7 57 77.2
Thecc.04G246600 Theobroma cacao HOM05D005428 ORTHO05D006876 6.4e-18 94.7 57 75.4
Zm00001eb030970 Zea mays HOM05D005428 ORTHO05D006876 6.4e-18 94.7 57 75.4
Duzib151G0442 Durio zibethinus HOM05D005428 ORTHO05D006876 8.3e-18 94.4 57 77.2
Glyma.20G205500 Glycine max HOM05D005428 ORTHO05D006876 8.3e-18 94.4 57 75.4
Lj6A657G48 Lonicera japonica HOM05D005428 ORTHO05D006876 8.3e-18 94.4 57 75.4
Manes.03G168500 Manihot esculenta HOM05D005428 ORTHO05D006876 8.3e-18 94.4 57 75.4
RcHm_v2.0_Chr4g0390681 Rosa chinensis HOM05D005428 ORTHO05D006876 8.3e-18 94.4 57 75.4
TAR365G0225 Trochodendron aralioides HOM05D005428 ORTHO05D006876 8.3e-18 94.4 57 75.4
CSS0003291 Camellia sinensis var. sinensis HOM05D005428 ORTHO05D006876 1.1e-17 94.0 57 77.2
CSS0012294 Camellia sinensis var. sinensis HOM05D005428 ORTHO05D006876 1.1e-17 94.0 57 77.2
CsaV3_3G012550 Cucumis sativus L. HOM05D005428 ORTHO05D006876 1.1e-17 94.0 57 75.4
DCAR_027281 Daucus carota HOM05D005428 ORTHO05D006876 1.1e-17 94.0 57 78.9
Eucgr.H03154 Eucalyptus grandis HOM05D005428 ORTHO05D006876 1.1e-17 94.0 57 75.4
Glyma.10G184900 Glycine max HOM05D005428 ORTHO05D006876 1.1e-17 94.0 54 77.8
Potri.010G076100 Populus trichocarpa HOM05D005428 ORTHO05D006876 1.1e-17 94.0 57 77.2
Hma1.2p1_1276F.1_g272180 Hydrangea macrophylla HOM05D005428 ORTHO05D006876 1.4e-17 93.6 57 77.2
Hma1.2p1_1276F.1_g272190 Hydrangea macrophylla HOM05D005428 ORTHO05D006876 1.4e-17 93.6 57 77.2
CARHR006240 Cardamine hirsuta HOM05D005428 ORTHO05D006876 1.9e-17 93.2 57 77.2
ClCG05G004570 Citrullus lanatus HOM05D005428 ORTHO05D006876 1.9e-17 93.2 57 75.4
Lalb_Chr21g0312281 Lupinus albus HOM05D005428 ORTHO05D006876 1.9e-17 93.2 57 75.4
Peaxi162Scf00813g00223 Petunia axillaris HOM05D005428 ORTHO05D006876 1.9e-17 93.2 57 75.4
CANSAT78G2122 Cannabis sativa HOM05D005428 ORTHO05D006876 2.4e-17 92.8 57 73.7
AUR62015461 Chenopodium quinoa HOM05D005428 ORTHO05D006876 2.4e-17 92.8 54 79.6
Nitab4.5_0000525g0250 Nicotiana tabacum HOM05D005428 ORTHO05D006876 2.4e-17 92.8 54 77.8
Nitab4.5_0001418g0050 Nicotiana tabacum HOM05D005428 ORTHO05D006876 2.4e-17 92.8 54 77.8
Prupe.1G031400 Prunus persica HOM05D005428 ORTHO05D006876 2.4e-17 92.8 57 73.7
vmacro08417 Vaccinium macrocarpon HOM05D005428 ORTHO05D006876 2.4e-17 92.8 60 71.7
Atru.BG.84.p Acer truncatum HOM05D005428 ORTHO05D006876 3.2e-17 92.4 54 75.9
AUR62002250 Chenopodium quinoa HOM05D005428 ORTHO05D006876 3.2e-17 92.4 54 79.6
HPP92_018494 Vanilla planifolia HOM05D005428 ORTHO05D006876 3.2e-17 92.4 52 80.8
HPP92_018496 Vanilla planifolia HOM05D005428 ORTHO05D006876 3.2e-17 92.4 52 80.8
AT5G43600 Arabidopsis thaliana HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
BcaC06g31687 Brassica carinata HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
BcaC06g34641 Brassica carinata HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
A06p47790 Brassica napus HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
C07p26210 Brassica napus HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
BolC7t43148H Brassica oleracea HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
BraA06t27649Z Brassica rapa HOM05D005428 ORTHO05D006876 4.1e-17 92.0 57 75.4
PGSC0003DMG400015115 Solanum tuberosum HOM05D005428 ORTHO05D006876 4.1e-17 92.0 54 77.8
Aa31LG5G3610 Aethionema arabicum HOM05D005428 ORTHO05D006876 5.4e-17 91.7 57 73.7
Ah.13g066060 Amaranthus hybridus HOM05D005428 ORTHO05D006876 5.4e-17 91.7 57 75.4
EL10Ac3g05890 Beta vulgaris HOM05D005428 ORTHO05D006876 5.4e-17 91.7 54 79.6
Sabra10G0032700 Salix brachista HOM05D005428 ORTHO05D006876 5.4e-17 91.7 57 75.4
Solyc09g083410.4 Solanum lycopersicum HOM05D005428 ORTHO05D006876 5.4e-17 91.7 54 75.9
Carub.0008s0503 Capsella rubella HOM05D005428 ORTHO05D006876 7.1e-17 91.3 57 73.7
CAN.G1007.11 Capsicum annuum HOM05D005428 ORTHO05D006876 7.1e-17 91.3 54 77.8
Nn1g02619 Nelumbo nucifera HOM05D005428 ORTHO05D006876 7.1e-17 91.3 57 73.7
Rhsim04G0189900 Rhododendron simsii HOM05D005428 ORTHO05D006876 7.1e-17 91.3 57 73.7
Mapoly0068s0045 Marchantia polymorpha HOM05D005428 ORTHO05D006876 9.2e-17 90.9 57 77.2
Actinidia40084 Actinidia chinensis HOM05D005428 ORTHO05D006876 1.2e-16 90.5 57 73.7
Lsat_1_v5_gn_1_61800 Lactuca sativa HOM05D005428 ORTHO05D002547 1.2e-16 90.5 53 77.4
Sp2g08410 Schrenkiella parvula HOM05D005428 ORTHO05D006876 1.2e-16 90.5 57 73.7
Hund11855 Selenicereus undatus HOM05D005428 ORTHO05D006876 1.2e-16 90.5 57 75.4
Sopen09g032350 Solanum pennellii HOM05D005428 ORTHO05D006876 1.2e-16 90.5 54 74.1
RcHm_v2.0_Chr4g0390621 Rosa chinensis HOM05D005428 ORTHO05D006876 1.6e-16 90.1 51 78.4
CDE06G2174 Ceratophyllum demersum HOM05D005428 ORTHO05D006876 2.1e-16 89.7 57 73.7
Gohir.A09G057600 Gossypium hirsutum HOM05D005428 ORTHO05D006876 2.1e-16 89.7 57 71.9
unitig_46.g18501 Utricularia gibba HOM05D005428 ORTHO05D006876 2.1e-16 89.7 52 80.8
AagrBONN_evm.TU.Sc2ySwM_228.2275 Anthoceros agrestis HOM05D005428 ORTHO05D006876 3.5e-16 89.0 57 77.2
AL8G16680 Arabidopsis lyrata HOM05D005428 ORTHO05D006876 4.6e-16 88.6 57 73.7
PGR004G1836 Punica granatum HOM05D005428 ORTHO05D006876 4.6e-16 88.6 57 70.2
Gorai.006G070400 Gossypium raimondii HOM05D005428 ORTHO05D006876 6.0e-16 88.2 57 70.2
Thhalv10003195m.g Eutrema salsugineum HOM05D005428 ORTHO05D006876 7.8e-16 87.8 57 73.7
Gohir.D09G056800 Gossypium hirsutum HOM05D005428 ORTHO05D006876 1.7e-15 86.7 57 68.4
Sed0003134 Sechium edule HOM05D005428 ORTHO05D006876 1.7e-15 86.7 57 70.2
Pp3c9_12590 Physcomitrium patens HOM05D005428 ORTHO05D006876 3.0e-15 85.9 52 78.8
CBR_g40439 Chara braunii HOM05D005428 ORTHO05D006876 4.3e-14 82.0 57 71.9
Cre06.g276700 Chlamydomonas reinhardtii HOM05D005428 ORTHO05D006876 4.7e-13 78.6 54 68.5
SMO358G0475 Selaginella moellendorffii HOM05D005428 ORTHO05D006876 6.2e-13 78.2 52 71.2
arahy.Tifrunner.gnm1.ann1.562L79 Arachis hypogaea HOM05D005428 ORTHO05D006876 6.8e-12 74.7 40 80.0
arahy.Tifrunner.gnm1.ann1.WBEP1R Arachis hypogaea HOM05D005428 ORTHO05D006876 6.8e-12 74.7 40 80.0
AUR62023832 Chenopodium quinoa HOM05D005428 ORTHO05D006876 2.0e-11 73.2 52 69.2
CBR_g4812 Chara braunii HOM05D005428 ORTHO05D006876 4.4e-11 72.0 57 59.6
Psat6g125320 Pisum sativum HOM05D005428 ORTHO05D006876 1.0e-07 60.8 37 81.1
MCO01G069 Micromonas commoda HOM05D005428 ORTHO05D006876 1.3e-07 60.5 52 55.8
Sc19g0002030 Simmondsia chinensis HOM05D005428 ORTHO05D006876 1.3e-07 60.5 39 74.4
MELO3C006466.2 Cucumis melo HOM05D005428 ORTHO05D006876 1.7e-07 60.1 49 61.2
Oeu032589.1 Olea europaea HOM05D005428 ORTHO05D006876 8.6e-07 57.8 38 76.3
unitig_47.g30761 Utricularia gibba HOM05D000453 ORTHO05D006876 1.5e-06 57.0 32 87.5
CAN.G1305.29 Capsicum annuum HOM05D005428 ORTHO05D006876 4.3e-06 55.5 34 79.4
Lsat_1_v5_gn_6_21080 Lactuca sativa HOM05D005428 ORTHO05D000918 4.3e-06 55.5 38 68.4


User provided reference genes

Program Settings