Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20794 Sequoiadendron giganteum HOM05D012287 ORTHO05D000591 2.5e-113 412.1 216 100.0
SEGI_06846 Sequoiadendron giganteum HOM05D012287 ORTHO05D000591 5.9e-70 268.1 187 75.9
SEGI_35457 Sequoiadendron giganteum HOM05D012287 ORTHO05D000591 9.5e-68 260.8 186 73.7
SEGI_25411 Sequoiadendron giganteum HOM05D012287 ORTHO05D000591 2.0e-65 253.1 187 71.1
SEGI_39488 Sequoiadendron giganteum HOM05D012287 ORTHO05D387008 1.0e-61 240.7 186 71.5
SEGI_19707 Sequoiadendron giganteum HOM05D012287 ORTHO05D000591 8.3e-56 221.1 146 79.5
SEGI_15557 Sequoiadendron giganteum HOM05D012287 ORTHO05D386807 8.6e-45 184.5 205 53.7
SEGI_17584 Sequoiadendron giganteum HOM05D012287 ORTHO05D385710 1.4e-23 114.0 150 49.3
SEGI_00637 Sequoiadendron giganteum HOM05D012287 ORTHO05D387245 5.3e-18 95.5 134 47.8
SEGI_01340 Sequoiadendron giganteum HOM05D012287 ORTHO05D000001 5.3e-18 95.5 61 77.0
SEGI_17497 Sequoiadendron giganteum HOM05D012287 ORTHO05D000001 5.3e-18 95.5 61 77.0
SEGI_27839 Sequoiadendron giganteum HOM05D012287 ORTHO05D384690 1.0e-16 91.3 142 43.0
SEGI_41145 Sequoiadendron giganteum HOM05D012287 ORTHO05D386239 3.9e-13 79.3 172 33.1
Hma1.2p1_1909F.1_g307230 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 6.9e-10 68.6 154 32.5
ECA276G0001 Erigeron canadensis HOM05D000454 ORTHO05D000591 3.4e-09 66.2 185 28.6
HanXRQChr07g0200841 Helianthus annuus HOM05D000454 ORTHO05D000591 4.5e-09 65.9 171 28.7
Aqoxy2G01967 Aquilegia oxysepala HOM05D000454 ORTHO05D000591 5.9e-09 65.5 185 29.7
SalBow4G0296 Salvia bowleyana HOM05D000454 ORTHO05D000591 5.9e-09 65.5 185 30.3
SalBow6G1322 Salvia bowleyana HOM05D000454 ORTHO05D000591 7.6e-09 65.1 183 27.9
QL08p057731 Quercus lobata HOM05D000454 ORTHO05D000591 1.0e-08 64.7 183 27.9
Hma1.2p1_0207F.1_g087890 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.3e-08 64.3 183 28.4
Solyc05g054830.3 Solanum lycopersicum HOM05D000454 ORTHO05D000591 1.3e-08 64.3 183 28.4
Sopen05g033300 Solanum pennellii HOM05D000454 ORTHO05D000591 1.3e-08 64.3 183 28.4
TWI74G1228 Tripterygium wilfordii HOM05D000454 ORTHO05D000591 1.3e-08 64.3 182 26.9
TAR623G1562 Trochodendron aralioides HOM05D000454 ORTHO05D000591 1.3e-08 64.3 180 28.3
CsaV3_5G026170 Cucumis sativus L. HOM05D000454 ORTHO05D000591 1.7e-08 63.9 183 27.9
DCAR_027692 Daucus carota HOM05D000454 ORTHO05D000591 2.2e-08 63.5 181 28.7
Eucgr.A01217 Eucalyptus grandis HOM05D000454 ORTHO05D000591 2.2e-08 63.5 136 30.9
Lsat_1_v5_gn_2_116301 Lactuca sativa HOM05D000454 ORTHO05D000591 2.2e-08 63.5 185 28.1
Migut.J00385 Erythranthe guttata HOM05D000454 ORTHO05D000591 2.9e-08 63.2 183 30.1
Hma1.2p1_0111F.1_g053270 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 2.9e-08 63.2 185 29.2
Lj8C91T8 Lonicera japonica HOM05D000454 ORTHO05D000591 2.9e-08 63.2 185 28.6
MSTRG.5700 Avicennia marina HOM05D000454 ORTHO05D000591 3.8e-08 62.8 183 28.4
CSS0032054 Camellia sinensis var. sinensis HOM05D000454 ORTHO05D000591 3.8e-08 62.8 183 28.4
CAN.G1602.5 Capsicum annuum HOM05D000454 ORTHO05D000591 3.8e-08 62.8 185 28.6
CiPaw.01G280600 Carya illinoinensis HOM05D000454 ORTHO05D000591 3.8e-08 62.8 183 27.9
AUR62035981 Chenopodium quinoa HOM05D000454 ORTHO05D000591 3.8e-08 62.8 146 30.8
Dinv35663 Davidia involucrata HOM05D000454 ORTHO05D000591 3.8e-08 62.8 185 29.2
ECA233G3132 Erigeron canadensis HOM05D000454 ORTHO05D000591 3.8e-08 62.8 183 27.9
MSTRG.8240 Avicennia marina HOM05D000454 ORTHO05D000591 5.0e-08 62.4 185 29.7
AUR62041629 Chenopodium quinoa HOM05D000454 ORTHO05D000591 5.0e-08 62.4 146 30.8
Migut.L01634 Erythranthe guttata HOM05D000454 ORTHO05D000591 5.0e-08 62.4 185 30.3
Eucgr.J01156 Eucalyptus grandis HOM05D000454 ORTHO05D000591 5.0e-08 62.4 185 28.6
Sed0013798 Sechium edule HOM05D000454 ORTHO05D000591 5.0e-08 62.4 202 28.2
PGSC0003DMG400023510 Solanum tuberosum HOM05D000454 ORTHO05D000591 5.0e-08 62.4 185 28.6
DCAR_015240 Daucus carota HOM05D000454 ORTHO05D000591 6.5e-08 62.0 181 27.6
HanXRQChr14g0457531 Helianthus annuus HOM05D000454 ORTHO05D000591 6.5e-08 62.0 185 28.1
Oeu034826.1 Olea europaea HOM05D000454 ORTHO05D000591 6.5e-08 62.0 185 29.2
Rhsim13G0205500 Rhododendron simsii HOM05D000454 ORTHO05D000591 6.5e-08 62.0 185 28.6
unitig_749.g14018 Utricularia gibba HOM05D000454 ORTHO05D000591 6.5e-08 62.0 183 29.0
CSS0013794 Camellia sinensis var. sinensis HOM05D000454 ORTHO05D000591 8.5e-08 61.6 185 29.2
Dinv37224 Davidia involucrata HOM05D000454 ORTHO05D000591 8.5e-08 61.6 183 27.9
Glyma.03G174400 Glycine max HOM05D000454 ORTHO05D000591 8.5e-08 61.6 136 32.4
CiPaw.02G179100 Carya illinoinensis HOM05D000454 ORTHO05D000591 1.1e-07 61.2 183 27.3
ClCG09G020270 Citrullus lanatus HOM05D000454 ORTHO05D000591 1.1e-07 61.2 183 27.3
COL.COLO4_10888 Corchorus olitorius HOM05D000454 ORTHO05D000591 1.1e-07 61.2 183 27.3
MELO3C025481.2 Cucumis melo HOM05D000454 ORTHO05D000591 1.1e-07 61.2 183 27.3
Glyma.19G175300 Glycine max HOM05D000454 ORTHO05D000591 1.1e-07 61.2 136 31.6
Lj1A930T85 Lonicera japonica HOM05D000454 ORTHO05D000591 1.1e-07 61.2 183 27.9
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 1.1e-07 61.2 192 27.6
Cc00_g28480 Coffea canephora HOM05D000454 ORTHO05D000591 1.4e-07 60.8 183 27.9
Lalb_Chr07g0186191 Lupinus albus HOM05D000454 ORTHO05D000591 1.4e-07 60.8 183 29.0
Manes.09G088600 Manihot esculenta HOM05D000454 ORTHO05D000591 1.4e-07 60.8 146 29.5
Rhsim13G0205200 Rhododendron simsii HOM05D000454 ORTHO05D000591 1.4e-07 60.8 185 28.1
Actinidia19742 Actinidia chinensis HOM05D000454 ORTHO05D000591 1.9e-07 60.5 180 29.4
ATR0759G006 Amborella trichopoda HOM05D000454 ORTHO05D000591 1.9e-07 60.5 185 28.6
Nitab4.5_0000914g0200 Nicotiana tabacum HOM05D000454 ORTHO05D000591 1.9e-07 60.5 185 28.1
PSO339G2484 Papaver somniferum HOM05D000454 ORTHO05D000591 1.9e-07 60.5 185 28.1
PSO384G0912 Papaver somniferum HOM05D000454 ORTHO05D000591 1.9e-07 60.5 185 28.1
C05p55470 Brassica napus HOM05D000454 ORTHO05D000591 2.5e-07 60.1 183 27.9
BolC5t34213H Brassica oleracea HOM05D000454 ORTHO05D000591 2.5e-07 60.1 183 27.9
CANSAT56G2532 Cannabis sativa HOM05D000454 ORTHO05D000591 2.5e-07 60.1 183 27.3
Cpa.g.sc1.313 Carica papaya HOM05D000454 ORTHO05D000591 2.5e-07 60.1 185 28.1
Phvul.001G171600 Phaseolus vulgaris HOM05D000454 ORTHO05D000591 2.5e-07 60.1 146 30.1
PGR044G1616 Punica granatum HOM05D000454 ORTHO05D000591 2.5e-07 60.1 183 27.3
Sed0019944 Sechium edule HOM05D000454 ORTHO05D000591 2.5e-07 60.1 183 27.9
GSVIVG01025592001 Vitis vinifera HOM05D000454 ORTHO05D000591 2.5e-07 60.1 202 26.7
Duzib093G0616 Durio zibethinus HOM05D000454 ORTHO05D000591 3.2e-07 59.7 183 29.0
Lj2C102T10 Lonicera japonica HOM05D000454 ORTHO05D000591 3.2e-07 59.7 170 27.1
Sabra06G0165600 Salix brachista HOM05D000454 ORTHO05D000591 3.2e-07 59.7 183 28.4
unitig_578.g15709 Utricularia gibba HOM05D000454 ORTHO05D000591 3.2e-07 59.7 189 28.6
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 3.2e-07 59.7 180 26.7
Aqoxy4G03071 Aquilegia oxysepala HOM05D000454 ORTHO05D000591 4.2e-07 59.3 132 30.3
Carub.0003s1172 Capsella rubella HOM05D000454 ORTHO05D000591 4.2e-07 59.3 183 27.9
Gohir.A06G177700 Gossypium hirsutum HOM05D000454 ORTHO05D000591 4.2e-07 59.3 183 26.8
Gohir.D06G173566 Gossypium hirsutum HOM05D000454 ORTHO05D000591 4.2e-07 59.3 183 26.8
Gorai.010G202900 Gossypium raimondii HOM05D000454 ORTHO05D000591 4.2e-07 59.3 183 26.8
THA.LOC104799369 Tarenaya hassleriana HOM05D000454 ORTHO05D000591 4.2e-07 59.3 183 27.9
HPP92_019346 Vanilla planifolia HOM05D000068 ORTHO05D004505 4.2e-07 59.3 180 26.7
Actinidia02991 Actinidia chinensis HOM05D000454 ORTHO05D000591 5.5e-07 58.9 185 28.1
EL10Ac2g03479 Beta vulgaris HOM05D000454 ORTHO05D000591 5.5e-07 58.9 187 28.9
CSS0000347 Camellia sinensis var. sinensis HOM05D000454 ORTHO05D000591 5.5e-07 58.9 183 27.3
CSS0002369 Camellia sinensis var. sinensis HOM05D000454 ORTHO05D000591 5.5e-07 58.9 183 27.3
Medtr7g100430 Medicago truncatula HOM05D000454 ORTHO05D000591 5.5e-07 58.9 173 29.5
Phvul.002G242500 Phaseolus vulgaris HOM05D000454 ORTHO05D000591 5.5e-07 58.9 147 30.6
Sp3g10550 Schrenkiella parvula HOM05D000454 ORTHO05D000591 5.5e-07 58.9 183 27.3
THA.LOC104809884 Tarenaya hassleriana HOM05D000454 ORTHO05D000591 5.5e-07 58.9 183 26.8
HPP92_001688 Vanilla planifolia HOM05D000454 ORTHO05D000591 5.5e-07 58.9 185 28.6
AL3G24010 Arabidopsis lyrata HOM05D000454 ORTHO05D000591 7.2e-07 58.5 183 27.9
AT3G12360 Arabidopsis thaliana HOM05D000454 ORTHO05D000591 7.2e-07 58.5 183 27.9
CARHR086890 Cardamine hirsuta HOM05D000454 ORTHO05D000591 7.2e-07 58.5 183 27.9
Haze_16979 Corylus avellana HOM05D000454 ORTHO05D000591 7.2e-07 58.5 183 26.2
Duzib114G0349 Durio zibethinus HOM05D000454 ORTHO05D000591 7.2e-07 58.5 183 26.8
Thecc.10G060100 Theobroma cacao HOM05D000454 ORTHO05D000591 7.2e-07 58.5 183 26.8
vmacro07134 Vaccinium macrocarpon HOM05D000454 ORTHO05D000591 7.2e-07 58.5 167 27.5
Zm00001eb148670 Zea mays HOM05D000454 ORTHO05D000591 7.2e-07 58.5 185 27.6
Dinv25945 Davidia involucrata HOM05D000454 ORTHO05D000591 9.3e-07 58.2 181 28.2
Duzib106G0089 Durio zibethinus HOM05D000454 ORTHO05D000591 9.3e-07 58.2 185 27.6
Duzib106G0382 Durio zibethinus HOM05D000454 ORTHO05D000591 9.3e-07 58.2 185 27.6
MD01G1118500 Malus domestica HOM05D000454 ORTHO05D000591 9.3e-07 58.2 183 26.8
SEGI_31740 Sequoiadendron giganteum HOM05D000454 ORTHO05D002637 9.3e-07 58.2 134 31.3
Ah.10g033300 Amaranthus hybridus HOM05D000454 ORTHO05D000591 1.2e-06 57.8 185 27.0
BcaB04g21082 Brassica carinata HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 27.3
BcaC09g48233 Brassica carinata HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 27.3
A05p37040 Brassica napus HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 27.3
C01p52900 Brassica napus HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 27.3
BolC1t05227H Brassica oleracea HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 27.3
Cpa.g.sc114.11 Carica papaya HOM05D000454 ORTHO05D000591 1.2e-06 57.8 170 28.8
CDE02G4292 Ceratophyllum demersum HOM05D000454 ORTHO05D000591 1.2e-06 57.8 181 28.2
CDE08G0807 Ceratophyllum demersum HOM05D000454 ORTHO05D000591 1.2e-06 57.8 178 25.3
Duzib128G1581 Durio zibethinus HOM05D000454 ORTHO05D000591 1.2e-06 57.8 181 26.0
Thhalv10020362m.g Eutrema salsugineum HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 27.3
Gohir.A05G352100 Gossypium hirsutum HOM05D000454 ORTHO05D000591 1.2e-06 57.8 183 26.8
Lj3A974T64 Lonicera japonica HOM05D000454 ORTHO05D000591 1.2e-06 57.8 207 25.6
Lj1g0014079 Lotus japonicus HOM05D000454 ORTHO05D000591 1.2e-06 57.8 163 29.4
Oeu050645.1 Olea europaea HOM05D000454 ORTHO05D000591 1.2e-06 57.8 154 29.2
CSS0022211 Camellia sinensis var. sinensis HOM05D000454 ORTHO05D000591 1.6e-06 57.4 185 27.0
Ca_08798_v3 Cicer arietinum L. HOM05D000454 ORTHO05D000591 1.6e-06 57.4 183 27.3
Cc06_g03180 Coffea canephora HOM05D000454 ORTHO05D000591 1.6e-06 57.4 202 26.7
Manes.07G107600 Manihot esculenta HOM05D000454 ORTHO05D000591 1.6e-06 57.4 185 27.6
Rhsim03G0128000 Rhododendron simsii HOM05D000454 ORTHO05D000591 1.6e-06 57.4 185 28.6
VMungo1383G3206 Vigna mungo HOM05D000454 ORTHO05D000591 1.6e-06 57.4 144 29.9
Lsat_1_v5_gn_8_18121 Lactuca sativa HOM05D000454 ORTHO05D000591 2.1e-06 57.0 186 25.8
MBI14_g35941_MAGBIO Magnolia biondii HOM05D000454 ORTHO05D000591 2.1e-06 57.0 185 27.0
Manes.10G038300 Manihot esculenta HOM05D000454 ORTHO05D000591 2.1e-06 57.0 185 27.0
PGR004G2631 Punica granatum HOM05D000454 ORTHO05D000591 2.1e-06 57.0 185 27.6
Hund22425 Selenicereus undatus HOM05D000454 ORTHO05D000591 2.1e-06 57.0 144 29.2
SGA_v2.0_scaffold94G28638 Striga asiatica HOM05D000454 ORTHO05D000591 2.1e-06 57.0 185 28.1
Actinidia38216 Actinidia chinensis HOM05D000454 ORTHO05D000591 2.7e-06 56.6 183 27.3
ClCG06G011640 Citrullus lanatus HOM05D000454 ORTHO05D000591 2.7e-06 56.6 185 27.0
FAN01G2019 Fragaria x ananassa HOM05D000454 ORTHO05D000591 2.7e-06 56.6 181 26.5
FAN03G2247 Fragaria x ananassa HOM05D000454 ORTHO05D000591 2.7e-06 56.6 181 26.5
Phvul.007G008900 Phaseolus vulgaris HOM05D000454 ORTHO05D000591 2.7e-06 56.6 185 27.6
Aa31sc153G70 Aethionema arabicum HOM05D000454 ORTHO05D000591 3.6e-06 56.2 183 26.8
CANSAT80G0837 Cannabis sativa HOM05D000454 ORTHO05D000591 3.6e-06 56.2 181 28.2
Glyma.20G241200 Glycine max HOM05D000454 ORTHO05D000591 3.6e-06 56.2 185 28.1
Gohir.D04G060800 Gossypium hirsutum HOM05D000454 ORTHO05D000591 3.6e-06 56.2 183 26.2
Gorai.012G067700 Gossypium raimondii HOM05D000454 ORTHO05D000591 3.6e-06 56.2 183 26.2
TPR.G36857 Trifolium pratense HOM05D000454 ORTHO05D000591 3.6e-06 56.2 173 28.9
TWI63G0750 Tripterygium wilfordii HOM05D000454 ORTHO05D000591 3.6e-06 56.2 185 27.6
TAR369G0509 Trochodendron aralioides HOM05D000454 ORTHO05D000591 3.6e-06 56.2 181 27.1
vmacro20104 Vaccinium macrocarpon HOM05D000454 ORTHO05D000591 3.6e-06 56.2 183 26.8
VMungo0720G3111 Vigna mungo HOM05D000454 ORTHO05D000591 3.6e-06 56.2 185 27.6
Zm00001eb397350 Zea mays HOM05D000454 ORTHO05D000591 3.6e-06 56.2 185 27.6
Ciclev10031031m.g Citrus clementina HOM05D000454 ORTHO05D000591 4.6e-06 55.8 185 27.0
Duzib128G0147 Durio zibethinus HOM05D000454 ORTHO05D000591 4.6e-06 55.8 201 26.9
Migut.F01512 Erythranthe guttata HOM05D000454 ORTHO05D000591 4.6e-06 55.8 183 26.2
Glyma.10G291900 Glycine max HOM05D000454 ORTHO05D000591 4.6e-06 55.8 185 28.1
Lsat_1_v5_gn_6_32980 Lactuca sativa HOM05D000454 ORTHO05D000591 4.6e-06 55.8 173 27.7
MD07G1186700 Malus domestica HOM05D000454 ORTHO05D000591 4.6e-06 55.8 183 26.2
Os03g0281000 Oryza sativa ssp. japonica HOM05D000454 ORTHO05D000591 4.6e-06 55.8 185 26.5
PSO339G4164 Papaver somniferum HOM05D000454 ORTHO05D000591 4.6e-06 55.8 181 27.1
PSO384G0410 Papaver somniferum HOM05D000454 ORTHO05D000591 4.6e-06 55.8 181 27.1
Psat3g047480 Pisum sativum HOM05D000454 ORTHO05D000591 4.6e-06 55.8 173 28.3
Psat6g238080 Pisum sativum HOM05D000454 ORTHO05D000591 4.6e-06 55.8 185 27.0
Potri.010G212700 Populus trichocarpa HOM05D000454 ORTHO05D000591 4.6e-06 55.8 185 26.5
THA.LOC104827307 Tarenaya hassleriana HOM05D000454 ORTHO05D000591 4.6e-06 55.8 123 30.1
ClCG04G008570 Citrullus lanatus HOM05D000454 ORTHO05D000591 6.1e-06 55.5 183 26.2
Sc20g0002390 Simmondsia chinensis HOM05D000454 ORTHO05D000591 6.1e-06 55.5 154 29.2
GSVIVG01032614001 Vitis vinifera HOM05D000454 ORTHO05D000591 6.1e-06 55.5 181 28.2
FAN10G0317 Fragaria x ananassa HOM05D000454 ORTHO05D000591 7.9e-06 55.1 181 26.0
Oeu016022.1 Olea europaea HOM05D000454 ORTHO05D000591 7.9e-06 55.1 183 26.2
Prupe.2G225600 Prunus persica HOM05D000454 ORTHO05D000591 7.9e-06 55.1 183 26.2
SEGI_33060 Sequoiadendron giganteum HOM05D000454 ORTHO05D002637 7.9e-06 55.1 152 30.9
TWI38G1649 Tripterygium wilfordii HOM05D000454 ORTHO05D000591 7.9e-06 55.1 198 24.2


User provided reference genes

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