Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20784 Sequoiadendron giganteum HOM05D024527 ORTHO05D005034 1.3e-117 426.4 220 100.0
SEGI_38522 Sequoiadendron giganteum HOM05D024527 ORTHO05D005034 1.7e-64 250.0 155 83.2
SEGI_32234 Sequoiadendron giganteum HOM05D003126 ORTHO05D005034 9.4e-63 244.2 155 83.9
SEGI_19517 Sequoiadendron giganteum HOM05D024527 ORTHO05D005034 4.5e-57 225.3 145 81.4
SEGI_07855 Sequoiadendron giganteum HOM05D024527 ORTHO05D005034 8.5e-56 221.1 135 84.4
SEGI_13079 Sequoiadendron giganteum HOM05D003126 ORTHO05D005034 1.2e-38 164.1 154 58.4
SEGI_31929 Sequoiadendron giganteum HOM05D000301 ORTHO05D000303 2.0e-20 103.6 97 59.8
SEGI_02850 Sequoiadendron giganteum HOM05D000031 ORTHO05D000030 6.4e-11 72.0 66 53.0
SEGI_05869 Sequoiadendron giganteum HOM05D000106 ORTHO05D000160 1.1e-10 71.2 85 44.7
SEGI_33629 Sequoiadendron giganteum HOM05D002586 ORTHO05D007009 1.2e-09 67.8 65 50.8
PSO384G4480 Papaver somniferum HOM05D003126 ORTHO05D005034 7.8e-09 65.1 152 32.2
PSO339G3182 Papaver somniferum HOM05D003126 ORTHO05D005034 1.0e-08 64.7 152 32.2
Prupe.2G010500 Prunus persica HOM05D003126 ORTHO05D005034 1.7e-08 63.9 148 35.8
SEGI_31294 Sequoiadendron giganteum HOM05D000018 ORTHO05D384235 1.7e-08 63.9 106 35.8
Nn1g00624 Nelumbo nucifera HOM05D003126 ORTHO05D005034 5.0e-08 62.4 149 34.9
Migut.N01475 Erythranthe guttata HOM05D003126 ORTHO05D005034 8.6e-08 61.6 96 38.5
MD07G1007800 Malus domestica HOM05D003126 ORTHO05D005034 8.6e-08 61.6 149 34.2
Nn1g00625 Nelumbo nucifera HOM05D003126 ORTHO05D005034 1.1e-07 61.2 149 34.2
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.1e-07 61.2 136 29.4
Cfa010743 Carpinus fangiana HOM05D003126 ORTHO05D005034 2.5e-07 60.1 148 33.8
Haze_03230 Corylus avellana HOM05D003126 ORTHO05D005034 2.5e-07 60.1 148 33.8
FvH4_7g00830 Fragaria vesca HOM05D003126 ORTHO05D005034 4.3e-07 59.3 147 32.7
FAN01G1724 Fragaria x ananassa HOM05D003126 ORTHO05D005034 5.6e-07 58.9 147 32.7
FAN03G0993 Fragaria x ananassa HOM05D003126 ORTHO05D005034 7.3e-07 58.5 147 32.7
FAN06G0385 Fragaria x ananassa HOM05D003126 ORTHO05D005034 7.3e-07 58.5 147 32.7
MSTRG.20596 Avicennia marina HOM05D003126 ORTHO05D005034 9.5e-07 58.2 115 39.1
MELO3C023966.2 Cucumis melo HOM05D003126 ORTHO05D005034 9.5e-07 58.2 150 35.3
Mapoly0177s0019 Marchantia polymorpha HOM05D003126 ORTHO05D005034 9.5e-07 58.2 124 36.3
Sabra16G0164800 Salix brachista HOM05D003126 ORTHO05D005034 9.5e-07 58.2 155 33.5
ClCG10G012470 Citrullus lanatus HOM05D003126 ORTHO05D005034 1.2e-06 57.8 150 37.3
TAR633G1448 Trochodendron aralioides HOM05D003126 ORTHO05D005034 1.2e-06 57.8 146 34.2
FAN10G2088 Fragaria x ananassa HOM05D003126 ORTHO05D005034 1.6e-06 57.4 147 32.7
HanXRQChr06g0185401 Helianthus annuus HOM05D003126 ORTHO05D005034 1.6e-06 57.4 154 30.5
CsaV3_3G032240 Cucumis sativus L. HOM05D003126 ORTHO05D005034 2.1e-06 57.0 148 35.1
Phvul.005G036300 Phaseolus vulgaris HOM05D003126 ORTHO05D005034 2.1e-06 57.0 149 34.2
QL04p005483 Quercus lobata HOM05D003126 ORTHO05D005034 2.8e-06 56.6 149 36.2
TAR636G3316 Trochodendron aralioides HOM05D003126 ORTHO05D005034 2.8e-06 56.6 155 32.9
GSVIVG01032066001 Vitis vinifera HOM05D003126 ORTHO05D005034 2.8e-06 56.6 146 33.6
Nn7g36179 Nelumbo nucifera HOM05D003126 ORTHO05D005034 3.6e-06 56.2 124 34.7
RcHm_v2.0_Chr1g0314991 Rosa chinensis HOM05D003126 ORTHO05D005034 3.6e-06 56.2 147 30.6
Gorai.004G036800 Gossypium raimondii HOM05D003126 ORTHO05D005034 4.7e-06 55.8 109 32.1
MBI01_g27625_MAGBIO Magnolia biondii HOM05D003126 ORTHO05D005034 4.7e-06 55.8 152 33.6
Gohir.D08G038300 Gossypium hirsutum HOM05D003126 ORTHO05D005034 6.2e-06 55.5 109 32.1
Oeu010350.1 Olea europaea HOM05D003126 ORTHO05D005034 6.2e-06 55.5 145 31.7
Potri.001G269200 Populus trichocarpa HOM05D003126 ORTHO05D005034 6.2e-06 55.5 146 33.6
SEGI_05426 Sequoiadendron giganteum HOM05D024527 ORTHO05D007009 6.2e-06 55.5 62 51.6
TWI73G1191 Tripterygium wilfordii HOM05D003126 ORTHO05D005034 6.2e-06 55.5 146 33.6
Glyma.15G272900 Glycine max HOM05D003126 ORTHO05D005034 8.1e-06 55.1 149 34.9
Lj9C630G6 Lonicera japonica HOM05D003126 ORTHO05D005034 8.1e-06 55.1 155 34.2
Sed0002072 Sechium edule HOM05D003126 ORTHO05D005034 8.1e-06 55.1 147 32.7
SGA_v2.0_scaffold95G28793 Striga asiatica HOM05D003126 ORTHO05D005034 8.1e-06 55.1 102 39.2
HPP92_015771 Vanilla planifolia HOM05D003126 ORTHO05D005034 8.1e-06 55.1 100 38.0


User provided reference genes

Program Settings