Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20762 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 1.2e-143 513.1 244 100.0
SEGI_21411 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 7.2e-40 168.3 179 54.7
SEGI_28596 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 2.7e-34 149.8 77 94.8
SEGI_04035 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 5.0e-33 145.6 79 88.6
SEGI_26295 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 2.0e-29 133.7 77 85.7
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 6.0e-26 122.1 77 75.3
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 1.3e-25 120.9 77 72.7
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 1.7e-25 120.6 77 72.7
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 2.3e-25 120.2 77 74.0
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 3.0e-25 119.8 82 68.3
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 3.0e-25 119.8 77 74.0
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 3.9e-25 119.4 110 54.5
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 5.0e-25 119.0 77 72.7
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 5.0e-25 119.0 77 72.7
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 6.6e-25 118.6 77 72.7
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 8.6e-25 118.2 77 74.0
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 8.6e-25 118.2 77 68.8
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 8.6e-25 118.2 77 72.7
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 8.6e-25 118.2 77 72.7
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 8.6e-25 118.2 77 71.4
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 8.6e-25 118.2 110 54.5
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 1.1e-24 117.9 96 62.5
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 1.1e-24 117.9 77 72.7
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 1.5e-24 117.5 77 71.4
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 1.5e-24 117.5 77 71.4
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 1.5e-24 117.5 77 71.4
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 1.5e-24 117.5 77 71.4
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 1.5e-24 117.5 110 53.6
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 1.5e-24 117.5 110 53.6
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 1.5e-24 117.5 77 71.4
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 1.9e-24 117.1 77 70.1
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 1.9e-24 117.1 77 71.4
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 2.5e-24 116.7 77 71.4
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 2.5e-24 116.7 77 71.4
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 2.5e-24 116.7 78 71.8
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 3.3e-24 116.3 77 70.1
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 4.3e-24 115.9 77 70.1
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 4.3e-24 115.9 77 70.1
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 4.3e-24 115.9 77 67.5
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 4.3e-24 115.9 77 70.1
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 4.3e-24 115.9 77 70.1
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 5.6e-24 115.5 77 70.1
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 5.6e-24 115.5 77 70.1
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 5.6e-24 115.5 77 70.1
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 7.3e-24 115.2 77 70.1
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 7.3e-24 115.2 77 70.1
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 7.3e-24 115.2 110 50.9
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 9.5e-24 114.8 77 70.1
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 9.5e-24 114.8 77 68.8
TPR.G18873 Trifolium pratense HOM05D003482 ORTHO05D004194 9.5e-24 114.8 77 68.8
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 9.5e-24 114.8 77 68.8
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 1.2e-23 114.4 77 70.1
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 1.2e-23 114.4 77 71.4
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 1.6e-23 114.0 110 50.0
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 1.6e-23 114.0 77 70.1
ClCG11G013930 Citrullus lanatus HOM05D003482 ORTHO05D004194 1.6e-23 114.0 77 67.5
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 1.6e-23 114.0 77 67.5
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 1.6e-23 114.0 110 52.7
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 1.6e-23 114.0 77 68.8
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 2.1e-23 113.6 75 68.0
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 2.1e-23 113.6 77 67.5
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 2.1e-23 113.6 110 51.8
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 2.1e-23 113.6 110 51.8
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 2.1e-23 113.6 110 51.8
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 2.1e-23 113.6 77 70.1
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 2.8e-23 113.2 77 68.8
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 2.8e-23 113.2 77 66.2
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 2.8e-23 113.2 110 51.8
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 3.6e-23 112.8 95 56.8
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 3.6e-23 112.8 77 67.5
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 3.6e-23 112.8 77 70.1
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 4.7e-23 112.5 77 70.1
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 4.7e-23 112.5 111 53.2
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 4.7e-23 112.5 77 66.2
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 6.2e-23 112.1 77 70.1
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 6.2e-23 112.1 77 68.8
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 1.1e-22 111.3 77 67.5
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 1.1e-22 111.3 80 68.8
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 1.1e-22 111.3 78 69.2
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 1.4e-22 110.9 77 64.9
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 1.4e-22 110.9 110 50.9
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.4e-22 110.9 77 68.8
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.4e-22 110.9 111 51.4
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 1.8e-22 110.5 77 68.8
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 1.8e-22 110.5 93 59.1
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 1.8e-22 110.5 77 66.2
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 1.8e-22 110.5 107 52.3
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 1.8e-22 110.5 77 66.2
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 1.8e-22 110.5 77 66.2
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 1.8e-22 110.5 77 68.8
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 3.1e-22 109.8 77 66.2
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 5.2e-22 109.0 77 66.2
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 5.2e-22 109.0 77 67.5
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 5.2e-22 109.0 110 48.2
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 5.2e-22 109.0 110 48.2
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 8.9e-22 108.2 78 62.8
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 1.2e-21 107.8 77 66.2
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 1.2e-21 107.8 110 50.0
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 2.0e-21 107.1 110 49.1
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 2.6e-21 106.7 78 64.1
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 2.6e-21 106.7 77 64.9
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 2.6e-21 106.7 110 50.0
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 3.4e-21 106.3 78 65.4
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 3.4e-21 106.3 74 67.6
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 4.4e-21 105.9 77 66.2
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 6.4e-20 102.1 79 59.5
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 1.1e-19 101.3 78 60.3
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 1.9e-19 100.5 77 59.7
Hund03270 Selenicereus undatus HOM05D003482 ORTHO05D004194 2.4e-19 100.1 78 65.4
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 4.1e-19 99.4 107 48.6
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 2.7e-18 96.7 77 58.4
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 3.5e-18 96.3 109 45.9
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 1.0e-17 94.7 77 57.1
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 2.3e-17 93.6 110 45.5
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 5.1e-17 92.4 77 61.0
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 2.5e-16 90.1 77 51.9
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 8.3e-12 75.1 54 59.3
Rhsim03G0037500 Rhododendron simsii HOM05D003482 ORTHO05D004194 9.5e-08 61.6 55 56.4
SEGI_03751 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.2e-07 58.9 44 63.6
SEGI_06130 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.2e-07 58.9 44 63.6
PSO755G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 8.9e-06 55.1 32 81.2


User provided reference genes

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