Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20701 Sequoiadendron giganteum HOM05D007525 ORTHO05D003398 8.3e-53 209.9 93 100.0
QL04p055069 Quercus lobata HOM05D007525 ORTHO05D003398 8.9e-31 136.7 66 81.8
CiPaw.01G065400 Carya illinoinensis HOM05D007525 ORTHO05D003398 4.4e-30 134.4 66 78.8
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 2.9e-29 131.7 66 77.3
Nn1g01647 Nelumbo nucifera HOM05D007525 ORTHO05D003398 3.7e-29 131.3 66 77.3
PGR042G3120 Punica granatum HOM05D007525 ORTHO05D003398 6.4e-29 130.6 66 80.3
TAR636G1192 Trochodendron aralioides HOM05D007525 ORTHO05D003398 6.4e-29 130.6 66 75.8
Cfa003884 Carpinus fangiana HOM05D007525 ORTHO05D003398 8.3e-29 130.2 66 78.8
CDE12G0297 Ceratophyllum demersum HOM05D007525 ORTHO05D003398 8.3e-29 130.2 64 81.2
Eucgr.E00102 Eucalyptus grandis HOM05D007525 ORTHO05D003398 1.4e-28 129.4 66 78.8
HPP92_021017 Vanilla planifolia HOM05D007525 ORTHO05D003398 2.4e-28 128.6 67 71.6
GSVIVG01026980001 Vitis vinifera HOM05D007525 ORTHO05D003398 2.4e-28 128.6 66 74.2
Prupe.2G175600 Prunus persica HOM05D007525 ORTHO05D003398 3.2e-28 128.3 66 77.3
Lj7A509T109 Lonicera japonica HOM05D007525 ORTHO05D003398 4.1e-28 127.9 66 74.2
Manes.05G030450 Manihot esculenta HOM05D007525 ORTHO05D003398 4.1e-28 127.9 64 75.0
Thecc.01G354100 Theobroma cacao HOM05D007525 ORTHO05D003398 7.1e-28 127.1 66 72.7
Cc00_g17820 Coffea canephora HOM05D007525 ORTHO05D003398 9.2e-28 126.7 66 72.7
RcHm_v2.0_Chr1g0357281 Rosa chinensis HOM05D007525 ORTHO05D003398 9.2e-28 126.7 66 77.3
Actinidia10060 Actinidia chinensis HOM05D007525 ORTHO05D003398 1.2e-27 126.3 66 71.2
Potri.002G162800 Populus trichocarpa HOM05D007525 ORTHO05D003398 1.2e-27 126.3 64 71.9
Sabra02G0147700 Salix brachista HOM05D007525 ORTHO05D003398 1.2e-27 126.3 64 71.9
Gohir.D07G146200 Gossypium hirsutum HOM05D007525 ORTHO05D003398 1.6e-27 125.9 66 72.7
Gorai.001G158400 Gossypium raimondii HOM05D007525 ORTHO05D003398 1.6e-27 125.9 66 72.7
Zm00001eb073280 Zea mays HOM05D007525 ORTHO05D003398 2.7e-27 125.2 66 71.2
Atru.chr5.548 Acer truncatum HOM05D007525 ORTHO05D003398 3.5e-27 124.8 66 71.2
Nitab4.5_0000915g0170 Nicotiana tabacum HOM05D007525 ORTHO05D003398 3.5e-27 124.8 87 57.5
Aqoxy7G00302 Aquilegia oxysepala HOM05D007525 ORTHO05D003398 4.6e-27 124.4 61 80.3
CSS0031135 Camellia sinensis var. sinensis HOM05D007525 ORTHO05D003398 4.6e-27 124.4 66 71.2
FvH4_7g15085 Fragaria vesca HOM05D007525 ORTHO05D003398 4.6e-27 124.4 66 75.8
MD01G1069500 Malus domestica HOM05D007525 ORTHO05D003398 4.6e-27 124.4 66 75.8
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.0e-27 124.0 66 75.8
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.0e-27 124.0 66 75.8
Psat4g157560 Pisum sativum HOM05D007525 ORTHO05D003398 6.0e-27 124.0 66 72.7
Ca_03496_v3 Cicer arietinum L. HOM05D007525 ORTHO05D003398 7.8e-27 123.6 62 77.4
Nitab4.5_0010703g0010 Nicotiana tabacum HOM05D007525 ORTHO05D003398 7.8e-27 123.6 87 57.5
AUR62004400 Chenopodium quinoa HOM05D007525 ORTHO05D003398 1.0e-26 123.2 65 73.8
VMungo0331G0679 Vigna mungo HOM05D007525 ORTHO05D003398 1.0e-26 123.2 66 74.2
EL10Ac1g00368 Beta vulgaris HOM05D007525 ORTHO05D003398 1.3e-26 122.9 65 75.4
Cpa.g.sc184.25 Carica papaya HOM05D007525 ORTHO05D003398 1.3e-26 122.9 66 71.2
AUR62022606 Chenopodium quinoa HOM05D007525 ORTHO05D003398 1.3e-26 122.9 60 80.0
vmacro13241 Vaccinium macrocarpon HOM05D007525 ORTHO05D003398 1.3e-26 122.9 63 73.0
Ah.05g180250 Amaranthus hybridus HOM05D007525 ORTHO05D003398 1.7e-26 122.5 60 80.0
CsaV3_6G000860 Cucumis sativus L. HOM05D007525 ORTHO05D003398 1.7e-26 122.5 67 74.6
TPR.G28291 Trifolium pratense HOM05D007525 ORTHO05D003398 1.7e-26 122.5 66 72.7
CANSAT56G0175 Cannabis sativa HOM05D007525 ORTHO05D003398 2.3e-26 122.1 60 76.7
Lj3g0004891 Lotus japonicus HOM05D007525 ORTHO05D003398 2.3e-26 122.1 66 72.7
Carub.0004s2880 Capsella rubella HOM05D007525 ORTHO05D003398 3.0e-26 121.7 63 73.0
Duzib133G0712 Durio zibethinus HOM05D007525 ORTHO05D003398 3.0e-26 121.7 62 74.2
Migut.N01460 Erythranthe guttata HOM05D007525 ORTHO05D003398 3.0e-26 121.7 81 60.5
Thhalv10001607m.g Eutrema salsugineum HOM05D007525 ORTHO05D003398 3.0e-26 121.7 63 73.0
Sp4g28160 Schrenkiella parvula HOM05D007525 ORTHO05D003398 3.0e-26 121.7 63 73.0
ATR0661G217 Amborella trichopoda HOM05D007525 ORTHO05D003398 3.9e-26 121.3 66 69.7
AT2G46100 Arabidopsis thaliana HOM05D007525 ORTHO05D003398 3.9e-26 121.3 63 71.4
MELO3C021185.2 Cucumis melo HOM05D007525 ORTHO05D003398 3.9e-26 121.3 67 73.1
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.9e-26 121.3 66 74.2
Lalb_Chr10g0096641 Lupinus albus HOM05D007525 ORTHO05D003398 3.9e-26 121.3 62 75.8
C04p06980 Brassica napus HOM05D005821 ORTHO05D006649 6.6e-26 120.6 63 71.4
ECA240G1228 Erigeron canadensis HOM05D007525 ORTHO05D003398 6.6e-26 120.6 67 70.1
MSTRG.4841 Avicennia marina HOM05D007525 ORTHO05D003398 8.6e-26 120.2 66 71.2
A05p06060 Brassica napus HOM05D007525 ORTHO05D003398 8.6e-26 120.2 63 69.8
Medtr8g028545 Medicago truncatula HOM05D007525 ORTHO05D003398 8.6e-26 120.2 62 75.8
AL4G45330 Arabidopsis lyrata HOM05D007525 ORTHO05D003398 1.5e-25 119.4 63 71.4
Peaxi162Scf00020g00126 Petunia axillaris HOM05D007525 ORTHO05D003398 1.5e-25 119.4 87 56.3
CAN.G78.117 Capsicum annuum HOM05D007525 ORTHO05D003398 1.9e-25 119.0 83 59.0
Solyc01g095000.3 Solanum lycopersicum HOM05D007525 ORTHO05D003398 1.9e-25 119.0 83 59.0
PGSC0003DMG400000187 Solanum tuberosum HOM05D007525 ORTHO05D003398 1.9e-25 119.0 83 59.0
Aa31LG1G27510 Aethionema arabicum HOM05D005821 ORTHO05D006649 2.5e-25 118.6 66 69.7
Gohir.A07G140800 Gossypium hirsutum HOM05D007525 ORTHO05D003398 2.5e-25 118.6 66 69.7
Sopen01g038780 Solanum pennellii HOM05D007525 ORTHO05D003398 2.5e-25 118.6 83 57.8
DCAR_025212 Daucus carota HOM05D001555 ORTHO05D001616 4.3e-25 117.9 66 66.7
BolC4t22319H Brassica oleracea HOM05D005821 ORTHO05D006649 5.6e-25 117.5 63 69.8
Ciclev10022006m.g Citrus clementina HOM05D007525 ORTHO05D003398 7.3e-25 117.1 60 73.3
Oeu036594.1 Olea europaea HOM05D007525 ORTHO05D003398 9.5e-25 116.7 60 73.3
SalBow5G0215 Salvia bowleyana HOM05D007525 ORTHO05D003398 9.5e-25 116.7 81 56.8
THA.LOC104817313 Tarenaya hassleriana HOM05D007525 ORTHO05D003398 2.1e-24 115.5 62 71.0
TWI59G1390 Tripterygium wilfordii HOM05D007525 ORTHO05D003398 2.8e-24 115.2 62 69.4
unitig_22.g6725 Utricularia gibba HOM05D007525 ORTHO05D003398 2.8e-24 115.2 83 55.4
HanXRQChr03g0093451 Helianthus annuus HOM05D007525 ORTHO05D003398 4.7e-24 114.4 61 72.1
ClCG06G003450 Citrullus lanatus HOM05D007525 ORTHO05D003398 1.1e-23 113.2 73 67.1
PSO478G5123 Papaver somniferum HOM05D007525 ORTHO05D003398 6.8e-23 110.5 58 70.7
SGA_v2.0_scaffold43G16396 Striga asiatica HOM05D007525 ORTHO05D003398 1.5e-22 109.4 78 55.1
Pp3c4_17920 Physcomitrium patens HOM05D007525 ORTHO05D003398 7.3e-17 90.5 63 57.1
CBR_g31994 Chara braunii HOM05D007525 ORTHO05D003398 3.6e-16 88.2 68 51.5
Haze_15550 Corylus avellana HOM05D007525 ORTHO05D003398 1.4e-15 86.3 68 57.4
SMO358G0422 Selaginella moellendorffii HOM05D007525 ORTHO05D003398 4.0e-15 84.7 54 59.3
Glyma.16G031100 Glycine max HOM05D007525 ORTHO05D003398 6.8e-15 84.0 40 80.0
Manes.17G000837 Manihot esculenta HOM05D007525 ORTHO05D003398 8.9e-15 83.6 62 54.8
Phvul.010G105000 Phaseolus vulgaris HOM05D007525 ORTHO05D003398 1.2e-14 83.2 43 74.4
Mapoly0153s0018 Marchantia polymorpha HOM05D007525 ORTHO05D003398 1.5e-14 82.8 61 52.5
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.4e-14 81.3 43 72.1
COL.COLO4_12762 Corchorus olitorius HOM05D007525 ORTHO05D003398 5.8e-14 80.9 43 72.1
Os04g0578200 Oryza sativa ssp. japonica HOM05D007525 ORTHO05D003398 5.8e-14 80.9 43 69.8
Rhsim07G0011500 Rhododendron simsii HOM05D001943 ORTHO05D001969 3.8e-13 78.2 38 73.7
MCO05G605 Micromonas commoda HOM05D007525 ORTHO05D003398 5.1e-10 67.8 54 48.1
MBI04_g26962_MAGBIO Magnolia biondii HOM05D007525 ORTHO05D003398 3.3e-09 65.1 43 60.5
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 1.8e-07 59.3 54 42.6
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 6.9e-07 57.4 56 44.6
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 9.0e-07 57.0 56 44.6
TPR.G34652 Trifolium pratense HOM05D007525 ORTHO05D003398 9.0e-07 57.0 36 58.3
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 1.2e-06 56.6 60 41.7
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 2.6e-06 55.5 56 42.9
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.6e-06 55.5 60 40.0
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.6e-06 55.5 60 40.0
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.6e-06 55.5 60 40.0
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 3.4e-06 55.1 56 42.9
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 3.4e-06 55.1 56 42.9
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 3.4e-06 55.1 56 42.9
TPR.G20765 Trifolium pratense HOM05D007525 ORTHO05D003398 3.4e-06 55.1 40 55.0
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 4.4e-06 54.7 56 44.6
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 4.4e-06 54.7 56 42.9
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 5.8e-06 54.3 56 42.9
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 5.8e-06 54.3 56 42.9
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 7.6e-06 53.9 54 44.4
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 9.9e-06 53.5 64 40.6
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 9.9e-06 53.5 56 44.6
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 9.9e-06 53.5 59 42.4


User provided reference genes

Program Settings