Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20664 Sequoiadendron giganteum HOM05D001953 ORTHO05D001904 1.7e-31 138.7 67 100.0
SEGI_39216 Sequoiadendron giganteum HOM05D001953 ORTHO05D001904 3.2e-14 81.3 69 65.2
FAN15G0258 Fragaria x ananassa HOM05D001953 ORTHO05D001904 2.5e-11 71.6 69 56.5
FAN24G0556 Fragaria x ananassa HOM05D001953 ORTHO05D001904 2.5e-11 71.6 69 56.5
RcHm_v2.0_Chr6g0256911 Rosa chinensis HOM05D001953 ORTHO05D001904 2.5e-11 71.6 69 56.5
FvH4_2g06270 Fragaria vesca HOM05D001953 ORTHO05D001904 3.3e-11 71.2 47 72.3
FAN27G3013 Fragaria x ananassa HOM05D001953 ORTHO05D001904 5.6e-11 70.5 69 55.1
Nitab4.5_0005938g0060 Nicotiana tabacum HOM05D001953 ORTHO05D001904 1.3e-10 69.3 54 64.8
Nitab4.5_0010991g0010 Nicotiana tabacum HOM05D001953 ORTHO05D001904 1.3e-10 69.3 54 64.8
Oeu053844.1 Olea europaea HOM05D001953 ORTHO05D001904 1.3e-10 69.3 54 64.8
Oeu053846.1 Olea europaea HOM05D001953 ORTHO05D001904 1.3e-10 69.3 54 64.8
Aqoxy2G04010 Aquilegia oxysepala HOM05D001953 ORTHO05D001904 1.6e-10 68.9 69 55.1
MSTRG.4280 Avicennia marina HOM05D001953 ORTHO05D001904 1.6e-10 68.9 54 64.8
TWI73G0110 Tripterygium wilfordii HOM05D001953 ORTHO05D001904 1.6e-10 68.9 69 53.6
CANSAT78G1716 Cannabis sativa HOM05D001953 ORTHO05D001904 2.1e-10 68.6 55 63.6
Prupe.8G007500 Prunus persica HOM05D001953 ORTHO05D001904 2.1e-10 68.6 70 57.1
Sc19g0007500 Simmondsia chinensis HOM05D001953 ORTHO05D001904 2.1e-10 68.6 47 70.2
PSO170G3615 Papaver somniferum HOM05D001953 ORTHO05D001904 2.8e-10 68.2 47 70.2
PSO357G0184 Papaver somniferum HOM05D001953 ORTHO05D001904 2.8e-10 68.2 47 70.2
Ciclev10005781m.g Citrus clementina HOM05D001953 ORTHO05D001904 3.7e-10 67.8 47 68.1
MBI07_g20599_MAGBIO Magnolia biondii HOM05D001953 ORTHO05D001904 3.7e-10 67.8 47 68.1
SalBow3G2148 Salvia bowleyana HOM05D001953 ORTHO05D001904 3.7e-10 67.8 47 66.0
SalBow3G2190 Salvia bowleyana HOM05D001953 ORTHO05D001904 3.7e-10 67.8 47 66.0
CSS0045086 Camellia sinensis var. sinensis HOM05D001953 ORTHO05D001904 4.8e-10 67.4 47 66.0
CARHR125760 Cardamine hirsuta HOM05D001953 ORTHO05D001904 4.8e-10 67.4 70 51.4
Lsat_1_v5_gn_6_58300 Lactuca sativa HOM05D001953 ORTHO05D001904 4.8e-10 67.4 47 66.0
SGA_v2.0_scaffold12G06136 Striga asiatica HOM05D001953 ORTHO05D001904 4.8e-10 67.4 54 63.0
BcaC05g24376 Brassica carinata HOM05D001953 ORTHO05D001904 6.2e-10 67.0 66 53.0
C05p03870 Brassica napus HOM05D001953 ORTHO05D001904 6.2e-10 67.0 66 53.0
BolC5t29164H Brassica oleracea HOM05D001953 ORTHO05D001904 6.2e-10 67.0 66 53.0
CSS0017214 Camellia sinensis var. sinensis HOM05D001953 ORTHO05D001904 6.2e-10 67.0 47 66.0
Cfa008680 Carpinus fangiana HOM05D001953 ORTHO05D001904 6.2e-10 67.0 69 52.2
Thhalv10009707m.g Eutrema salsugineum HOM05D001953 ORTHO05D001904 6.2e-10 67.0 66 53.0
Haze_17302 Corylus avellana HOM05D001953 ORTHO05D001904 8.2e-10 66.6 69 53.6
Peaxi162Scf00286g00052 Petunia axillaris HOM05D001953 ORTHO05D001904 8.2e-10 66.6 54 63.0
Atru.chr3.1822 Acer truncatum HOM05D001953 ORTHO05D001904 1.1e-09 66.2 47 68.1
BcaB06g28576 Brassica carinata HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
BcaC02g07955 Brassica carinata HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
A04p24650 Brassica napus HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
C04p61550 Brassica napus HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
BolC4t27638H Brassica oleracea HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
Thhalv10017523m.g Eutrema salsugineum HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
Sp4g14390 Schrenkiella parvula HOM05D001953 ORTHO05D001904 1.1e-09 66.2 70 50.0
unitig_899.g15432 Utricularia gibba HOM05D001259 ORTHO05D001103 1.1e-09 66.2 70 52.9
Cpa.g.sc58.135 Carica papaya HOM05D001953 ORTHO05D001904 1.4e-09 65.9 56 57.1
ATR1136G047 Amborella trichopoda HOM05D001953 ORTHO05D001904 1.8e-09 65.5 47 63.8
AL4G27350 Arabidopsis lyrata HOM05D001953 ORTHO05D001904 1.8e-09 65.5 70 51.4
A10p04250 Brassica napus HOM05D001953 ORTHO05D001904 1.8e-09 65.5 66 51.5
BraA10t42692Z Brassica rapa HOM05D001953 ORTHO05D001904 1.8e-09 65.5 66 51.5
DCAR_027474 Daucus carota HOM05D001953 ORTHO05D001904 1.8e-09 65.5 54 61.1
HanXRQChr02g0058361 Helianthus annuus HOM05D001953 ORTHO05D001904 1.8e-09 65.5 70 51.4
THA.LOC104826168 Tarenaya hassleriana HOM05D001953 ORTHO05D001904 1.8e-09 65.5 70 51.4
TAR362G0607 Trochodendron aralioides HOM05D001953 ORTHO05D001904 1.8e-09 65.5 47 68.1
Sp1g04380 Schrenkiella parvula HOM05D001953 ORTHO05D001904 2.4e-09 65.1 66 51.5
Oeu034470.1 Olea europaea HOM05D001953 ORTHO05D001904 3.1e-09 64.7 54 59.3
arahy.Tifrunner.gnm1.ann1.EJRX2U Arachis hypogaea HOM05D001953 ORTHO05D001904 4.0e-09 64.3 55 58.2
arahy.Tifrunner.gnm1.ann1.UVB7JS Arachis hypogaea HOM05D001953 ORTHO05D001904 4.0e-09 64.3 55 58.2
ECA233G3623 Erigeron canadensis HOM05D001953 ORTHO05D006109 4.0e-09 64.3 70 51.4
ECA233G3967 Erigeron canadensis HOM05D001953 ORTHO05D001904 4.0e-09 64.3 70 51.4
HanXRQChr11g0341501 Helianthus annuus HOM05D001953 ORTHO05D001904 4.0e-09 64.3 75 48.0
vmacro15597 Vaccinium macrocarpon HOM05D001953 ORTHO05D001904 4.0e-09 64.3 47 63.8
AT2G31985 Arabidopsis thaliana HOM05D001953 ORTHO05D001904 5.3e-09 63.9 70 50.0
CAN.G681.53 Capsicum annuum HOM05D001953 ORTHO05D001904 5.3e-09 63.9 54 61.1
Eucgr.F01644 Eucalyptus grandis HOM05D001953 ORTHO05D001904 5.3e-09 63.9 47 66.0
EL10Ac3g07415 Beta vulgaris HOM05D001953 ORTHO05D001904 6.9e-09 63.5 47 63.8
CiPaw.02G061700 Carya illinoinensis HOM05D001953 ORTHO05D001904 6.9e-09 63.5 69 49.3
ClCG09G009280 Citrullus lanatus HOM05D001953 ORTHO05D001904 6.9e-09 63.5 69 49.3
MELO3C024162.2 Cucumis melo HOM05D001953 ORTHO05D001904 6.9e-09 63.5 69 49.3
Gohir.A09G208700 Gossypium hirsutum HOM05D001953 ORTHO05D001904 6.9e-09 63.5 47 63.8
Gohir.D09G202200 Gossypium hirsutum HOM05D001953 ORTHO05D001904 6.9e-09 63.5 47 63.8
Gorai.006G226000 Gossypium raimondii HOM05D001953 ORTHO05D001904 6.9e-09 63.5 47 63.8
Hund24449 Selenicereus undatus HOM05D001953 ORTHO05D001904 6.9e-09 63.5 47 63.8
Solyc09g098120.3 Solanum lycopersicum HOM05D001953 ORTHO05D001904 6.9e-09 63.5 54 61.1
Sopen09g036070 Solanum pennellii HOM05D001953 ORTHO05D001904 6.9e-09 63.5 54 61.1
PGSC0003DMG400006578 Solanum tuberosum HOM05D001953 ORTHO05D001904 6.9e-09 63.5 54 61.1
AT1G05510 Arabidopsis thaliana HOM05D001953 ORTHO05D001904 9.0e-09 63.2 66 50.0
CsaV3_7G025670 Cucumis sativus L. HOM05D001953 ORTHO05D001904 9.0e-09 63.2 69 50.7
Migut.G00766 Erythranthe guttata HOM05D001953 ORTHO05D001904 9.0e-09 63.2 54 57.4
HanXRQChr03g0089251 Helianthus annuus HOM05D001953 ORTHO05D001904 9.0e-09 63.2 70 50.0
Carub.0001s0483 Capsella rubella HOM05D001953 ORTHO05D001904 1.2e-08 62.8 66 50.0
Carub.0004s1333 Capsella rubella HOM05D001953 ORTHO05D001904 1.2e-08 62.8 70 48.6
Cc03_g10230 Coffea canephora HOM05D001953 ORTHO05D001904 1.2e-08 62.8 47 61.7
MD05G1004300 Malus domestica HOM05D001953 ORTHO05D001904 1.2e-08 62.8 47 61.7
Gohir.D09G202100 Gossypium hirsutum HOM05D001953 ORTHO05D001904 1.5e-08 62.4 47 63.8
Gorai.006G225900 Gossypium raimondii HOM05D001953 ORTHO05D001904 1.5e-08 62.4 47 63.8
Aa31LG1G19140 Aethionema arabicum HOM05D001953 ORTHO05D001904 2.0e-08 62.0 66 50.0
Ah.13g077730 Amaranthus hybridus HOM05D001953 ORTHO05D001904 2.0e-08 62.0 47 61.7
Rhsim02G0070100 Rhododendron simsii HOM05D001953 ORTHO05D001904 2.0e-08 62.0 47 61.7
BcaB02g06843 Brassica carinata HOM05D001953 ORTHO05D001904 2.6e-08 61.6 66 50.0
HPP92_024170 Vanilla planifolia HOM05D001953 ORTHO05D001904 2.6e-08 61.6 70 52.9
AL1G15350 Arabidopsis lyrata HOM05D001953 ORTHO05D001904 3.4e-08 61.2 55 56.4
Gohir.A09G208600 Gossypium hirsutum HOM05D001953 ORTHO05D001904 3.4e-08 61.2 47 61.7
CARHR004990 Cardamine hirsuta HOM05D001953 ORTHO05D001904 4.5e-08 60.8 66 50.0
AUR62018510 Chenopodium quinoa HOM05D001953 ORTHO05D001904 4.5e-08 60.8 47 61.7
PGR042G1845 Punica granatum HOM05D001953 ORTHO05D001904 4.5e-08 60.8 47 61.7
COL.COLO4_08684 Corchorus olitorius HOM05D001953 ORTHO05D001904 5.8e-08 60.5 47 59.6
Lj6g0016825 Lotus japonicus HOM05D001953 ORTHO05D001904 5.8e-08 60.5 55 52.7
MD00G1215300 Malus domestica HOM05D001953 ORTHO05D001904 5.8e-08 60.5 47 59.6
MD10G1093500 Malus domestica HOM05D001953 ORTHO05D001904 5.8e-08 60.5 47 59.6
Manes.05G194000 Manihot esculenta HOM05D001953 ORTHO05D001904 5.8e-08 60.5 47 63.8
Prupe.8G123000 Prunus persica HOM05D001953 ORTHO05D001904 5.8e-08 60.5 54 57.4
Lalb_Chr11g0075831 Lupinus albus HOM05D001953 ORTHO05D001904 7.6e-08 60.1 69 49.3
HanXRQChr10g0282801 Helianthus annuus HOM05D000032 ORTHO05D001837 1.3e-07 59.3 70 47.1
VMungo1383G1637 Vigna mungo HOM05D001953 ORTHO05D001904 1.3e-07 59.3 70 48.6
BraA04t17983Z Brassica rapa HOM05D001953 ORTHO05D001904 1.7e-07 58.9 63 49.2
TPR.G18099 Trifolium pratense HOM05D001953 ORTHO05D001904 1.7e-07 58.9 70 47.1
CDE06G2642 Ceratophyllum demersum HOM05D001953 ORTHO05D001904 2.2e-07 58.5 47 61.7
Phvul.001G263900 Phaseolus vulgaris HOM05D001953 ORTHO05D001904 2.9e-07 58.2 70 48.6
Psat5g098680 Pisum sativum HOM05D001953 ORTHO05D001904 3.8e-07 57.8 70 47.1
Zm00001eb187280 Zea mays HOM05D001953 ORTHO05D001904 3.8e-07 57.8 47 57.4
Os05g0569500 Oryza sativa ssp. japonica HOM05D001953 ORTHO05D001904 8.4e-07 56.6 47 55.3
Pp3c9_2110 Physcomitrium patens HOM05D001953 ORTHO05D001904 8.4e-07 56.6 69 44.9
Medtr3g084870 Medicago truncatula HOM05D001953 ORTHO05D001904 1.1e-06 56.2 70 44.3
GSVIVG01031627001 Vitis vinifera HOM05D001953 ORTHO05D001904 1.4e-06 55.8 47 57.4
Ca_16439_v3 Cicer arietinum L. HOM05D001953 ORTHO05D001904 4.2e-06 54.3 55 47.3
Glyma.11G252800 Glycine max HOM05D001953 ORTHO05D001904 9.3e-06 53.1 70 45.7
SMO238G0013 Selaginella moellendorffii HOM05D001953 ORTHO05D001904 9.3e-06 53.1 69 44.9


User provided reference genes

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