Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.1e-89 333.2 163 100.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 3.3e-12 75.9 153 35.3
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.1e-11 73.2 46 73.9
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 4.7e-11 72.0 57 61.4
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 8.0e-11 71.2 57 63.2
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 8.0e-11 71.2 57 61.4
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 8.0e-11 71.2 57 59.6
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 1.1e-10 70.9 57 59.6
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.1e-10 70.9 57 63.2
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.4e-10 70.5 57 59.6
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.4e-10 70.5 149 32.2
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.4e-10 70.5 57 57.9
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 1.4e-10 70.5 57 61.4
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.8e-10 70.1 146 33.6
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.8e-10 70.1 135 36.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 2.3e-10 69.7 46 69.6
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 2.3e-10 69.7 57 57.9
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 2.3e-10 69.7 146 33.6
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.3e-10 69.7 146 33.6
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 2.3e-10 69.7 57 63.2
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.3e-10 69.7 57 61.4
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.1e-10 69.3 57 57.9
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.1e-10 69.3 121 38.8
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 3.1e-10 69.3 57 59.6
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 3.1e-10 69.3 57 61.4
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 4.0e-10 68.9 57 57.9
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 5.2e-10 68.6 41 78.0
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 5.2e-10 68.6 41 78.0
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 5.2e-10 68.6 46 69.6
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 5.2e-10 68.6 57 59.6
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 5.2e-10 68.6 57 59.6
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 6.8e-10 68.2 57 57.9
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 8.9e-10 67.8 57 57.9
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 8.9e-10 67.8 57 57.9
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 8.9e-10 67.8 57 57.9
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 1.2e-09 67.4 41 73.2
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.2e-09 67.4 41 73.2
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 1.2e-09 67.4 41 75.6
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.2e-09 67.4 57 56.1
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.5e-09 67.0 41 75.6
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.5e-09 67.0 57 56.1
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.5e-09 67.0 46 65.2
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.5e-09 67.0 41 75.6
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.5e-09 67.0 41 78.0
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.0e-09 66.6 41 73.2
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.0e-09 66.6 46 65.2
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.0e-09 66.6 57 56.1
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.6e-09 66.2 57 56.1
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 2.6e-09 66.2 57 56.1
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 2.6e-09 66.2 57 56.1
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 2.6e-09 66.2 57 56.1
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 2.6e-09 66.2 57 56.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 2.6e-09 66.2 63 54.0
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 2.6e-09 66.2 41 73.2
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.4e-09 65.9 57 54.4
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.4e-09 65.9 57 54.4
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 3.4e-09 65.9 57 54.4
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 4.4e-09 65.5 39 74.4
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 4.4e-09 65.5 57 56.1
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 4.4e-09 65.5 41 70.7
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 5.8e-09 65.1 39 74.4
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.8e-09 65.1 50 66.0
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 5.8e-09 65.1 57 57.9
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 5.8e-09 65.1 41 73.2
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 5.8e-09 65.1 41 70.7
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 5.8e-09 65.1 41 73.2
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 7.5e-09 64.7 57 54.4
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 7.5e-09 64.7 57 54.4
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.3e-08 63.9 41 70.7
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 1.3e-08 63.9 62 53.2
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 1.7e-08 63.5 57 54.4
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.7e-08 63.5 41 70.7
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.7e-08 63.5 41 70.7
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.7e-08 63.5 39 74.4
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.7e-08 63.5 41 68.3
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 2.2e-08 63.2 41 70.7
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.2e-08 63.2 57 52.6
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.2e-08 63.2 41 70.7
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.9e-08 62.8 55 52.7
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 3.7e-08 62.4 57 50.9
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 3.7e-08 62.4 41 70.7
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 3.7e-08 62.4 39 71.8
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 4.9e-08 62.0 41 70.7
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.4e-07 60.5 47 57.4
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 2.4e-07 59.7 41 65.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 4.1e-07 58.9 57 49.1
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 5.4e-07 58.5 41 68.3


User provided reference genes

Program Settings