Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20630 Sequoiadendron giganteum HOM05D001277 ORTHO05D000950 9.5e-116 420.2 219 100.0
SEGI_32777 Sequoiadendron giganteum HOM05D001263 ORTHO05D000950 1.7e-72 276.6 187 77.0
SEGI_29341 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 2.0e-49 199.9 143 74.1
SEGI_11821 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 3.8e-40 169.1 117 70.1
SEGI_07629 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 2.3e-21 106.7 171 36.8
SEGI_13782 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 2.2e-19 100.1 150 38.7
SEGI_34052 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 1.5e-15 87.4 137 36.5
SEGI_34437 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 1.9e-15 87.0 156 33.3
SEGI_14300 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 2.8e-14 83.2 123 35.8
SEGI_34801 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 3.6e-14 82.8 144 31.2
SEGI_01180 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 8.0e-14 81.6 142 37.3
SEGI_27151 Sequoiadendron giganteum HOM05D001263 ORTHO05D000950 3.4e-12 76.3 116 39.7
SEGI_32203 Sequoiadendron giganteum HOM05D001263 ORTHO05D000950 3.4e-12 76.3 119 36.1
SEGI_41365 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 5.7e-12 75.5 148 33.1
SEGI_25056 Sequoiadendron giganteum HOM05D001263 ORTHO05D001120 1.3e-11 74.3 138 33.3
CSS0018561 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 8.3e-11 71.6 134 33.6
Duzib068G1427 Durio zibethinus HOM05D001277 ORTHO05D000950 9.2e-10 68.2 147 33.3
SEGI_25562 Sequoiadendron giganteum HOM05D001263 ORTHO05D000950 1.6e-09 67.4 127 38.6
SEGI_10316 Sequoiadendron giganteum HOM05D001263 ORTHO05D000950 2.0e-09 67.0 118 33.9
Dinv20667 Davidia involucrata HOM05D001277 ORTHO05D000950 4.5e-09 65.9 140 34.3
Lj4g0004622 Lotus japonicus HOM05D001277 ORTHO05D000950 5.9e-09 65.5 114 35.1
Phvul.003G199500 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 5.9e-09 65.5 150 32.7
HanXRQChr02g0058551 Helianthus annuus HOM05D001263 ORTHO05D001120 1.0e-08 64.7 127 31.5
VMungo1215G1091 Vigna mungo HOM05D001277 ORTHO05D000950 1.0e-08 64.7 137 32.1
Glyma.05G036800 Glycine max HOM05D001277 ORTHO05D000950 3.8e-08 62.8 116 36.2
Manes.16G028800 Manihot esculenta HOM05D001277 ORTHO05D000950 3.8e-08 62.8 118 32.2
GSVIVG01007772001 Vitis vinifera HOM05D001277 ORTHO05D000950 3.8e-08 62.8 116 34.5
EL10Ac5g10767 Beta vulgaris HOM05D001277 ORTHO05D000950 5.0e-08 62.4 118 35.6
Manes.06G103800 Manihot esculenta HOM05D001277 ORTHO05D000950 5.0e-08 62.4 135 32.6
EL10Ac5g10766 Beta vulgaris HOM05D001277 ORTHO05D000950 8.6e-08 61.6 125 31.2
Manes.14G067000 Manihot esculenta HOM05D001277 ORTHO05D000950 8.6e-08 61.6 134 31.3
Gohir.A03G096500 Gossypium hirsutum HOM05D001277 ORTHO05D000950 1.1e-07 61.2 136 31.6
Gohir.D02G117600 Gossypium hirsutum HOM05D001277 ORTHO05D000950 1.5e-07 60.8 136 31.6
Gorai.005G136000 Gossypium raimondii HOM05D001277 ORTHO05D000950 1.5e-07 60.8 136 31.6
Hma1.2p1_2175F.1_g316090 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 1.5e-07 60.8 115 32.2
MD05G1338200 Malus domestica HOM05D001277 ORTHO05D000950 1.5e-07 60.8 126 33.3
Sed0024653 Sechium edule HOM05D001277 ORTHO05D000950 1.5e-07 60.8 118 32.2
EL10Ac8g20391 Beta vulgaris HOM05D001277 ORTHO05D000950 1.9e-07 60.5 140 27.1
AUR62030981 Chenopodium quinoa HOM05D001277 ORTHO05D000950 1.9e-07 60.5 127 33.1
AUR62008225 Chenopodium quinoa HOM05D001277 ORTHO05D000950 2.5e-07 60.1 122 34.4
ClCG07G002820 Citrullus lanatus HOM05D001277 ORTHO05D000950 2.5e-07 60.1 117 34.2
Cc04_g13690 Coffea canephora HOM05D001277 ORTHO05D000950 2.5e-07 60.1 117 34.2
Duzib205G0114 Durio zibethinus HOM05D001277 ORTHO05D000950 2.5e-07 60.1 114 35.1
Glyma.17G090500 Glycine max HOM05D001277 ORTHO05D000950 2.5e-07 60.1 108 38.9
Oeu064782.1 Olea europaea HOM05D001277 ORTHO05D000950 2.5e-07 60.1 132 29.5
Ah.14g089470 Amaranthus hybridus HOM05D001277 ORTHO05D000950 3.3e-07 59.7 129 29.5
QL10p011975 Quercus lobata HOM05D001277 ORTHO05D000950 3.3e-07 59.7 134 31.3
Aqoxy5G03946 Aquilegia oxysepala HOM05D001263 ORTHO05D001120 4.3e-07 59.3 119 32.8
CSS0009069 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 4.3e-07 59.3 118 33.1
Cpa.g.sc124.41 Carica papaya HOM05D001277 ORTHO05D000950 4.3e-07 59.3 116 35.3
FvH4_3g09050 Fragaria vesca HOM05D001277 ORTHO05D000950 4.3e-07 59.3 118 32.2
Hma1.2p1_0176F.1_g077590 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 4.3e-07 59.3 114 33.3
Hma1.2p1_0176F.1_g077610 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 4.3e-07 59.3 112 33.9
MBI10_g11074_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 4.3e-07 59.3 115 33.0
Potri.019G099300 Populus trichocarpa HOM05D001277 ORTHO05D000950 4.3e-07 59.3 141 32.6
Potri.019G099500 Populus trichocarpa HOM05D001277 ORTHO05D000950 4.3e-07 59.3 141 32.6
EL10Ac8g20390 Beta vulgaris HOM05D001277 ORTHO05D000950 5.6e-07 58.9 131 31.3
CSS0006604 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 5.6e-07 58.9 114 28.9
FvH4_7g28610 Fragaria vesca HOM05D001263 ORTHO05D001120 5.6e-07 58.9 147 31.3
Actinidia13536 Actinidia chinensis HOM05D001263 ORTHO05D001120 7.3e-07 58.5 132 32.6
CiPaw.09G060700 Carya illinoinensis HOM05D001277 ORTHO05D000950 7.3e-07 58.5 128 30.5
COL.COLO4_07560 Corchorus olitorius HOM05D001277 ORTHO05D000950 7.3e-07 58.5 119 32.8
Glyma.04G182600 Glycine max HOM05D001277 ORTHO05D000950 7.3e-07 58.5 145 30.3
HanXRQChr14g0461851 Helianthus annuus HOM05D001263 ORTHO05D001120 7.3e-07 58.5 138 29.0
Phvul.009G179600 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 7.3e-07 58.5 130 30.8
Atru.chr9.2450 Acer truncatum HOM05D001277 ORTHO05D000950 9.5e-07 58.2 140 30.7
Aqoxy3G01012 Aquilegia oxysepala HOM05D001277 ORTHO05D000950 9.5e-07 58.2 116 31.9
EL10Ac5g10769 Beta vulgaris HOM05D001277 ORTHO05D000950 9.5e-07 58.2 132 35.6
Thhalv10014694m.g Eutrema salsugineum HOM05D001263 ORTHO05D001120 9.5e-07 58.2 124 30.6
PGR083G0118 Punica granatum HOM05D001277 ORTHO05D000950 9.5e-07 58.2 115 31.3
SalBow2G2930 Salvia bowleyana HOM05D002514 ORTHO05D002761 9.5e-07 58.2 114 38.6
Thecc.03G010300 Theobroma cacao HOM05D001277 ORTHO05D000950 9.5e-07 58.2 116 33.6
Dinv15296 Davidia involucrata HOM05D001277 ORTHO05D000950 2.1e-06 57.0 137 31.4
Lalb_Chr15g0089791 Lupinus albus HOM05D001277 ORTHO05D000950 2.1e-06 57.0 129 26.4
MD14G1182700 Malus domestica HOM05D001277 ORTHO05D000950 2.1e-06 57.0 128 31.2
Rhsim12G0163800 Rhododendron simsii HOM05D001277 ORTHO05D000950 2.1e-06 57.0 141 31.2
THA.LOC104811500 Tarenaya hassleriana HOM05D001263 ORTHO05D001120 2.1e-06 57.0 122 31.1
vmacro16602 Vaccinium macrocarpon HOM05D001277 ORTHO05D000950 2.1e-06 57.0 122 32.8
arahy.Tifrunner.gnm1.ann1.YFEV2R Arachis hypogaea HOM05D001277 ORTHO05D000950 2.8e-06 56.6 115 31.3
AUR62014829 Chenopodium quinoa HOM05D001277 ORTHO05D000950 2.8e-06 56.6 129 26.4
Cc04_g13700 Coffea canephora HOM05D001277 ORTHO05D000950 2.8e-06 56.6 113 31.0
Haze_07498 Corylus avellana HOM05D001277 ORTHO05D000950 2.8e-06 56.6 112 35.7
FAN04G0760 Fragaria x ananassa HOM05D001277 ORTHO05D000950 2.8e-06 56.6 133 32.3
Manes.12G088914 Manihot esculenta HOM05D001277 ORTHO05D000950 2.8e-06 56.6 183 26.8
Dinv17320 Davidia involucrata HOM05D001277 ORTHO05D000950 3.6e-06 56.2 115 28.7
Dinv40569 Davidia involucrata HOM05D001277 ORTHO05D000950 3.6e-06 56.2 115 30.4
FvH4_5g05180 Fragaria vesca HOM05D001277 ORTHO05D000950 3.6e-06 56.2 138 30.4
FAN18G1626 Fragaria x ananassa HOM05D001277 ORTHO05D000950 3.6e-06 56.2 138 30.4
Lj2g0026159 Lotus japonicus HOM05D001263 ORTHO05D001120 3.6e-06 56.2 121 32.2
Sabra19G0110300 Salix brachista HOM05D001277 ORTHO05D000950 3.6e-06 56.2 172 28.5
Solyc03g114230.2 Solanum lycopersicum HOM05D001277 ORTHO05D000950 3.6e-06 56.2 114 30.7
TAR629G0294 Trochodendron aralioides HOM05D001277 ORTHO05D000950 3.6e-06 56.2 136 30.1
Actinidia33058 Actinidia chinensis HOM05D001277 ORTHO05D000950 4.7e-06 55.8 116 31.9
arahy.Tifrunner.gnm1.ann1.MB81X2 Arachis hypogaea HOM05D001277 ORTHO05D000950 4.7e-06 55.8 115 30.4
EL10Ac5g10768 Beta vulgaris HOM05D001277 ORTHO05D000950 4.7e-06 55.8 118 33.9
Cfa019101 Carpinus fangiana HOM05D001277 ORTHO05D000950 4.7e-06 55.8 112 35.7
Cfa019102 Carpinus fangiana HOM05D001277 ORTHO05D000950 4.7e-06 55.8 113 32.7
Haze_07499 Corylus avellana HOM05D001277 ORTHO05D000950 4.7e-06 55.8 113 30.1
Duzib068G1182 Durio zibethinus HOM05D001263 ORTHO05D001120 4.7e-06 55.8 136 27.9
FAN13G2787 Fragaria x ananassa HOM05D001277 ORTHO05D000950 4.7e-06 55.8 133 33.1
MBI16_g26458_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 4.7e-06 55.8 118 32.2
TWI59G0794 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 4.7e-06 55.8 162 23.5
Ciclev10016466m.g Citrus clementina HOM05D001277 ORTHO05D000950 6.1e-06 55.5 130 28.5
Ciclev10022480m.g Citrus clementina HOM05D001277 ORTHO05D000950 6.1e-06 55.5 132 31.8
Migut.F00404 Erythranthe guttata HOM05D001263 ORTHO05D001120 6.1e-06 55.5 123 28.5
Glyma.16G201400 Glycine max HOM05D001263 ORTHO05D001120 6.1e-06 55.5 145 29.0
Potri.015G074500 Populus trichocarpa HOM05D001277 ORTHO05D000950 6.1e-06 55.5 115 33.0
Potri.019G099400 Populus trichocarpa HOM05D001277 ORTHO05D000950 6.1e-06 55.5 141 32.6
RcHm_v2.0_Chr7g0193761 Rosa chinensis HOM05D001277 ORTHO05D000950 6.1e-06 55.5 130 30.8
Sabra11G0037200 Salix brachista HOM05D001277 ORTHO05D000950 6.1e-06 55.5 122 27.0
Sabra12G0056700 Salix brachista HOM05D001277 ORTHO05D000950 6.1e-06 55.5 115 35.7
PGSC0003DMG400024597 Solanum tuberosum HOM05D001277 ORTHO05D000950 6.1e-06 55.5 114 30.7
VMungo1309G3071 Vigna mungo HOM05D001277 ORTHO05D000950 6.1e-06 55.5 130 30.0
CiPaw.12G025400 Carya illinoinensis HOM05D001277 ORTHO05D000950 8.0e-06 55.1 116 31.9
MELO3C018728.2 Cucumis melo HOM05D001277 ORTHO05D000950 8.0e-06 55.1 115 30.4
Manes.12G088952 Manihot esculenta HOM05D001277 ORTHO05D000950 8.0e-06 55.1 160 26.9
Potri.012G079100 Populus trichocarpa HOM05D001277 ORTHO05D000950 8.0e-06 55.1 134 32.1
Sabra13G0107700 Salix brachista HOM05D001277 ORTHO05D000950 8.0e-06 55.1 116 31.0
Sopen03g033330 Solanum pennellii HOM05D001277 ORTHO05D000950 8.0e-06 55.1 114 29.8
Thecc.03G165800 Theobroma cacao HOM05D001263 ORTHO05D001120 8.0e-06 55.1 124 31.5
VMungo0464G1288 Vigna mungo HOM05D001263 ORTHO05D001120 8.0e-06 55.1 144 32.6


User provided reference genes

Program Settings