Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20605 Sequoiadendron giganteum HOM05D002510 ORTHO05D007210 1.8e-98 362.5 172 100.0
Sp7g14310 Schrenkiella parvula HOM05D002510 ORTHO05D007210 1.1e-26 124.0 94 57.4
GSVIVG01016269001 Vitis vinifera HOM05D002510 ORTHO05D007210 2.5e-26 122.9 89 59.6
CSS0007795 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D007210 3.2e-26 122.5 95 60.0
AT5G20660 Arabidopsis thaliana HOM05D002510 ORTHO05D007210 5.5e-26 121.7 94 57.4
CARHR290280 Cardamine hirsuta HOM05D002510 ORTHO05D007210 9.3e-26 120.9 94 57.4
Lj1C913G7 Lonicera japonica HOM05D002510 ORTHO05D007210 1.2e-25 120.6 83 63.9
Carub.0006s1900 Capsella rubella HOM05D002510 ORTHO05D007210 1.6e-25 120.2 94 57.4
Thhalv10024352m.g Eutrema salsugineum HOM05D002510 ORTHO05D007210 2.1e-25 119.8 94 57.4
BolC1t02655H Brassica oleracea HOM05D002510 ORTHO05D007210 2.7e-25 119.4 94 57.4
Manes.10G046400 Manihot esculenta HOM05D002510 ORTHO05D007210 2.7e-25 119.4 83 63.9
A01p21720 Brassica napus HOM05D002510 ORTHO05D007210 3.6e-25 119.0 94 57.4
C01p27080 Brassica napus HOM05D002510 ORTHO05D007210 3.6e-25 119.0 94 57.4
BraA01t02081Z Brassica rapa HOM05D002510 ORTHO05D007210 3.6e-25 119.0 94 57.4
Haze_16889 Corylus avellana HOM05D002510 ORTHO05D007210 3.6e-25 119.0 95 61.1
Sopen04g011710 Solanum pennellii HOM05D002510 ORTHO05D007210 3.6e-25 119.0 89 59.6
ATR0048G055 Amborella trichopoda HOM05D002510 ORTHO05D007210 4.6e-25 118.6 83 67.5
Solyc04g025260.3 Solanum lycopersicum HOM05D002510 ORTHO05D007210 4.6e-25 118.6 89 58.4
TWI15G1196 Tripterygium wilfordii HOM05D002510 ORTHO05D007210 7.9e-25 117.9 89 60.7
AL6G32210 Arabidopsis lyrata HOM05D002510 ORTHO05D007210 1.0e-24 117.5 94 56.4
Cc02_g11330 Coffea canephora HOM05D002510 ORTHO05D007210 1.3e-24 117.1 89 60.7
Nitab4.5_0000534g0010 Nicotiana tabacum HOM05D002510 ORTHO05D007210 1.3e-24 117.1 89 58.4
BcaNung00246 Brassica carinata HOM05D002510 ORTHO05D007210 1.8e-24 116.7 94 57.4
Cpa.g.sc53.84 Carica papaya HOM05D002510 ORTHO05D007210 1.8e-24 116.7 89 57.3
Ciclev10030651m.g Citrus clementina HOM05D002510 ORTHO05D007210 1.8e-24 116.7 89 58.4
FAN06G2145 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.3e-24 116.3 83 63.9
PGR142G3054 Punica granatum HOM05D002510 ORTHO05D007210 2.3e-24 116.3 89 59.6
MD07G1174500 Malus domestica HOM05D002510 ORTHO05D007210 3.9e-24 115.5 83 62.7
RcHm_v2.0_Chr1g0363331 Rosa chinensis HOM05D002510 ORTHO05D007210 3.9e-24 115.5 83 63.9
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 8.7e-24 114.4 83 62.7
Nn2g10809 Nelumbo nucifera HOM05D002510 ORTHO05D007210 8.7e-24 114.4 83 61.4
Eucgr.G02835 Eucalyptus grandis HOM05D002510 ORTHO05D007210 1.1e-23 114.0 89 55.1
Dinv36438 Davidia involucrata HOM05D002510 ORTHO05D007210 1.5e-23 113.6 83 59.0
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.5e-23 113.6 83 61.4
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.5e-23 113.6 83 61.4
Peaxi162Scf01719g00012 Petunia axillaris HOM05D002510 ORTHO05D007210 1.5e-23 113.6 89 56.2
Hund12052 Selenicereus undatus HOM05D002510 ORTHO05D007210 1.5e-23 113.6 89 56.2
Cfa001648 Carpinus fangiana HOM05D002510 ORTHO05D007210 2.5e-23 112.8 95 57.9
arahy.Tifrunner.gnm1.ann1.T8Z27G Arachis hypogaea HOM05D002510 ORTHO05D007210 3.3e-23 112.5 89 58.4
arahy.Tifrunner.gnm1.ann1.UF4UZA Arachis hypogaea HOM05D002510 ORTHO05D007210 3.3e-23 112.5 89 58.4
CAN.G656.24 Capsicum annuum HOM05D002510 ORTHO05D007210 3.3e-23 112.5 94 54.3
CDE02G1489 Ceratophyllum demersum HOM05D002510 ORTHO05D007210 3.3e-23 112.5 101 57.4
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 3.3e-23 112.5 89 57.3
CiPaw.01G272500 Carya illinoinensis HOM05D002510 ORTHO05D007210 4.3e-23 112.1 83 60.2
Oeu014387.1 Olea europaea HOM05D002510 ORTHO05D007210 4.3e-23 112.1 94 53.2
Atru.chr12.757 Acer truncatum HOM05D002510 ORTHO05D007210 5.7e-23 111.7 83 60.2
Atru.chr12.781 Acer truncatum HOM05D002510 ORTHO05D007210 5.7e-23 111.7 83 60.2
FAN03G2366 Fragaria x ananassa HOM05D002510 ORTHO05D007210 5.7e-23 111.7 95 56.8
Lalb_Chr21g0306101 Lupinus albus HOM05D002510 ORTHO05D007210 5.7e-23 111.7 94 56.4
Aqoxy2G01930 Aquilegia oxysepala HOM05D002510 ORTHO05D007210 7.4e-23 111.3 95 56.8
ClCG05G021040 Citrullus lanatus HOM05D002510 ORTHO05D007210 7.4e-23 111.3 83 59.0
Hma1.2p1_0039F.1_g024760 Hydrangea macrophylla HOM05D002510 ORTHO05D007210 7.4e-23 111.3 83 60.2
Lj5g0022157 Lotus japonicus HOM05D002510 ORTHO05D007210 7.4e-23 111.3 101 54.5
Rhsim09G0151500 Rhododendron simsii HOM05D002510 ORTHO05D007210 7.4e-23 111.3 83 60.2
AUR62033005 Chenopodium quinoa HOM05D002510 ORTHO05D007210 9.7e-23 110.9 89 55.1
THA.LOC104827301 Tarenaya hassleriana HOM05D002510 ORTHO05D007210 9.7e-23 110.9 94 53.2
CsaV3_5G036260 Cucumis sativus L. HOM05D002510 ORTHO05D007210 1.3e-22 110.5 95 55.8
Nitab4.5_0001053g0050 Nicotiana tabacum HOM05D002510 ORTHO05D007210 1.3e-22 110.5 82 61.0
AUR62037115 Chenopodium quinoa HOM05D002510 ORTHO05D007210 1.7e-22 110.2 82 57.3
PSO339G3140 Papaver somniferum HOM05D002510 ORTHO05D007210 2.2e-22 109.8 84 61.9
PSO384G1458 Papaver somniferum HOM05D002510 ORTHO05D007210 2.2e-22 109.8 84 61.9
Thecc.10G074100 Theobroma cacao HOM05D002510 ORTHO05D007210 2.2e-22 109.8 83 60.2
Aa31LG1G20400 Aethionema arabicum HOM05D002510 ORTHO05D007210 2.8e-22 109.4 94 58.5
AUR62038657 Chenopodium quinoa HOM05D002510 ORTHO05D007210 2.8e-22 109.4 83 57.8
Migut.F01756 Erythranthe guttata HOM05D002510 ORTHO05D007210 2.8e-22 109.4 89 56.2
Psat6g183520 Pisum sativum HOM05D002510 ORTHO05D007210 2.8e-22 109.4 89 56.2
SalBow3G0762 Salvia bowleyana HOM05D002510 ORTHO05D007210 2.8e-22 109.4 89 57.3
TAR633G1832 Trochodendron aralioides HOM05D002510 ORTHO05D007210 2.8e-22 109.4 95 53.7
HPP92_008761 Vanilla planifolia HOM05D002510 ORTHO05D007210 2.8e-22 109.4 83 57.8
SGA_v2.0_scaffold51G18685 Striga asiatica HOM05D002510 ORTHO05D007210 3.7e-22 109.0 94 52.1
MELO3C012427.2 Cucumis melo HOM05D002510 ORTHO05D007210 4.8e-22 108.6 101 51.5
ECA233G4317 Erigeron canadensis HOM05D002510 ORTHO05D007210 4.8e-22 108.6 89 56.2
EL10Ac3g06545 Beta vulgaris HOM05D002510 ORTHO05D007210 8.2e-22 107.8 83 56.6
Ciclev10030885m.g Citrus clementina HOM05D002510 ORTHO05D007210 8.2e-22 107.8 89 52.8
TPR.G1937 Trifolium pratense HOM05D002510 ORTHO05D007210 8.2e-22 107.8 89 55.1
Glyma.10G210900 Glycine max HOM05D002510 ORTHO05D007210 1.1e-21 107.5 83 59.0
Phvul.007G094700 Phaseolus vulgaris HOM05D002510 ORTHO05D007210 1.1e-21 107.5 83 60.2
VMungo0720G2840 Vigna mungo HOM05D002510 ORTHO05D007210 1.1e-21 107.5 89 57.3
Zm00001eb378830 Zea mays HOM05D002510 ORTHO05D007210 1.1e-21 107.5 88 52.3
HanXRQChr08g0218901 Helianthus annuus HOM05D002510 ORTHO05D007210 1.4e-21 107.1 83 59.0
Medtr1g095040 Medicago truncatula HOM05D002510 ORTHO05D007210 1.8e-21 106.7 89 55.1
Gohir.A13G021900 Gossypium hirsutum HOM05D002510 ORTHO05D007210 5.3e-21 105.1 101 50.5
Gohir.D13G022500 Gossypium hirsutum HOM05D002510 ORTHO05D007210 5.3e-21 105.1 101 50.5
Gorai.013G025200 Gossypium raimondii HOM05D002510 ORTHO05D007210 5.3e-21 105.1 101 50.5
vmacro04870 Vaccinium macrocarpon HOM05D002510 ORTHO05D007210 5.3e-21 105.1 83 55.4
Ah.08g213550 Amaranthus hybridus HOM05D002510 ORTHO05D007210 6.9e-21 104.8 89 50.6
Sed0025740 Sechium edule HOM05D002510 ORTHO05D007210 1.2e-20 104.0 95 53.7
Duzib128G0012 Durio zibethinus HOM05D002510 ORTHO05D007210 1.5e-20 103.6 78 57.7
Lsat_1_v5_gn_8_20140 Lactuca sativa HOM05D002510 ORTHO05D007210 1.5e-20 103.6 80 57.5
Sc09g0006280 Simmondsia chinensis HOM05D002510 ORTHO05D007210 1.5e-20 103.6 83 54.2
MSTRG.8144 Avicennia marina HOM05D002510 ORTHO05D007210 3.4e-20 102.4 101 49.5
QL08p055755 Quercus lobata HOM05D002510 ORTHO05D007210 4.5e-20 102.1 95 52.6
Potri.008G039400 Populus trichocarpa HOM05D002510 ORTHO05D007210 5.9e-20 101.7 84 57.1
SGA_v2.0_scaffold341G49348 Striga asiatica HOM05D002510 ORTHO05D007210 3.8e-19 99.0 89 49.4
Pp3c15_14500 Physcomitrium patens HOM05D002510 ORTHO05D007210 5.0e-19 98.6 101 49.5
SMO364G0963 Selaginella moellendorffii HOM05D002510 ORTHO05D007210 4.2e-18 95.5 88 45.5
SEGI_24155 Sequoiadendron giganteum HOM05D000003 ORTHO05D383974 6.7e-16 88.2 52 75.0
Pp3c9_12500 Physcomitrium patens HOM05D002510 ORTHO05D007210 1.7e-14 83.6 89 44.9
Manes.10G046500 Manihot esculenta HOM05D002510 ORTHO05D007210 4.8e-14 82.0 92 45.7
Prupe.2G213300 Prunus persica HOM05D002510 ORTHO05D007210 9.1e-13 77.8 50 70.0
SHI21362 Sapria himalayana HOM05D002510 ORTHO05D007210 7.7e-12 74.7 65 50.8
Os04g0519925 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D007210 1.0e-11 74.3 58 50.0
FvH4_7g19460 Fragaria vesca HOM05D002510 ORTHO05D007210 1.3e-11 73.9 47 70.2
AagrBONN_evm.TU.Sc2ySwM_344.3754 Anthoceros agrestis HOM05D002510 ORTHO05D007210 2.9e-11 72.8 89 44.9
SEGI_03842 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 5.5e-10 68.6 31 87.1
SEGI_17225 Sequoiadendron giganteum HOM05D000394 ORTHO05D000299 1.5e-07 60.5 40 65.0
Mapoly0061s0015 Marchantia polymorpha HOM05D002510 ORTHO05D007210 2.0e-07 60.1 50 52.0


User provided reference genes

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