Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 2.9e-88 328.6 167 100.0
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 2.9e-88 328.6 167 100.0
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 1.7e-40 169.9 158 56.3
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 4.8e-35 151.8 153 54.2
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 8.2e-35 151.0 158 52.5
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 5.3e-34 148.3 158 51.9
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 9.1e-34 147.5 153 52.9
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 1.2e-33 147.1 161 47.2
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 3.4e-33 145.6 153 51.0
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 4.5e-33 145.2 157 51.0
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 5.9e-33 144.8 153 49.7
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 7.7e-33 144.4 145 55.2
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 7.7e-33 144.4 153 50.3
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.3e-32 143.7 153 50.3
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 3.8e-32 142.1 153 49.7
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 5.0e-32 141.7 153 49.7
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 6.5e-32 141.4 153 51.6
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 6.5e-32 141.4 154 49.4
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 8.5e-32 141.0 153 50.3
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 8.5e-32 141.0 154 53.9
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.4e-31 140.2 149 48.3
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.9e-31 139.8 153 48.4
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.9e-31 139.8 153 48.4
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 1.9e-31 139.8 153 49.7
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 1.9e-31 139.8 149 46.3
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 1.9e-31 139.8 154 48.7
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 4.2e-31 138.7 135 55.6
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 4.2e-31 138.7 147 48.3
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 4.2e-31 138.7 154 49.4
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 5.5e-31 138.3 153 47.7
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 5.5e-31 138.3 154 50.0
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 5.5e-31 138.3 149 50.3
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 9.4e-31 137.5 146 52.1
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 9.4e-31 137.5 153 50.3
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 1.2e-30 137.1 149 51.0
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 1.2e-30 137.1 153 49.0
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 1.2e-30 137.1 146 49.3
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 2.1e-30 136.3 151 48.3
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.1e-30 136.3 151 48.3
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 2.1e-30 136.3 164 47.6
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 3.6e-30 135.6 153 48.4
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 3.6e-30 135.6 153 47.1
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 3.6e-30 135.6 153 49.7
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 4.7e-30 135.2 153 48.4
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 4.7e-30 135.2 153 48.4
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 4.7e-30 135.2 151 47.7
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 4.7e-30 135.2 153 49.7
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 6.1e-30 134.8 142 54.2
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 1.0e-29 134.0 149 48.3
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 1.4e-29 133.7 156 47.4
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 1.8e-29 133.3 151 49.0
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 1.8e-29 133.3 153 47.1
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 2.3e-29 132.9 146 50.7
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 3.0e-29 132.5 151 46.4
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 3.0e-29 132.5 151 45.0
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 3.0e-29 132.5 153 47.1
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 3.9e-29 132.1 151 45.7
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 3.9e-29 132.1 151 45.7
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 3.9e-29 132.1 153 47.7
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 3.9e-29 132.1 149 45.6
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 5.1e-29 131.7 153 49.0
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 1.1e-28 130.6 149 44.3
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 1.1e-28 130.6 153 47.7
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 1.1e-28 130.6 153 47.7
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.5e-28 130.2 149 43.6
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 2.0e-28 129.8 153 47.7
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 3.3e-28 129.0 146 45.2
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 4.4e-28 128.6 155 45.2
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 4.4e-28 128.6 153 44.4
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 9.7e-28 127.5 149 43.6
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 1.3e-27 127.1 151 45.0
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 1.3e-27 127.1 151 45.0
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 2.2e-27 126.3 156 44.9
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 2.2e-27 126.3 156 44.9
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 3.7e-27 125.6 153 47.1
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.8e-26 123.2 149 40.9
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 4.1e-26 122.1 158 43.7
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 4.5e-25 118.6 153 46.4
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 5.9e-25 118.2 147 46.3
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 1.7e-24 116.7 154 43.5
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 2.9e-24 115.9 153 43.1
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 6.5e-24 114.8 156 43.6
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 8.5e-24 114.4 143 47.6
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 1.9e-23 113.2 135 48.9
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 1.2e-22 110.5 223 34.1
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.1e-22 109.8 151 42.4
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.1e-22 109.8 158 40.5
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 2.1e-22 109.8 112 53.6
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 8.0e-22 107.8 153 43.1
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.8e-21 106.7 151 41.1
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 6.7e-21 104.8 132 45.5
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 8.8e-21 104.4 198 35.9
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 8.8e-21 104.4 104 53.8
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 9.7e-20 100.9 152 39.5
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.7e-19 100.1 112 50.9
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 4.8e-19 98.6 85 62.4
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 7.7e-17 91.3 153 38.6
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 7.7e-17 91.3 157 38.2
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 2.9e-16 89.4 86 57.0
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 3.8e-16 89.0 140 40.0
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 1.9e-15 86.7 100 49.0
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 1.2e-14 84.0 158 32.9
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 2.7e-14 82.8 96 52.1
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.0e-13 80.9 68 60.3
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.4e-13 80.5 134 37.3
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 2.3e-13 79.7 162 35.8
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 2.3e-13 79.7 144 37.5
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.3e-13 79.7 134 37.3
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 1.2e-12 77.4 135 36.3
PGR142G0681 Punica granatum HOM05D004498 ORTHO05D005300 4.4e-12 75.5 75 54.7
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.7e-11 73.6 134 37.3
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 2.2e-11 73.2 77 54.5
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 2.2e-11 73.2 94 43.6
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 6.3e-11 71.6 98 40.8
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 1.1e-10 70.9 80 45.0
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 1.8e-10 70.1 101 38.6
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 5.3e-10 68.6 66 56.1
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 5.3e-10 68.6 63 55.6
Rhsim07G0010100 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.6e-09 67.0 80 50.0
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 1.6e-09 67.0 81 44.4
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.0e-09 66.6 124 33.1
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 4.5e-09 65.5 57 59.6
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 5.9e-09 65.1 78 50.0
SalBow8G0163 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.9e-08 62.8 56 55.4
SalBow8G4260 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.9e-08 62.8 56 55.4
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 5.0e-08 62.0 57 57.9
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 8.5e-08 61.2 79 36.7
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 1.5e-07 60.5 109 35.8
CSS0021260 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 4.2e-07 58.9 55 58.2
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 1.6e-06 57.0 69 50.7
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 1.6e-06 57.0 61 50.8


User provided reference genes

Program Settings