Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20546 Sequoiadendron giganteum HOM05D004094 ORTHO05D004601 3.8e-235 817.8 403 100.0
ATR0684G176 Amborella trichopoda HOM05D004094 ORTHO05D004601 1.6e-31 141.4 342 31.9
MBI03_g47843_MAGBIO Magnolia biondii HOM05D004094 ORTHO05D004601 6.0e-31 139.4 319 34.2
Nn1g08759 Nelumbo nucifera HOM05D004094 ORTHO05D004601 5.0e-30 136.3 336 30.1
CSS0004297 Camellia sinensis var. sinensis HOM05D004094 ORTHO05D004601 3.6e-28 130.2 354 31.1
TAR625G0515 Trochodendron aralioides HOM05D004094 ORTHO05D004601 4.7e-28 129.8 325 28.9
Cpa.g.sc36.56 Carica papaya HOM05D004094 ORTHO05D004601 6.8e-27 125.9 309 32.0
Hund16854 Selenicereus undatus HOM05D004094 ORTHO05D004601 2.0e-26 124.4 330 30.0
QL09p035258 Quercus lobata HOM05D004094 ORTHO05D004601 2.6e-26 124.0 328 30.2
Thecc.08G123800 Theobroma cacao HOM05D004094 ORTHO05D004601 9.8e-26 122.1 312 33.0
CiPaw.05G222800 Carya illinoinensis HOM05D004094 ORTHO05D004601 2.2e-25 120.9 317 28.4
Manes.02G162400 Manihot esculenta HOM05D004094 ORTHO05D004601 2.2e-25 120.9 319 30.1
Glyma.04G250200 Glycine max HOM05D004094 ORTHO05D004601 6.4e-25 119.4 333 27.9
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 6.4e-25 119.4 332 29.8
Cfa016008 Carpinus fangiana HOM05D004094 ORTHO05D004601 8.3e-25 119.0 322 28.6
Haze_00454 Corylus avellana HOM05D004094 ORTHO05D004601 2.4e-24 117.5 307 28.3
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 4.1e-24 116.7 329 28.3
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 9.2e-24 115.5 335 29.3
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 1.2e-23 115.2 326 30.4
Glyma.06G112600 Glycine max HOM05D004094 ORTHO05D004601 1.2e-23 115.2 320 29.7
EL10Ac1g01050 Beta vulgaris HOM05D004094 ORTHO05D004601 2.1e-23 114.4 331 28.1
ECA234G0673 Erigeron canadensis HOM05D004094 ORTHO05D004601 2.1e-23 114.4 305 31.5
BcaB05g25063 Brassica carinata HOM05D004094 ORTHO05D004601 3.5e-23 113.6 317 29.3
AUR62027887 Chenopodium quinoa HOM05D004094 ORTHO05D004601 3.5e-23 113.6 338 29.3
THA.LOC104800189 Tarenaya hassleriana HOM05D004094 ORTHO05D004601 3.5e-23 113.6 351 27.4
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 6.0e-23 112.8 324 27.2
Aqoxy6G00193 Aquilegia oxysepala HOM05D004094 ORTHO05D004601 7.8e-23 112.5 329 27.4
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 7.8e-23 112.5 334 27.8
Phvul.009G124500 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 7.8e-23 112.5 332 30.7
Ciclev10000067m.g Citrus clementina HOM05D004094 ORTHO05D004601 1.3e-22 111.7 302 28.1
CsaV3_4G028330 Cucumis sativus L. HOM05D004094 ORTHO05D004601 2.3e-22 110.9 308 29.2
Cc00_g04280 Coffea canephora HOM05D004094 ORTHO05D004601 3.0e-22 110.5 313 29.1
Duzib041G0387 Durio zibethinus HOM05D004094 ORTHO05D004601 3.0e-22 110.5 321 30.5
Duzib093G2002 Durio zibethinus HOM05D004094 ORTHO05D004601 3.0e-22 110.5 334 27.5
HPP92_002183 Vanilla planifolia HOM05D004094 ORTHO05D004601 3.0e-22 110.5 324 31.2
Rhsim06G0104600 Rhododendron simsii HOM05D004094 ORTHO05D004601 5.0e-22 109.8 322 28.6
ClCG11G015680 Citrullus lanatus HOM05D004094 ORTHO05D004601 6.6e-22 109.4 316 27.2
AagrBONN_evm.TU.Sc2ySwM_368.377 Anthoceros agrestis HOM05D004094 ORTHO05D004601 8.6e-22 109.0 316 29.7
SalBow7G0426 Salvia bowleyana HOM05D004094 ORTHO05D004601 1.1e-21 108.6 306 31.0
TPR.G24027 Trifolium pratense HOM05D004094 ORTHO05D004601 1.1e-21 108.6 342 26.3
PSO170G3655 Papaver somniferum HOM05D004094 ORTHO05D004601 1.5e-21 108.2 329 30.1
arahy.Tifrunner.gnm1.ann1.1LZC07 Arachis hypogaea HOM05D004094 ORTHO05D004601 1.9e-21 107.8 312 28.8
PGR042G1714 Punica granatum HOM05D004094 ORTHO05D004601 1.9e-21 107.8 326 27.9
Ca_15191_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 2.5e-21 107.5 342 28.7
Migut.C01138 Erythranthe guttata HOM05D004094 ORTHO05D004601 3.3e-21 107.1 345 28.4
Nitab4.5_0004044g0030 Nicotiana tabacum HOM05D004094 ORTHO05D004601 3.3e-21 107.1 331 29.0
Lalb_Chr23g0271001 Lupinus albus HOM05D004094 ORTHO05D004601 4.3e-21 106.7 328 28.7
DCAR_017419 Daucus carota HOM05D004094 ORTHO05D004601 5.6e-21 106.3 329 29.5
MELO3C010472.2 Cucumis melo HOM05D004094 ORTHO05D004601 7.3e-21 105.9 325 27.4
Lj1g0022360 Lotus japonicus HOM05D004094 ORTHO05D004601 9.5e-21 105.5 329 26.7
Sopen06g020480 Solanum pennellii HOM05D004094 ORTHO05D004601 9.5e-21 105.5 314 28.0
BcaC08g47600 Brassica carinata HOM05D004094 ORTHO05D004601 1.2e-20 105.1 330 27.0
BolC6t40183H Brassica oleracea HOM05D004094 ORTHO05D004601 1.2e-20 105.1 332 27.7
AUR62019047 Chenopodium quinoa HOM05D004094 ORTHO05D004601 1.6e-20 104.8 330 29.1
Sed0014690 Sechium edule HOM05D004094 ORTHO05D004601 2.1e-20 104.4 336 27.7
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 2.8e-20 104.0 330 28.2
arahy.Tifrunner.gnm1.ann1.WV2Q7U Arachis hypogaea HOM05D004094 ORTHO05D004601 3.6e-20 103.6 339 27.7
C06p51630 Brassica napus HOM05D004094 ORTHO05D004601 3.6e-20 103.6 327 26.9
Medtr3g072400 Medicago truncatula HOM05D004094 ORTHO05D004601 3.6e-20 103.6 340 27.9
PSO782G4804 Papaver somniferum HOM05D004094 ORTHO05D004601 4.7e-20 103.2 332 29.8
Lj1g0018898 Lotus japonicus HOM05D004094 ORTHO05D004601 6.2e-20 102.8 328 29.9
Nitab4.5_0000633g0220 Nicotiana tabacum HOM05D004094 ORTHO05D004601 6.2e-20 102.8 328 29.0
DCAR_014092 Daucus carota HOM05D004094 ORTHO05D004601 8.1e-20 102.4 318 27.0
MSTRG.1451 Avicennia marina HOM05D004094 ORTHO05D004601 1.4e-19 101.7 332 25.9
Gohir.A06G043800 Gossypium hirsutum HOM05D004094 ORTHO05D004601 1.4e-19 101.7 323 28.2
Lalb_Chr04g0253401 Lupinus albus HOM05D004094 ORTHO05D004601 1.8e-19 101.3 320 24.1
TWI12G0492 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 1.8e-19 101.3 336 27.1
TPR.G25784 Trifolium pratense HOM05D004094 ORTHO05D004601 2.3e-19 100.9 348 27.0
CANSAT64G2400 Cannabis sativa HOM05D004094 ORTHO05D004601 4.0e-19 100.1 318 29.6
Psat5g131960 Pisum sativum HOM05D004094 ORTHO05D004601 4.0e-19 100.1 334 26.6
Potri.005G177000 Populus trichocarpa HOM05D004094 ORTHO05D004601 6.8e-19 99.4 314 28.3
Sc01g0001180 Simmondsia chinensis HOM05D004094 ORTHO05D004601 8.9e-19 99.0 320 27.2
Ca_12613_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 1.5e-18 98.2 336 26.8
Gorai.010G049800 Gossypium raimondii HOM05D004094 ORTHO05D004601 1.5e-18 98.2 325 28.6
Gohir.D06G044700 Gossypium hirsutum HOM05D004094 ORTHO05D004601 4.4e-18 96.7 322 27.6
Lsat_1_v5_gn_5_126560 Lactuca sativa HOM05D004094 ORTHO05D004601 4.4e-18 96.7 321 27.4
Medtr1g030410 Medicago truncatula HOM05D004094 ORTHO05D004601 4.4e-18 96.7 334 26.3
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 1.3e-17 95.1 330 25.5
Potri.002G084700 Populus trichocarpa HOM05D004094 ORTHO05D004601 1.3e-17 95.1 322 27.3
Sabra02G0066100 Salix brachista HOM05D004094 ORTHO05D004601 1.7e-17 94.7 321 26.2
unitig_26.g9911 Utricularia gibba HOM05D004094 ORTHO05D004601 2.9e-17 94.0 297 26.9
Prupe.1G499900 Prunus persica HOM05D004094 ORTHO05D004601 4.9e-17 93.2 328 25.0
HanXRQChr10g0304931 Helianthus annuus HOM05D004094 ORTHO05D004601 6.4e-17 92.8 316 27.2
Psat6g041960 Pisum sativum HOM05D004094 ORTHO05D004601 8.3e-17 92.4 352 27.0
Glyma.14G148700 Glycine max HOM05D004094 ORTHO05D004601 1.1e-16 92.0 321 26.8
MD15G1351000 Malus domestica HOM05D004094 ORTHO05D004601 1.1e-16 92.0 329 26.1
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 3.2e-16 90.5 326 25.2
RcHm_v2.0_Chr6g0295641 Rosa chinensis HOM05D004094 ORTHO05D004601 3.2e-16 90.5 336 27.7
Solyc06g060350.4 Solanum lycopersicum HOM05D004094 ORTHO05D004601 7.1e-16 89.4 301 28.2
Sc23g0000720 Simmondsia chinensis HOM05D004094 ORTHO05D004601 9.2e-16 89.0 327 25.4
Actinidia02613 Actinidia chinensis HOM05D004094 ORTHO05D004601 1.6e-15 88.2 140 35.0
VMungo1309G1727 Vigna mungo HOM05D004094 ORTHO05D004601 1.6e-15 88.2 297 25.6
Actinidia23072 Actinidia chinensis HOM05D004094 ORTHO05D004601 2.1e-15 87.8 339 26.5
Mapoly0007s0100 Marchantia polymorpha HOM05D004094 ORTHO05D004601 3.5e-15 87.0 342 29.5
VMungo0647G1825 Vigna mungo HOM05D004094 ORTHO05D004601 3.5e-15 87.0 321 26.5
FvH4_2g26770 Fragaria vesca HOM05D004094 ORTHO05D004601 4.6e-15 86.7 330 27.0
FAN24G0267 Fragaria x ananassa HOM05D004094 ORTHO05D004601 4.6e-15 86.7 330 27.0
arahy.Tifrunner.gnm1.ann1.3295S8 Arachis hypogaea HOM05D004094 ORTHO05D004601 6.0e-15 86.3 326 24.8
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 7.8e-15 85.9 133 34.6
SGA_v2.0_scaffold24G10467 Striga asiatica HOM05D004094 ORTHO05D004601 1.3e-14 85.1 321 27.7
CDE06G1261 Ceratophyllum demersum HOM05D004094 ORTHO05D004601 3.9e-14 83.6 312 28.5
FAN20G0223 Fragaria x ananassa HOM05D004094 ORTHO05D004601 3.9e-14 83.6 330 27.3
BcaC03g15753 Brassica carinata HOM05D004094 ORTHO05D004601 5.1e-14 83.2 108 38.9
Sed0015071 Sechium edule HOM05D004094 ORTHO05D004601 5.1e-14 83.2 311 27.7
Ca_14821_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 6.6e-14 82.8 327 25.7
FAN15G0810 Fragaria x ananassa HOM05D004094 ORTHO05D004601 8.6e-14 82.4 324 27.8
TWI36G0013 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 1.5e-13 81.6 280 25.7
Hma1.2p1_0186F.1_g081720 Hydrangea macrophylla HOM05D004094 ORTHO05D004601 1.9e-13 81.3 110 40.0
Pp3c13_19570 Physcomitrium patens HOM05D004094 ORTHO05D004601 1.9e-13 81.3 361 26.3
Dinv07237 Davidia involucrata HOM05D004094 ORTHO05D004601 2.5e-13 80.9 319 25.7
COL.COLO4_35941 Corchorus olitorius HOM05D004094 ORTHO05D004601 3.3e-13 80.5 86 39.5
Peaxi162Scf00051g00911 Petunia axillaris HOM05D004094 ORTHO05D004601 4.3e-13 80.1 311 24.4
vmacro12538 Vaccinium macrocarpon HOM05D004094 ORTHO05D004601 5.6e-13 79.7 381 24.1
Oeu047946.1 Olea europaea HOM05D004094 ORTHO05D004601 2.1e-12 77.8 235 28.9
Sabra05G0133600 Salix brachista HOM05D004094 ORTHO05D004601 2.8e-12 77.4 389 23.4
BolC2t09507H Brassica oleracea HOM05D004094 ORTHO05D004601 4.7e-12 76.6 104 36.5
Os03g0262300 Oryza sativa ssp. japonica HOM05D004094 ORTHO05D004601 1.4e-11 75.1 311 25.4
arahy.Tifrunner.gnm1.ann1.HK9WB5 Arachis hypogaea HOM05D004094 ORTHO05D004601 3.1e-11 73.9 332 23.2
Pp3c12_8350 Physcomitrium patens HOM05D004094 ORTHO05D004601 8.9e-11 72.4 357 25.2
TWI77G0135 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 8.9e-11 72.4 129 34.9
Zm00001eb398150 Zea mays HOM05D004094 ORTHO05D004601 1.2e-10 72.0 322 25.8
Psat3g082880 Pisum sativum HOM05D004094 ORTHO05D004601 3.4e-10 70.5 135 31.1
GSVIVG01008880001 Vitis vinifera HOM05D004094 ORTHO05D004601 3.4e-10 70.5 86 41.9
Psat1g217360 Pisum sativum HOM05D004094 ORTHO05D004601 1.7e-09 68.2 130 31.5
Phvul.008G163600 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 1.4e-08 65.1 111 31.5
Lj7A339T40 Lonicera japonica HOM05D004094 ORTHO05D004601 1.9e-08 64.7 73 38.4
BraA02t07168Z Brassica rapa HOM05D004094 ORTHO05D004601 2.1e-07 61.2 87 34.5
C02p34910 Brassica napus HOM05D004094 ORTHO05D004601 4.6e-07 60.1 87 34.5
Cfa003011 Carpinus fangiana HOM05D004094 ORTHO05D004601 8.7e-06 55.8 43 53.5


User provided reference genes

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