Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20533 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 2.1e-230 802.0 397 100.0
SMO367G0229 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 3.0e-51 206.8 221 48.9
Mapoly0044s0119 Marchantia polymorpha HOM05D003515 ORTHO05D004347 1.2e-47 194.9 221 47.1
CBR_g20120 Chara braunii HOM05D003515 ORTHO05D004347 5.7e-42 176.0 289 38.8
MCO16G582 Micromonas commoda HOM05D003515 ORTHO05D004347 5.0e-38 162.9 232 39.2
Cre03.g148050 Chlamydomonas reinhardtii HOM05D003515 ORTHO05D004347 4.3e-34 149.8 253 35.6
PRCOL_00007000 Prasinoderma coloniale HOM05D003515 ORTHO05D004347 1.4e-24 118.2 117 47.9
Cfa025287 Carpinus fangiana HOM05D003515 ORTHO05D004347 5.3e-24 116.3 225 32.9
AagrBONN_evm.TU.Sc2ySwM_117.2476 Anthoceros agrestis HOM05D003515 ORTHO05D004347 7.7e-23 112.5 162 42.0
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 1.3e-22 111.7 239 32.2
unitig_748.g8071 Utricularia gibba HOM05D003515 ORTHO05D004347 2.2e-22 110.9 240 34.2
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 2.9e-22 110.5 239 31.8
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 3.8e-22 110.2 239 32.2
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 8.5e-22 109.0 239 32.6
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 8.5e-22 109.0 239 32.6
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 1.1e-21 108.6 241 32.8
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.2e-21 107.1 239 31.0
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 4.2e-21 106.7 239 32.2
AagrBONN_evm.TU.Sc2ySwM_228.4437 Anthoceros agrestis HOM05D003515 ORTHO05D004347 5.5e-21 106.3 240 31.2
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 7.2e-21 105.9 239 32.2
SEGI_02016 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 7.2e-21 105.9 239 33.5
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 1.2e-20 105.1 239 32.2
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 1.2e-20 105.1 239 32.2
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 1.6e-20 104.8 239 31.0
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 2.1e-20 104.4 239 31.0
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 2.1e-20 104.4 260 29.6
CBR_g30567 Chara braunii HOM05D003515 ORTHO05D004347 3.6e-20 103.6 234 29.9
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 3.6e-20 103.6 239 32.2
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 4.7e-20 103.2 242 32.2
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 4.7e-20 103.2 239 31.0
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 4.7e-20 103.2 239 31.0
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 4.7e-20 103.2 239 32.2
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 6.1e-20 102.8 239 31.8
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 7.9e-20 102.4 241 30.7
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 1.0e-19 102.1 239 31.8
Hma1.2p1_0088F.1_g045243 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 1.0e-19 102.1 234 31.6
CARHR178160 Cardamine hirsuta HOM05D003515 ORTHO05D004347 1.4e-19 101.7 239 30.5
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 1.8e-19 101.3 240 30.4
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 1.8e-19 101.3 239 31.4
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 2.3e-19 100.9 238 32.4
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 2.3e-19 100.9 239 32.2
Gohir.A05G245600 Gossypium hirsutum HOM05D003515 ORTHO05D004347 3.0e-19 100.5 240 30.4
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 3.0e-19 100.5 239 30.5
Nitab4.5_0003190g0020 Nicotiana tabacum HOM05D003515 ORTHO05D004347 3.9e-19 100.1 238 30.7
Sp2g09580 Schrenkiella parvula HOM05D003515 ORTHO05D004347 3.9e-19 100.1 238 30.7
Sopen01g017810 Solanum pennellii HOM05D003515 ORTHO05D004347 3.9e-19 100.1 238 30.3
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 5.1e-19 99.8 241 30.3
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 5.1e-19 99.8 239 33.5
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 5.1e-19 99.8 240 30.4
Nitab4.5_0000254g0140 Nicotiana tabacum HOM05D003515 ORTHO05D004347 5.1e-19 99.8 238 31.1
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 8.8e-19 99.0 240 32.9
Pp3c8_17250 Physcomitrium patens HOM05D003515 ORTHO05D004347 8.8e-19 99.0 233 31.8
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 8.8e-19 99.0 239 31.0
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 1.1e-18 98.6 241 29.9
Mapoly0100s0031 Marchantia polymorpha HOM05D003515 ORTHO05D004347 1.5e-18 98.2 238 28.6
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 1.5e-18 98.2 238 31.5
AT5G44740 Arabidopsis thaliana HOM05D003515 ORTHO05D004347 2.6e-18 97.4 239 29.7
Hma1.2p1_0088F.1_g045246 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 2.6e-18 97.4 234 30.8
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 2.6e-18 97.4 239 30.5
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 3.3e-18 97.1 239 31.0
CsaV3_6G052970 Cucumis sativus L. HOM05D003515 ORTHO05D004347 3.3e-18 97.1 238 32.4
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 4.4e-18 96.7 239 28.9
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 4.4e-18 96.7 243 29.6
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 4.4e-18 96.7 243 29.6
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 4.4e-18 96.7 239 29.7
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 4.4e-18 96.7 239 30.1
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 5.7e-18 96.3 232 31.0
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 7.4e-18 95.9 239 29.7
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 7.4e-18 95.9 233 30.9
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 9.7e-18 95.5 243 30.5
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 9.7e-18 95.5 243 30.5
AUR62040332 Chenopodium quinoa HOM05D003515 ORTHO05D004347 9.7e-18 95.5 233 29.6
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 9.7e-18 95.5 233 30.9
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 9.7e-18 95.5 233 29.2
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 1.3e-17 95.1 239 29.7
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 1.7e-17 94.7 232 30.6
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 1.7e-17 94.7 232 30.6
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 2.2e-17 94.4 232 31.5
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 2.2e-17 94.4 235 29.4
AL8G14790 Arabidopsis lyrata HOM05D003515 ORTHO05D004347 3.7e-17 93.6 234 29.9
CSS0046591 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.7e-17 93.6 294 28.2
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 3.7e-17 93.6 252 29.0
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 4.8e-17 93.2 122 42.6
SMO118G0165 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 4.8e-17 93.2 232 30.6
HPP92_026459 Vanilla planifolia HOM05D003515 ORTHO05D004347 4.8e-17 93.2 276 28.3
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 6.3e-17 92.8 233 29.6
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 6.3e-17 92.8 302 27.2
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 8.2e-17 92.4 239 29.3
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 1.4e-16 91.7 238 30.7
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 1.8e-16 91.3 237 30.0
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 7.0e-16 89.4 317 25.6
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 9.1e-16 89.0 232 29.7
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 9.1e-16 89.0 234 30.3
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 9.1e-16 89.0 122 38.5
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 1.5e-15 88.2 258 28.3
BcaNung06821 Brassica carinata HOM05D003515 ORTHO05D004347 3.5e-15 87.0 249 28.9
Cpa.g.sc30.112 Carica papaya HOM05D003515 ORTHO05D004347 3.5e-15 87.0 130 36.2
MSTRG.2877 Avicennia marina HOM05D003515 ORTHO05D004347 4.5e-15 86.7 125 37.6
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 5.9e-15 86.3 227 29.5
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.0e-14 85.5 122 37.7
MCO03G362 Micromonas commoda HOM05D003515 ORTHO05D004347 1.3e-14 85.1 226 28.8
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 5.0e-14 83.2 218 29.8
Pp3c14_23660 Physcomitrium patens HOM05D003515 ORTHO05D004347 1.9e-13 81.3 256 27.0
PGSC0003DMG401001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 5.5e-13 79.7 275 26.2
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 7.2e-13 79.3 234 28.6
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 1.6e-12 78.2 277 26.0
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 2.1e-12 77.8 221 30.3
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.6e-12 77.0 218 29.8
CSS0028889 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.7e-12 76.6 214 28.5
Cre12.g524150 Chlamydomonas reinhardtii HOM05D003515 ORTHO05D004347 1.8e-11 74.7 153 31.4
HanXRQChr14g0439691 Helianthus annuus HOM05D003515 ORTHO05D004347 3.0e-11 73.9 165 30.9
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.2e-11 73.2 229 27.9
FvH4_2g04350 Fragaria vesca HOM05D002857 ORTHO05D007919 1.1e-10 72.0 119 32.8
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 3.3e-10 70.5 223 29.1
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 4.4e-10 70.1 221 28.1
ClCG02G006830 Citrullus lanatus HOM05D002857 ORTHO05D007919 1.7e-09 68.2 115 34.8
Cre12.g550800 Chlamydomonas reinhardtii HOM05D004852 ORTHO05D006128 4.8e-09 66.6 112 31.2
ATR1153G103 Amborella trichopoda HOM05D002857 ORTHO05D007919 2.4e-08 64.3 117 32.5
CDE04G2933 Ceratophyllum demersum HOM05D002857 ORTHO05D007919 2.4e-08 64.3 118 31.4
Os03g0616300 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D007919 2.4e-08 64.3 133 29.3
SEGI_11563 Sequoiadendron giganteum HOM05D002857 ORTHO05D007919 5.3e-08 63.2 121 32.2
SEGI_21332 Sequoiadendron giganteum HOM05D004373 ORTHO05D005203 9.1e-08 62.4 53 56.6
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 3.5e-07 60.5 174 31.0
Cre07.g338602 Chlamydomonas reinhardtii HOM05D003515 ORTHO05D004347 7.7e-07 59.3 73 35.6
Zm00001eb070690 Zea mays HOM05D003515 ORTHO05D004347 7.7e-07 59.3 234 25.2
SEGI_39660 Sequoiadendron giganteum HOM05D004852 ORTHO05D006128 1.3e-06 58.5 120 26.7
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 2.2e-06 57.8 173 27.7
TPR.G8313 Trifolium pratense HOM05D002857 ORTHO05D007919 5.0e-06 56.6 70 35.7
Zm00001eb277800 Zea mays HOM05D003515 ORTHO05D004347 5.0e-06 56.6 174 28.2


User provided reference genes

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